RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TMEM67Q5HYA8 995 aa19.33■□□□□ 0.69
TPM1-219ENST00000559397 ACER1Q8TDN7 264 aa19.33■□□□□ 0.69
TPM1-219ENST00000559397 GTF3C6Q969F1 213 aa19.33■□□□□ 0.69
TPM1-219ENST00000559397 WDR18Q9BV38 432 aa19.33■□□□□ 0.69
TPM1-219ENST00000559397 STX8Q9UNK0 236 aa19.33■□□□□ 0.69
TPM1-219ENST00000559397 SMC3Q9UQE7 1217 aa19.33■□□□□ 0.69
TPM1-219ENST00000559397 ZHX2Q9Y6X8 837 aa19.33■□□□□ 0.69
TPM1-219ENST00000559397 A0A1W2PRG0 241 aa19.33■□□□□ 0.68
TPM1-219ENST00000559397 MCM4P33991 863 aa19.33■□□□□ 0.68
TPM1-219ENST00000559397 ECE1P42892 770 aa19.33■□□□□ 0.68
TPM1-219ENST00000559397 WTAPQ15007 396 aa19.33■□□□□ 0.68
TPM1-219ENST00000559397 PPP4R3BQ5MIZ7 849 aa19.33■□□□□ 0.68
TPM1-219ENST00000559397 ERO1BQ86YB8 467 aa19.33■□□□□ 0.68
TPM1-219ENST00000559397 ZNF274Q96GC6 653 aaPredicted RBP19.33■□□□□ 0.68
TPM1-219ENST00000559397 TMEM47Q9BQJ4 181 aa19.33■□□□□ 0.68
TPM1-219ENST00000559397 CLIP2Q9UDT6 1046 aa19.33■□□□□ 0.68
TPM1-219ENST00000559397 AFG3L2Q9Y4W6 797 aa19.33■□□□□ 0.68
TPM1-219ENST00000559397 ERICH2A1L162 156 aa19.32■□□□□ 0.68
TPM1-219ENST00000559397 APLP1P51693 650 aa19.32■□□□□ 0.68
TPM1-219ENST00000559397 PPATQ06203 517 aa19.32■□□□□ 0.68
TPM1-219ENST00000559397 APOBRQ0VD83 1088 aa19.32■□□□□ 0.68
TPM1-219ENST00000559397 IFIT1BQ5T764 474 aaKnown RBP19.32■□□□□ 0.68
TPM1-219ENST00000559397 OPTNQ96CV9 577 aa19.32■□□□□ 0.68
TPM1-219ENST00000559397 SLC10A4Q96EP9 437 aa19.32■□□□□ 0.68
TPM1-219ENST00000559397 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.32■□□□□ 0.68
TPM1-219ENST00000559397 TOP1P11387 765 aaKnown RBP19.31■□□□□ 0.68
TPM1-219ENST00000559397 GJA5P36382 358 aa19.31■□□□□ 0.68
TPM1-219ENST00000559397 ATP2B2Q01814 1243 aa19.31■□□□□ 0.68
TPM1-219ENST00000559397 SGMS1Q86VZ5 419 aa19.31■□□□□ 0.68
TPM1-219ENST00000559397 ZNF280CQ8ND82 737 aa19.31■□□□□ 0.68
TPM1-219ENST00000559397 AS3MTQ9HBK9 375 aa19.31■□□□□ 0.68
TPM1-219ENST00000559397 ARHGEF10LQ9HCE6 1279 aa19.31■□□□□ 0.68
TPM1-219ENST00000559397 TMX2Q9Y320 296 aa19.31■□□□□ 0.68
TPM1-219ENST00000559397 GBP4Q96PP9 640 aa19.3■□□□□ 0.68
TPM1-219ENST00000559397 GJB2P29033 226 aa19.3■□□□□ 0.68
TPM1-219ENST00000559397 PDIA3P30101 505 aaKnown RBP19.3■□□□□ 0.68
TPM1-219ENST00000559397 SPP2Q13103 211 aa19.3■□□□□ 0.68
TPM1-219ENST00000559397 PPIL2Q13356 520 aa19.3■□□□□ 0.68
TPM1-219ENST00000559397 LRRC47Q8N1G4 583 aaKnown RBP19.3■□□□□ 0.68
TPM1-219ENST00000559397 TMTC2Q8N394 836 aa19.3■□□□□ 0.68
TPM1-219ENST00000559397 OTUD5Q96G74 571 aa19.3■□□□□ 0.68
TPM1-219ENST00000559397 HHIPL1Q96JK4 782 aa19.3■□□□□ 0.68
TPM1-219ENST00000559397 CREBZFQ9NS37 354 aa19.3■□□□□ 0.68
TPM1-219ENST00000559397 ABT1Q9ULW3 272 aaKnown RBP19.3■□□□□ 0.68
TPM1-219ENST00000559397 SYNPO2Q9UMS6 1093 aa19.3■□□□□ 0.68
TPM1-219ENST00000559397 PTPRFP10586 1907 aa19.29■□□□□ 0.68
TPM1-219ENST00000559397 IRF6O14896 467 aa19.29■□□□□ 0.68
TPM1-219ENST00000559397 SCRN1Q12765 414 aa19.29■□□□□ 0.68
TPM1-219ENST00000559397 STK3Q13188 491 aa19.29■□□□□ 0.68
TPM1-219ENST00000559397 RGMBQ6NW40 437 aa19.29■□□□□ 0.68
TPM1-219ENST00000559397 WNK4Q96J92 1243 aa19.29■□□□□ 0.68
TPM1-219ENST00000559397 LLPHQ9BRT6 129 aaKnown RBP19.29■□□□□ 0.68
TPM1-219ENST00000559397 BRPF3Q9ULD4 1205 aa19.29■□□□□ 0.68
TPM1-219ENST00000559397 TRIM75PA6NK02 468 aa19.28■□□□□ 0.68
TPM1-219ENST00000559397 USP17L10C9JJH3 530 aa19.28■□□□□ 0.68
TPM1-219ENST00000559397 BACE1P56817 501 aa19.28■□□□□ 0.68
TPM1-219ENST00000559397 RASAL3Q86YV0 1011 aa19.28■□□□□ 0.68
TPM1-219ENST00000559397 KIAA1683Q9H0B3 1180 aa19.28■□□□□ 0.68
TPM1-219ENST00000559397 KAT14Q9H8E8 782 aa19.28■□□□□ 0.68
TPM1-219ENST00000559397 KCNH4Q9UQ05 1017 aa19.28■□□□□ 0.68
TPM1-219ENST00000559397 WDR33Q9C0J8 1336 aaKnown RBP19.28■□□□□ 0.68
TPM1-219ENST00000559397 BAG4O95429 457 aaKnown RBP19.27■□□□□ 0.68
TPM1-219ENST00000559397 PDIA4P13667 645 aaKnown RBP19.27■□□□□ 0.68
TPM1-219ENST00000559397 SYT1P21579 422 aa19.27■□□□□ 0.68
TPM1-219ENST00000559397 ZNF157P51786 506 aaPredicted RBP19.27■□□□□ 0.68
TPM1-219ENST00000559397 MTMR2Q13614 643 aa19.27■□□□□ 0.68
TPM1-219ENST00000559397 KIAA1755Q5JYT7 1200 aa19.27■□□□□ 0.68
TPM1-219ENST00000559397 SPRYD7Q5W111 196 aa19.27■□□□□ 0.68
TPM1-219ENST00000559397 PNMA1Q8ND90 353 aa19.27■□□□□ 0.68
TPM1-219ENST00000559397 GMCL1P1Q8NEA9 526 aa19.27■□□□□ 0.68
TPM1-219ENST00000559397 CHMP4CQ96CF2 233 aa19.27■□□□□ 0.68
TPM1-219ENST00000559397 SH2D4AQ9H788 454 aa19.27■□□□□ 0.68
TPM1-219ENST00000559397 CCDC69A6NI79 296 aa19.27■□□□□ 0.67
TPM1-219ENST00000559397 CXCL11O14625 94 aa19.27■□□□□ 0.67
TPM1-219ENST00000559397 TROAPQ12815 778 aa19.27■□□□□ 0.67
TPM1-219ENST00000559397 SH3D19Q5HYK7 790 aa19.27■□□□□ 0.67
TPM1-219ENST00000559397 NFXL1Q6ZNB6 911 aa19.27■□□□□ 0.67
TPM1-219ENST00000559397 SMARCC2Q8TAQ2 1214 aa19.27■□□□□ 0.67
TPM1-219ENST00000559397 VCPKMTQ9H867 229 aa19.27■□□□□ 0.67
TPM1-219ENST00000559397 EMILIN3Q9NT22 766 aa19.27■□□□□ 0.67
TPM1-219ENST00000559397 KLF18A0A0U1RQI7 1052 aa19.26■□□□□ 0.67
TPM1-219ENST00000559397 C19orf81C9J6K1 198 aa19.26■□□□□ 0.67
TPM1-219ENST00000559397 F5H6K3 240 aa19.26■□□□□ 0.67
TPM1-219ENST00000559397 STX6O43752 255 aa19.26■□□□□ 0.67
TPM1-219ENST00000559397 ZBTB48P10074 688 aaPredicted RBP19.26■□□□□ 0.67
TPM1-219ENST00000559397 KLRC3Q07444 240 aa19.26■□□□□ 0.67
TPM1-219ENST00000559397 DGKZQ13574 1117 aa19.26■□□□□ 0.67
TPM1-219ENST00000559397 ZNF654Q8IZM8 581 aa19.26■□□□□ 0.67
TPM1-219ENST00000559397 FEZ1Q99689 392 aa19.26■□□□□ 0.67
TPM1-219ENST00000559397 HPS5Q9UPZ3 1129 aa19.26■□□□□ 0.67
TPM1-219ENST00000559397 SLC12A7Q9Y666 1083 aa19.26■□□□□ 0.67
TPM1-219ENST00000559397 A0A0G2JLL6 359 aaPredicted RBP19.25■□□□□ 0.67
TPM1-219ENST00000559397 DDX11L8A8MPP1 907 aa19.25■□□□□ 0.67
TPM1-219ENST00000559397 FAM155AB1AL88 458 aaPredicted RBP19.25■□□□□ 0.67
TPM1-219ENST00000559397 NDUFB10O96000 172 aa19.25■□□□□ 0.67
TPM1-219ENST00000559397 SLC10A3P09131 477 aa19.25■□□□□ 0.67
TPM1-219ENST00000559397 USP14P54578 494 aa19.25■□□□□ 0.67
TPM1-219ENST00000559397 ZYXQ15942 572 aaKnown RBP19.25■□□□□ 0.67
TPM1-219ENST00000559397 APOA5Q6Q788 366 aa19.25■□□□□ 0.67
TPM1-219ENST00000559397 PRRT2Q7Z6L0 340 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms