RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 FERD3LQ96RJ6 166 aa8.32□□□□□ -1.08
GPHN-215ENST00000557654 RC3H2Q9HBD1 1191 aaKnown RBP8.32□□□□□ -1.08
GPHN-215ENST00000557654 SHISA3A0PJX4 238 aa8.31□□□□□ -1.08
GPHN-215ENST00000557654 MEIS3P2A8K0S8 358 aa8.31□□□□□ -1.08
GPHN-215ENST00000557654 SLC9A7Q96T83 725 aa8.31□□□□□ -1.08
GPHN-215ENST00000557654 EFR3BQ9Y2G0 817 aa8.31□□□□□ -1.08
GPHN-215ENST00000557654 ACRP10323 421 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 TPP2P29144 1249 aaPredicted RBP8.3□□□□□ -1.08
GPHN-215ENST00000557654 CHMP4BP1P59074 171 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 RUFY4Q6ZNE9 571 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 THAP5Q7Z6K1 395 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 TMEM192Q8IY95 271 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 GPRASP2Q96D09 838 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 ASPNQ9BXN1 380 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 KCNH3Q9ULD8 1083 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 TNFRSF10CO14798 259 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 ESR1P03372 595 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 SRFP11831 508 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 SNW1Q13573 536 aaKnown RBP8.29□□□□□ -1.08
GPHN-215ENST00000557654 LRRFIP1Q32MZ4 808 aaKnown RBP8.29□□□□□ -1.08
GPHN-215ENST00000557654 SLC23A3Q6PIS1 610 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 CREG2Q8IUH2 290 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 TGIF2Q9GZN2 237 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 GJA8P48165 433 aa8.28□□□□□ -1.08
GPHN-215ENST00000557654 NBPF12Q5TAG4 269 aaPredicted RBP8.28□□□□□ -1.08
GPHN-215ENST00000557654 SLC6A18Q96N87 628 aa8.28□□□□□ -1.08
GPHN-215ENST00000557654 GPR62Q9BZJ7 368 aa8.28□□□□□ -1.08
GPHN-215ENST00000557654 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.28□□□□□ -1.08
GPHN-215ENST00000557654 CLEC3AO75596 197 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 TCF3P15923 654 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 ZYXQ15942 572 aaKnown RBP8.27□□□□□ -1.09
GPHN-215ENST00000557654 GAB4Q2WGN9 574 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 LSRQ86X29 649 aaPredicted RBP8.27□□□□□ -1.09
GPHN-215ENST00000557654 RASGRP4Q8TDF6 673 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 CCSER2Q9H7U1 834 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 GPATCH2Q9NW75 528 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 LMCD1Q9NZU5 365 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 PAPLNO95428 1278 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 IMPDH2P12268 514 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 ERCC5P28715 1186 aaPredicted RBP8.26□□□□□ -1.09
GPHN-215ENST00000557654 SOX9P48436 509 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 NASPP49321 788 aaPredicted RBP8.26□□□□□ -1.09
GPHN-215ENST00000557654 TMC3Q7Z5M5 1100 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 TSPYL5Q86VY4 417 aaPredicted RBP8.26□□□□□ -1.09
GPHN-215ENST00000557654 TRIT1Q9H3H1 467 aaKnown RBP8.26□□□□□ -1.09
GPHN-215ENST00000557654 DUSP13Q9UII6 198 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 MINPP1Q9UNW1 487 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 INPP5FQ9Y2H2 1132 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 ITGB5P18084 799 aa8.25□□□□□ -1.09
GPHN-215ENST00000557654 RNF4P78317 190 aa8.25□□□□□ -1.09
GPHN-215ENST00000557654 NBPF9Q3BBW0 867 aa8.25□□□□□ -1.09
GPHN-215ENST00000557654 TDRD10Q5VZ19 366 aaKnown RBP8.25□□□□□ -1.09
GPHN-215ENST00000557654 C19orf73Q9NVV2 129 aa8.25□□□□□ -1.09
GPHN-215ENST00000557654 SLAMF8Q9P0V8 285 aa8.25□□□□□ -1.09
GPHN-215ENST00000557654 DNAJC25-GNG10A0A024R161 153 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 C9IYK1 514 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 NMIQ13287 307 aaPredicted RBP8.24□□□□□ -1.09
GPHN-215ENST00000557654 RALGPS1Q5JS13 557 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 TMPRSS7Q7RTY8 843 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 MKRN2Q9H000 416 aaKnown RBP8.24□□□□□ -1.09
GPHN-215ENST00000557654 FAM86C1Q9NVL1 165 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 PCDHA11Q9Y5I1 949 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 LTKP29376 864 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 CCNFP41002 786 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 EGR3Q06889 387 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 COL9A2Q14055 689 aaPredicted RBP8.23□□□□□ -1.09
GPHN-215ENST00000557654 CLEC16AQ2KHT3 1053 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 UNC5AQ6ZN44 842 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 PPFIBP1Q86W92 1011 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 RBBP8NLQ8NC74 664 aaPredicted RBP8.23□□□□□ -1.09
GPHN-215ENST00000557654 ALPK1Q96QP1 1244 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 TM9SF2Q99805 663 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 SRRTQ9BXP5 876 aaKnown RBP8.23□□□□□ -1.09
GPHN-215ENST00000557654 PRDM14Q9GZV8 571 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 CTNND2Q9UQB3 1225 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 GUCY2CP25092 1073 aa8.22□□□□□ -1.09
GPHN-215ENST00000557654 INTS3Q68E01 1043 aaKnown RBP8.22□□□□□ -1.09
GPHN-215ENST00000557654 CRBNQ96SW2 442 aa8.22□□□□□ -1.09
GPHN-215ENST00000557654 HDAC8Q9BY41 377 aa8.22□□□□□ -1.09
GPHN-215ENST00000557654 ADAMTS10Q9H324 1103 aa8.22□□□□□ -1.09
GPHN-215ENST00000557654 SUCOQ9UBS9 1254 aaKnown RBP8.22□□□□□ -1.09
GPHN-215ENST00000557654 MEIS1O00470 390 aa8.21□□□□□ -1.1
GPHN-215ENST00000557654 PRAMEF1O95521 474 aa8.21□□□□□ -1.1
GPHN-215ENST00000557654 EIF6P56537 245 aaKnown RBP8.21□□□□□ -1.1
GPHN-215ENST00000557654 FYB2Q5VWT5 728 aa8.21□□□□□ -1.1
GPHN-215ENST00000557654 ATG4DQ86TL0 474 aaPredicted RBP8.21□□□□□ -1.1
GPHN-215ENST00000557654 SPATA32Q96LK8 384 aa8.21□□□□□ -1.1
GPHN-215ENST00000557654 ASCC2Q9H1I8 757 aaPredicted RBP8.21□□□□□ -1.1
GPHN-215ENST00000557654 CAPN10Q9HC96 672 aa8.21□□□□□ -1.1
GPHN-215ENST00000557654 CARMIL2Q6F5E8 1435 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 GIPRP48546 466 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 HK2P52789 917 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 ERVFC1P60507 584 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 TTC6Q86TZ1 520 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 TAB3Q8N5C8 712 aaPredicted RBP8.2□□□□□ -1.1
GPHN-215ENST00000557654 FLAD1Q8NFF5 587 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 SHDQ96IW2 340 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 GFOD1Q9NXC2 390 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 FBXL21Q9UKT6 434 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms