RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 MYH13Q9UKX3 1938 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 PDS5AQ29RF7 1337 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 PNMA6EA0A0J9YXQ4 647 aa12.08□□□□□ -0.48
HNRNPC-228ENST00000557033 LGR5O75473 907 aa12.08□□□□□ -0.48
HNRNPC-228ENST00000557033 ADORA1P30542 326 aa12.08□□□□□ -0.48
HNRNPC-228ENST00000557033 ATP8B2P98198 1209 aa12.08□□□□□ -0.48
HNRNPC-228ENST00000557033 FTSJ3Q8IY81 847 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-228ENST00000557033 RGL4Q8IZJ4 473 aa12.08□□□□□ -0.48
HNRNPC-228ENST00000557033 XAGE2Q96GT9 111 aa12.08□□□□□ -0.48
HNRNPC-228ENST00000557033 WNK4Q96J92 1243 aa12.08□□□□□ -0.48
HNRNPC-228ENST00000557033 TMEM39BQ9GZU3 492 aa12.08□□□□□ -0.48
HNRNPC-228ENST00000557033 BCL11AQ9H165 835 aa12.08□□□□□ -0.48
HNRNPC-228ENST00000557033 DGKZQ13574 1117 aa12.07□□□□□ -0.48
HNRNPC-228ENST00000557033 SPTY2D1Q68D10 685 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-228ENST00000557033 CAPN12Q6ZSI9 719 aa12.07□□□□□ -0.48
HNRNPC-228ENST00000557033 SSH3Q8TE77 659 aa12.07□□□□□ -0.48
HNRNPC-228ENST00000557033 FAM151AQ8WW52 585 aa12.07□□□□□ -0.48
HNRNPC-228ENST00000557033 FAM163AQ96GL9 167 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-228ENST00000557033 CLMNQ96JQ2 1002 aa12.07□□□□□ -0.48
HNRNPC-228ENST00000557033 NEUROD6Q96NK8 337 aa12.07□□□□□ -0.48
HNRNPC-228ENST00000557033 BACH2Q9BYV9 841 aa12.07□□□□□ -0.48
HNRNPC-228ENST00000557033 MCOLN1Q9GZU1 580 aa12.07□□□□□ -0.48
HNRNPC-228ENST00000557033 PCDHB3Q9Y5E6 796 aa12.07□□□□□ -0.48
HNRNPC-228ENST00000557033 TBC1D8O95759 1140 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 PRDX5P30044 214 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 CACNB3P54284 484 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 PPP4CP60510 307 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 MTMR3Q13615 1198 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 RASGRF1Q13972 1273 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 RNF20Q5VTR2 975 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 OTUD7BQ6GQQ9 843 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 UBXN4Q92575 508 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 MKNK1Q9BUB5 465 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 GPR108Q9NPR9 543 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 DAGLAQ9Y4D2 1042 aa12.06□□□□□ -0.48
HNRNPC-228ENST00000557033 USP4Q13107 963 aa12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 PKN2Q16513 984 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 VARS2Q5ST30 1063 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 GORABQ5T7V8 394 aa12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 DCAF15Q66K64 600 aa12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 CDC42EP5Q6NZY7 148 aa12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 ITPRIPQ8IWB1 547 aa12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 CDAN1Q8IWY9 1227 aa12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 USP40Q9NVE5 1235 aa12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 ABCF2Q9UG63 623 aa12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 CSADQ9Y600 493 aa12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 RPAP1Q9BWH6 1393 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-228ENST00000557033 CCDC85CA6NKD9 419 aa12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 M0R2N6 131 aa12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 GPR25O00155 361 aa12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 SURF6O75683 361 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 RLBP1P12271 317 aa12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 MRPL58Q14197 206 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 CTU1Q7Z7A3 348 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 DZIP1Q86YF9 867 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 ZNF296Q8WUU4 475 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 OPTNQ96CV9 577 aa12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 ELP3Q9H9T3 547 aa12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 NOP58Q9Y2X3 529 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 LAMB1P07942 1786 aa12.04□□□□□ -0.48
HNRNPC-228ENST00000557033 VGLL4Q14135 290 aa12.03□□□□□ -0.48
HNRNPC-228ENST00000557033 SF3A1Q15459 793 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-228ENST00000557033 SH3RF1Q7Z6J0 888 aa12.03□□□□□ -0.48
HNRNPC-228ENST00000557033 SPATA5Q8NB90 893 aa12.03□□□□□ -0.48
HNRNPC-228ENST00000557033 COL26A1Q96A83 441 aa12.03□□□□□ -0.48
HNRNPC-228ENST00000557033 IDI2Q9BXS1 227 aa12.03□□□□□ -0.48
HNRNPC-228ENST00000557033 ZNF341Q9BYN7 854 aa12.03□□□□□ -0.48
HNRNPC-228ENST00000557033 HMG20BQ9P0W2 317 aa12.03□□□□□ -0.48
HNRNPC-228ENST00000557033 GAKO14976 1311 aa12.03□□□□□ -0.48
HNRNPC-228ENST00000557033 TK2O00142 265 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 IGF2BP3O00425 579 aaKnown RBP eCLIP12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 FKTNO75072 461 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 ENTPD3O75355 529 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 MAP4K4O95819 1239 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 LDHCP07864 332 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 NPR3P17342 541 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 ERCC5P28715 1186 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 GTF2A2P52657 109 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 GSTO1P78417 241 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 OS9Q13438 667 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 TNNI3KQ59H18 835 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 CCDC158Q5M9N0 1113 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 PTCRAQ6ISU1 281 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 ERO1BQ86YB8 467 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 PURBQ96QR8 312 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 SPSB2Q99619 263 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 UNC93B1Q9H1C4 597 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 ZNF112Q9UJU3 913 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 FPGT-TNNI3KV9GXZ4 949 aa12.02□□□□□ -0.49
HNRNPC-228ENST00000557033 MYH2Q9UKX2 1941 aa12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 GPR75-ASB3A0A0A6YYF3 556 aa12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 RGS19P49795 217 aa12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 MECOMQ03112 1051 aa12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 TCP10Q12799 353 aa12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 NFIAQ12857 509 aa12.01□□□□□ -0.49
HNRNPC-228ENST00000557033 MIGA2Q7L4E1 593 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms