RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CEP95Q96GE4 821 aa23.63■■□□□ 1.37
TSPAN3-210ENST00000561277 TRIM47Q96LD4 638 aa23.63■■□□□ 1.37
TSPAN3-210ENST00000561277 TANGO6Q9C0B7 1094 aa23.63■■□□□ 1.37
TSPAN3-210ENST00000561277 VCPKMTQ9H867 229 aa23.63■■□□□ 1.37
TSPAN3-210ENST00000561277 PLIN4Q96Q06 1357 aa23.62■■□□□ 1.37
TSPAN3-210ENST00000561277 FAM110CQ1W6H9 321 aa23.62■■□□□ 1.37
TSPAN3-210ENST00000561277 RRP12Q5JTH9 1297 aaKnown RBP23.62■■□□□ 1.37
TSPAN3-210ENST00000561277 CATSPERGQ6ZRH7 1159 aa23.62■■□□□ 1.37
TSPAN3-210ENST00000561277 LPAR1Q92633 364 aa23.62■■□□□ 1.37
TSPAN3-210ENST00000561277 DSCC1Q9BVC3 393 aa23.62■■□□□ 1.37
TSPAN3-210ENST00000561277 IGKV6D-41A0A0C4DH26 115 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 RANBP6O60518 1105 aaKnown RBP23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 PEX10O60683 326 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 NEDD1Q8NHV4 660 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 NBPF3Q9H094 633 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 CLIP2Q9UDT6 1046 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 HPS5Q9UPZ3 1129 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 ZNF213O14771 459 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 IFFO2Q5TF58 517 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 TBC1D10CQ8IV04 446 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 PAGR1Q9BTK6 254 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 GOPCQ9HD26 462 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 MTMR4Q9NYA4 1195 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 NYAP2Q9P242 653 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 PTPN22Q9Y2R2 807 aa23.61■■□□□ 1.37
TSPAN3-210ENST00000561277 LAMA4Q16363 1823 aa23.6■■□□□ 1.37
TSPAN3-210ENST00000561277 FCGRTP55899 365 aa23.6■■□□□ 1.37
TSPAN3-210ENST00000561277 BMP2KLQ5H9B9 411 aa23.6■■□□□ 1.37
TSPAN3-210ENST00000561277 TXNRD2Q9NNW7 524 aa23.6■■□□□ 1.37
TSPAN3-210ENST00000561277 CCDC85CA6NKD9 419 aa23.59■■□□□ 1.37
TSPAN3-210ENST00000561277 ORC4O43929 436 aa23.59■■□□□ 1.37
TSPAN3-210ENST00000561277 TTLL1O95922 423 aa23.59■■□□□ 1.37
TSPAN3-210ENST00000561277 LRRC47Q8N1G4 583 aaKnown RBP23.59■■□□□ 1.37
TSPAN3-210ENST00000561277 PPP4R2Q9NY27 417 aa23.59■■□□□ 1.37
TSPAN3-210ENST00000561277 MYH4Q9Y623 1939 aa23.59■■□□□ 1.37
TSPAN3-210ENST00000561277 MGAMO43451 1857 aa23.58■■□□□ 1.37
TSPAN3-210ENST00000561277 AKNAD1Q5T1N1 836 aa23.58■■□□□ 1.37
TSPAN3-210ENST00000561277 SAMD1Q6SPF0 538 aaPredicted RBP23.58■■□□□ 1.37
TSPAN3-210ENST00000561277 GTF3C2Q8WUA4 911 aaPredicted RBP23.58■■□□□ 1.37
TSPAN3-210ENST00000561277 RBPJLQ9UBG7 517 aa23.58■■□□□ 1.37
TSPAN3-210ENST00000561277 MORF4L1Q9UBU8 362 aa23.58■■□□□ 1.37
TSPAN3-210ENST00000561277 TNPO2O14787 897 aaKnown RBP23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 WDR46O15213 610 aaKnown RBP23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 SGSM2O43147 1006 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 NMT2O60551 498 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 GNRH1P01148 92 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 FGRP09769 529 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 ERICH6BQ5W0A0 696 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 POTEEQ6S8J3 1075 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 MFSD6Q6ZSS7 791 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 GPRC5AQ8NFJ5 357 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 STAG1Q8WVM7 1258 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 CTNNA3Q9UI47 895 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 STX8Q9UNK0 236 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 PTCH2Q9Y6C5 1203 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 SPDYE16A6NNV3 312 aaPredicted RBP23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 FLOT1O75955 427 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 IMMTQ16891 758 aaKnown RBP23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 FAM83BQ5T0W9 1011 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 RNF41Q9H4P4 317 aaPredicted RBP23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 SRRDQ9UH36 339 aa23.57■■□□□ 1.36
TSPAN3-210ENST00000561277 F5H6K3 240 aa23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 NDUFB10O96000 172 aa23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 HOXD10P28358 340 aa23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 ERVK-9P63128 1117 aa23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 ERVK-24P63145 666 aa23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 PTH1RQ03431 593 aa23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 KLRC3Q07444 240 aa23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 COG2Q14746 738 aa23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 NUP88Q99567 741 aaPredicted RBP23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 IL17RBQ9NRM6 502 aa23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 NEDD4P46934 1319 aa23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 MYPNQ86TC9 1320 aa23.56■■□□□ 1.36
TSPAN3-210ENST00000561277 PRKCZQ05513 592 aa23.55■■□□□ 1.36
TSPAN3-210ENST00000561277 PCP11498 1178 aaKnown RBP23.54■■□□□ 1.36
TSPAN3-210ENST00000561277 Q3C1V9 767 aa23.54■■□□□ 1.36
TSPAN3-210ENST00000561277 MKL1Q969V6 931 aa23.54■■□□□ 1.36
TSPAN3-210ENST00000561277 HOXC10Q9NYD6 342 aa23.54■■□□□ 1.36
TSPAN3-210ENST00000561277 RABGAP1Q9Y3P9 1069 aa23.54■■□□□ 1.36
TSPAN3-210ENST00000561277 CNMDO75829 334 aa23.53■■□□□ 1.36
TSPAN3-210ENST00000561277 PRMT2P55345 433 aa23.53■■□□□ 1.36
TSPAN3-210ENST00000561277 PPP4R3BQ5MIZ7 849 aa23.53■■□□□ 1.36
TSPAN3-210ENST00000561277 LBX2Q6XYB7 198 aa23.53■■□□□ 1.36
TSPAN3-210ENST00000561277 NKX2-3Q8TAU0 364 aa23.53■■□□□ 1.36
TSPAN3-210ENST00000561277 RAET1EQ8TD07 263 aa23.53■■□□□ 1.36
TSPAN3-210ENST00000561277 COA7Q96BR5 231 aa23.53■■□□□ 1.36
TSPAN3-210ENST00000561277 CHMP4CQ96CF2 233 aa23.53■■□□□ 1.36
TSPAN3-210ENST00000561277 ATG4CQ96DT6 458 aa23.53■■□□□ 1.36
TSPAN3-210ENST00000561277 FBXO28Q9NVF7 368 aa23.53■■□□□ 1.36
TSPAN3-210ENST00000561277 GABRQQ9UN88 632 aa23.53■■□□□ 1.36
TSPAN3-210ENST00000561277 DSG3P32926 999 aa23.52■■□□□ 1.36
TSPAN3-210ENST00000561277 CCAR1Q8IX12 1150 aaKnown RBP23.52■■□□□ 1.36
TSPAN3-210ENST00000561277 ESR2Q92731 530 aa23.52■■□□□ 1.36
TSPAN3-210ENST00000561277 BTBD7Q9P203 1132 aa23.52■■□□□ 1.36
TSPAN3-210ENST00000561277 ISY1Q9ULR0 285 aaKnown RBP23.52■■□□□ 1.36
TSPAN3-210ENST00000561277 RLFQ13129 1914 aa23.52■■□□□ 1.36
TSPAN3-210ENST00000561277 SLC9C1Q4G0N8 1177 aa23.52■■□□□ 1.36
TSPAN3-210ENST00000561277 GMCL1P1Q8NEA9 526 aa23.52■■□□□ 1.36
TSPAN3-210ENST00000561277 ESYT1Q9BSJ8 1104 aa23.52■■□□□ 1.36
TSPAN3-210ENST00000561277 PORCNQ9H237 461 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms