RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MRPL44Q9H9J2 332 aaKnown RBP19.43■□□□□ 0.7
PTPN21-208ENST00000556564 MINPP1Q9UNW1 487 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 SNAP23O00161 211 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 IFFO1Q0D2I5 559 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 INF2Q27J81 1249 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 ERCC3P19447 782 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 USP14P54578 494 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 COMMD10Q9Y6G5 202 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 TECP42680 631 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 HERC4Q5GLZ8 1057 aaPredicted RBP19.43■□□□□ 0.7
PTPN21-208ENST00000556564 BLZF1Q9H2G9 400 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 TTC12Q9H892 705 aaPredicted RBP19.43■□□□□ 0.7
PTPN21-208ENST00000556564 IGKV5-2P06315 115 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 EPHA10Q5JZY3 1008 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 NELFCDQ8IXH7 590 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 CCDC17Q96LX7 622 aa19.43■□□□□ 0.7
PTPN21-208ENST00000556564 MYCP01106 439 aaPredicted RBP19.42■□□□□ 0.7
PTPN21-208ENST00000556564 STAMQ92783 540 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 ZNF274Q96GC6 653 aaPredicted RBP19.42■□□□□ 0.7
PTPN21-208ENST00000556564 NOC4LQ9BVI4 516 aaKnown RBP19.42■□□□□ 0.7
PTPN21-208ENST00000556564 TERF1P54274 439 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 GNG11P61952 73 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 KCTD2Q14681 263 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 NFIXQ14938 502 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 OTUD6AQ7L8S5 288 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 BCCIPQ9P287 314 aaKnown RBP eCLIP19.42■□□□□ 0.7
PTPN21-208ENST00000556564 ACTN2P35609 894 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 GPSM2P81274 684 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 MYO3AQ8NEV4 1616 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 SASH1O94885 1247 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 SCG2P13521 617 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 TSPYL1Q9H0U9 437 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 IFNKQ9P0W0 207 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 SERPINB13Q9UIV8 391 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 FER1L4A9Z1Z3 1794 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 KIF4AO95239 1232 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 CRKP46108 304 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 CRACR2AQ9BSW2 395 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 TPCN1Q9ULQ1 816 aa19.42■□□□□ 0.7
PTPN21-208ENST00000556564 SMC1AQ14683 1233 aaKnown RBP19.41■□□□□ 0.7
PTPN21-208ENST00000556564 DDX25Q9UHL0 483 aaKnown RBP19.41■□□□□ 0.7
PTPN21-208ENST00000556564 PCDHA1Q9Y5I3 950 aa19.41■□□□□ 0.7
PTPN21-208ENST00000556564 IGBP1P78318 339 aa19.41■□□□□ 0.7
PTPN21-208ENST00000556564 CCDC50Q8IVM0 306 aa19.41■□□□□ 0.7
PTPN21-208ENST00000556564 SH3RF3Q8TEJ3 882 aaPredicted RBP19.41■□□□□ 0.7
PTPN21-208ENST00000556564 SSH2Q76I76 1423 aa19.41■□□□□ 0.7
PTPN21-208ENST00000556564 SLC10A4Q96EP9 437 aa19.41■□□□□ 0.7
PTPN21-208ENST00000556564 ZSWIM4Q9H7M6 989 aa19.41■□□□□ 0.7
PTPN21-208ENST00000556564 PI4KBQ9UBF8 816 aa19.41■□□□□ 0.7
PTPN21-208ENST00000556564 KRT19P08727 400 aa19.4■□□□□ 0.7
PTPN21-208ENST00000556564 RNF169Q8NCN4 708 aa19.4■□□□□ 0.7
PTPN21-208ENST00000556564 A0A0G2JLW4 131 aa19.4■□□□□ 0.7
PTPN21-208ENST00000556564 LEKR1Q6ZMV7 388 aa19.4■□□□□ 0.7
PTPN21-208ENST00000556564 LINC00116Q8NCU8 138 aa19.4■□□□□ 0.7
PTPN21-208ENST00000556564 NAA15Q9BXJ9 866 aaKnown RBP19.4■□□□□ 0.7
PTPN21-208ENST00000556564 TM6SF1Q9BZW5 370 aa19.4■□□□□ 0.7
PTPN21-208ENST00000556564 LSG1Q9H089 658 aaKnown RBP19.4■□□□□ 0.7
PTPN21-208ENST00000556564 RTEL1Q9NZ71 1219 aa19.4■□□□□ 0.7
PTPN21-208ENST00000556564 H0YHG0 523 aa19.4■□□□□ 0.7
PTPN21-208ENST00000556564 PLA2G4DQ86XP0 818 aa19.4■□□□□ 0.7
PTPN21-208ENST00000556564 MARCH10Q8NA82 808 aaPredicted RBP19.4■□□□□ 0.7
PTPN21-208ENST00000556564 CCNA1P78396 465 aa19.39■□□□□ 0.7
PTPN21-208ENST00000556564 MSANTD4Q8NCY6 345 aa19.39■□□□□ 0.7
PTPN21-208ENST00000556564 DHX36Q9H2U1 1008 aaKnown RBP19.39■□□□□ 0.7
PTPN21-208ENST00000556564 STAP2Q9UGK3 403 aa19.39■□□□□ 0.7
PTPN21-208ENST00000556564 ADAMTS13Q76LX8 1427 aa19.39■□□□□ 0.7
PTPN21-208ENST00000556564 GOLGA6L9A6NEM1 432 aa19.39■□□□□ 0.69
PTPN21-208ENST00000556564 MCAMP43121 646 aa19.39■□□□□ 0.69
PTPN21-208ENST00000556564 OSBP2Q969R2 916 aa19.39■□□□□ 0.69
PTPN21-208ENST00000556564 VPS16Q9H269 839 aa19.39■□□□□ 0.69
PTPN21-208ENST00000556564 SPATA31A5Q5VU36 1347 aa19.39■□□□□ 0.69
PTPN21-208ENST00000556564 SPATA31A7Q8IWB4 1347 aa19.39■□□□□ 0.69
PTPN21-208ENST00000556564 SEPT14Q6ZU15 432 aa19.39■□□□□ 0.69
PTPN21-208ENST00000556564 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
PTPN21-208ENST00000556564 EHBP1Q8NDI1 1231 aa19.39■□□□□ 0.69
PTPN21-208ENST00000556564 ZSWIM6Q9HCJ5 1215 aa19.39■□□□□ 0.69
PTPN21-208ENST00000556564 KRT9P35527 623 aa19.39■□□□□ 0.69
PTPN21-208ENST00000556564 LEO1Q8WVC0 666 aaPredicted RBP19.39■□□□□ 0.69
PTPN21-208ENST00000556564 DYDC1Q8WWB3 177 aa19.39■□□□□ 0.69
PTPN21-208ENST00000556564 PCP11498 1178 aaKnown RBP19.38■□□□□ 0.69
PTPN21-208ENST00000556564 SNAP25P60880 206 aa19.38■□□□□ 0.69
PTPN21-208ENST00000556564 CCDC186Q7Z3E2 898 aa19.38■□□□□ 0.69
PTPN21-208ENST00000556564 SPON1Q9HCB6 807 aa19.38■□□□□ 0.69
PTPN21-208ENST00000556564 CCDC42Q96M95 316 aa19.38■□□□□ 0.69
PTPN21-208ENST00000556564 DLC1Q96QB1 1528 aa19.38■□□□□ 0.69
PTPN21-208ENST00000556564 TEKT3Q9BXF9 490 aa19.38■□□□□ 0.69
PTPN21-208ENST00000556564 GBP3Q9H0R5 595 aa19.38■□□□□ 0.69
PTPN21-208ENST00000556564 TDRD3Q9H7E2 651 aaKnown RBP19.38■□□□□ 0.69
PTPN21-208ENST00000556564 PTPRUQ92729 1446 aa19.38■□□□□ 0.69
PTPN21-208ENST00000556564 DEPTORQ8TB45 409 aa19.38■□□□□ 0.69
PTPN21-208ENST00000556564 LRRC7Q96NW7 1537 aa19.38■□□□□ 0.69
PTPN21-208ENST00000556564 KANSL2Q9H9L4 492 aa19.38■□□□□ 0.69
PTPN21-208ENST00000556564 CPDO75976 1380 aa19.37■□□□□ 0.69
PTPN21-208ENST00000556564 PFKFB2O60825 505 aa19.37■□□□□ 0.69
PTPN21-208ENST00000556564 ASPRV1Q53RT3 343 aa19.37■□□□□ 0.69
PTPN21-208ENST00000556564 ZNF521Q96K83 1311 aa19.37■□□□□ 0.69
PTPN21-208ENST00000556564 ZNF202O95125 648 aa19.37■□□□□ 0.69
PTPN21-208ENST00000556564 MAP9Q49MG5 647 aa19.37■□□□□ 0.69
PTPN21-208ENST00000556564 XKR9Q5GH70 373 aa19.37■□□□□ 0.69
PTPN21-208ENST00000556564 CSGALNACT2Q8N6G5 542 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms