RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 TMX2Q9Y320 296 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 GJA8P48165 433 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 PDE1AP54750 535 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 UBXN2AP68543 259 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 GIMAP6Q6P9H5 292 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 CCDC129Q6ZRS4 1044 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 GPR142Q7Z601 462 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 UBE2Q1Q7Z7E8 422 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 AMOTL1Q8IY63 956 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 SPICE1Q8N0Z3 855 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 USP6NLQ92738 828 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 DDRGK1Q96HY6 314 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 CCDC17Q96LX7 622 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 RABGAP1Q9Y3P9 1069 aa16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 SUPT16HQ9Y5B9 1047 aaKnown RBP16.79■□□□□ 0.28
TNFAIP2-207ENST00000560562 ZNF236Q9UL36 1845 aa16.78■□□□□ 0.28
TNFAIP2-207ENST00000560562 MINDY4BA8MYZ0 360 aa16.78■□□□□ 0.28
TNFAIP2-207ENST00000560562 EEF2P13639 858 aaKnown RBP16.78■□□□□ 0.28
TNFAIP2-207ENST00000560562 CYP2B6P20813 491 aa16.78■□□□□ 0.28
TNFAIP2-207ENST00000560562 SMC5Q8IY18 1101 aa16.78■□□□□ 0.28
TNFAIP2-207ENST00000560562 U2AF1L4Q8WU68 220 aaKnown RBP16.78■□□□□ 0.28
TNFAIP2-207ENST00000560562 GTF3C2Q8WUA4 911 aaPredicted RBP16.78■□□□□ 0.28
TNFAIP2-207ENST00000560562 LNPKQ9C0E8 428 aa16.78■□□□□ 0.28
TNFAIP2-207ENST00000560562 PAK6Q9NQU5 681 aaPredicted RBP16.78■□□□□ 0.28
TNFAIP2-207ENST00000560562 PLXNA1Q9UIW2 1896 aa16.77■□□□□ 0.27
TNFAIP2-207ENST00000560562 MAPK4P31152 587 aa16.77■□□□□ 0.27
TNFAIP2-207ENST00000560562 MORN1Q5T089 497 aa16.77■□□□□ 0.27
TNFAIP2-207ENST00000560562 IFNL3Q8IZI9 196 aa16.77■□□□□ 0.27
TNFAIP2-207ENST00000560562 VCPKMTQ9H867 229 aa16.77■□□□□ 0.27
TNFAIP2-207ENST00000560562 PATL2C9JE40 543 aaKnown RBP16.76■□□□□ 0.27
TNFAIP2-207ENST00000560562 PRDM1O75626 825 aa16.76■□□□□ 0.27
TNFAIP2-207ENST00000560562 HMGCRP04035 888 aa16.76■□□□□ 0.27
TNFAIP2-207ENST00000560562 GNAT2P19087 354 aa16.76■□□□□ 0.27
TNFAIP2-207ENST00000560562 TDO2P48775 406 aa16.76■□□□□ 0.27
TNFAIP2-207ENST00000560562 CCL14Q16627 93 aa16.76■□□□□ 0.27
TNFAIP2-207ENST00000560562 TANGO6Q9C0B7 1094 aa16.76■□□□□ 0.27
TNFAIP2-207ENST00000560562 ARHGEF10LQ9HCE6 1279 aa16.76■□□□□ 0.27
TNFAIP2-207ENST00000560562 SGPL1O95470 568 aa16.75■□□□□ 0.27
TNFAIP2-207ENST00000560562 ATP2B2Q01814 1243 aa16.75■□□□□ 0.27
TNFAIP2-207ENST00000560562 VPS53Q5VIR6 699 aa16.75■□□□□ 0.27
TNFAIP2-207ENST00000560562 B4GALNT3Q6L9W6 998 aa16.75■□□□□ 0.27
TNFAIP2-207ENST00000560562 PLEKHH3Q7Z736 793 aa16.75■□□□□ 0.27
TNFAIP2-207ENST00000560562 SOCS4Q8WXH5 440 aa16.75■□□□□ 0.27
TNFAIP2-207ENST00000560562 DEFB118Q96PH6 123 aa16.75■□□□□ 0.27
TNFAIP2-207ENST00000560562 NUDT12Q9BQG2 462 aa16.75■□□□□ 0.27
TNFAIP2-207ENST00000560562 KANSL2Q9H9L4 492 aa16.75■□□□□ 0.27
TNFAIP2-207ENST00000560562 TRIOBPQ9H2D6 2365 aa16.75■□□□□ 0.27
TNFAIP2-207ENST00000560562 IGKV6D-41A0A0C4DH26 115 aa16.74■□□□□ 0.27
TNFAIP2-207ENST00000560562 APPP05067 770 aa16.74■□□□□ 0.27
TNFAIP2-207ENST00000560562 DSG3P32926 999 aa16.74■□□□□ 0.27
TNFAIP2-207ENST00000560562 AAMPQ13685 434 aa16.74■□□□□ 0.27
TNFAIP2-207ENST00000560562 COG2Q14746 738 aa16.74■□□□□ 0.27
TNFAIP2-207ENST00000560562 LPAR1Q92633 364 aa16.74■□□□□ 0.27
TNFAIP2-207ENST00000560562 ATG4CQ96DT6 458 aa16.74■□□□□ 0.27
TNFAIP2-207ENST00000560562 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.74■□□□□ 0.27
TNFAIP2-207ENST00000560562 FBXO28Q9NVF7 368 aa16.74■□□□□ 0.27
TNFAIP2-207ENST00000560562 TACC3Q9Y6A5 838 aa16.74■□□□□ 0.27
TNFAIP2-207ENST00000560562 A0A0D9SFI3 127 aa16.73■□□□□ 0.27
TNFAIP2-207ENST00000560562 XRCC5P13010 732 aaKnown RBP16.73■□□□□ 0.27
TNFAIP2-207ENST00000560562 LRRFIP1Q32MZ4 808 aaKnown RBP16.73■□□□□ 0.27
TNFAIP2-207ENST00000560562 MAP3K21Q5TCX8 1036 aa16.73■□□□□ 0.27
TNFAIP2-207ENST00000560562 NKX2-3Q8TAU0 364 aa16.73■□□□□ 0.27
TNFAIP2-207ENST00000560562 EVI5LQ96CN4 794 aa16.73■□□□□ 0.27
TNFAIP2-207ENST00000560562 FAM227BQ96M60 508 aa16.73■□□□□ 0.27
TNFAIP2-207ENST00000560562 MOV10L1Q9BXT6 1211 aaKnown RBP16.73■□□□□ 0.27
TNFAIP2-207ENST00000560562 CRISPLD2Q9H0B8 497 aa16.73■□□□□ 0.27
TNFAIP2-207ENST00000560562 FLRT1Q9NZU1 646 aa16.73■□□□□ 0.27
TNFAIP2-207ENST00000560562 LAMA4Q16363 1823 aa16.73■□□□□ 0.27
TNFAIP2-207ENST00000560562 WDR46O15213 610 aaKnown RBP16.72■□□□□ 0.27
TNFAIP2-207ENST00000560562 FLOT1O75955 427 aa16.72■□□□□ 0.27
TNFAIP2-207ENST00000560562 MAP2K5Q13163 448 aa16.72■□□□□ 0.27
TNFAIP2-207ENST00000560562 NUP88Q99567 741 aaPredicted RBP16.72■□□□□ 0.27
TNFAIP2-207ENST00000560562 APBA2Q99767 749 aa16.72■□□□□ 0.27
TNFAIP2-207ENST00000560562 RWDD1Q9H446 243 aaPredicted RBP16.72■□□□□ 0.27
TNFAIP2-207ENST00000560562 SH2D4AQ9H788 454 aa16.72■□□□□ 0.27
TNFAIP2-207ENST00000560562 MKNK2Q9HBH9 465 aa16.72■□□□□ 0.27
TNFAIP2-207ENST00000560562 ZBTB47Q9UFB7 747 aaPredicted RBP16.72■□□□□ 0.27
TNFAIP2-207ENST00000560562 SMCHD1A6NHR9 2005 aa16.72■□□□□ 0.27
TNFAIP2-207ENST00000560562 PLIN4Q96Q06 1357 aa16.72■□□□□ 0.27
TNFAIP2-207ENST00000560562 PRKAR2AP13861 404 aaKnown RBP16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 PTPREP23469 700 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 RGS2P41220 211 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 CCNA1P78396 465 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 NUCB1Q02818 461 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 PPARAQ07869 468 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 GRB14Q14449 540 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 FAM83BQ5T0W9 1011 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 WDR78Q5VTH9 848 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 CHD1LQ86WJ1 897 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 PLEKHM2Q8IWE5 1019 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 CCAR1Q8IX12 1150 aaKnown RBP16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 DIS3LQ8TF46 1054 aaKnown RBP16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 SPATC1LQ9H0A9 340 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 NAPBQ9H115 298 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 INCENPQ9NQS7 918 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 HOXC10Q9NYD6 342 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 LAMA3Q16787 3333 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 RPTORQ8N122 1335 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 SZT2Q5T011 3432 aa16.71■□□□□ 0.27
TNFAIP2-207ENST00000560562 FARP2O94887 1054 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms