RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 THEGQ9P2T0 379 aa5.42□□□□□ -1.54
TMEM106C-220ENST00000552561 RBPJLQ9UBG7 517 aa5.42□□□□□ -1.54
TMEM106C-220ENST00000552561 ZBTB21Q9ULJ3 1066 aa5.42□□□□□ -1.54
TMEM106C-220ENST00000552561 ZMYND8Q9ULU4 1186 aaPredicted RBP5.42□□□□□ -1.54
TMEM106C-220ENST00000552561 TNNQ9UQP3 1299 aa5.42□□□□□ -1.54
TMEM106C-220ENST00000552561 RABGAP1Q9Y3P9 1069 aa5.42□□□□□ -1.54
TMEM106C-220ENST00000552561 GTF3C3Q9Y5Q9 886 aa5.42□□□□□ -1.54
TMEM106C-220ENST00000552561 CACNA1BQ00975 2339 aa5.42□□□□□ -1.54
TMEM106C-220ENST00000552561 RLFQ13129 1914 aa5.42□□□□□ -1.54
TMEM106C-220ENST00000552561 EYSQ5T1H1 3165 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 MYH1P12882 1939 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 RLBP1P12271 317 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 ELNP15502 786 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 MAGEA10P43363 369 aaPredicted RBP5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 ZAP70P43403 619 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 HSP90AB4PQ58FF6 505 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 ARSIQ5FYB1 569 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 GADL1Q6ZQY3 521 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 TTC6Q86TZ1 520 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 CCDC84Q86UT8 332 aaPredicted RBP5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 RPAP2Q8IXW5 612 aaPredicted RBP5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 GPRC5AQ8NFJ5 357 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 ADAMTS19Q8TE59 1207 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 ATXN2LQ8WWM7 1075 aaKnown RBP5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 TRIB2Q92519 343 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 NEUROD6Q96NK8 337 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 NBPF3Q9H094 633 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 TXNRD2Q9NNW7 524 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 HMX1Q9NP08 348 aaPredicted RBP5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 PIH1D3Q9NQM4 214 aaKnown RBP5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 EMILIN3Q9NT22 766 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 AATFQ9NY61 560 aaKnown RBP eCLIP5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 RAI14Q9P0K7 980 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 SERPINB13Q9UIV8 391 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 ROBO3Q96MS0 1386 aa5.41□□□□□ -1.54
TMEM106C-220ENST00000552561 TCRBV5S4A2TA0A5A2 114 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 FAM196BA6NMK8 535 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 USP17L15C9J2P7 530 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 USP17L13C9JLJ4 530 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 USP17L11C9JVI0 530 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 USP17L18D6R9N7 530 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 USP17L22D6RA61 530 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 USP17L17D6RBQ6 530 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 USP17L19D6RCP7 530 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 USP17L20D6RJB6 530 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 MSCO60682 206 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 SURF6O75683 361 aaKnown RBP5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 CNMDO75829 334 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 HLA-DOAP06340 250 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 GUCY1A2P33402 732 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 SHMT1P34896 483 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 USP14P54578 494 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 ERVK-9P63128 1117 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 ERVK-24P63145 666 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 USP17L24Q0WX57 530 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 MTMR2Q13614 643 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 GRB14Q14449 540 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 TTF1Q15361 905 aaPredicted RBP5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 Q3C1V9 767 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 TMEM31Q5JXX7 168 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 TTC39AQ5SRH9 613 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 GORABQ5T7V8 394 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 C1orf53Q5VUE5 145 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 USP17L2Q6R6M4 530 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 CATSPERGQ6ZRH7 1159 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 ABRAQ8N0Z2 381 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 SHCBP1Q8NEM2 672 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 FBXO22Q8NEZ5 403 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 TGFBRAP1Q8WUH2 860 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 DEFB118Q96PH6 123 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 CDX2Q99626 313 aaPredicted RBP5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 APBA2Q99767 749 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 NUDT12Q9BQG2 462 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 NOL10Q9BSC4 688 aaKnown RBP5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 TLR7Q9NYK1 1049 aaKnown RBP5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 PRKAG2Q9UGJ0 569 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 ADAMTS5Q9UNA0 930 aa5.4□□□□□ -1.54
TMEM106C-220ENST00000552561 PFASO15067 1338 aa5.4□□□□□ -1.55
TMEM106C-220ENST00000552561 GREB1LQ9C091 1923 aaPredicted RBP5.4□□□□□ -1.55
TMEM106C-220ENST00000552561 PARP14Q460N5 1801 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 FRMPD3Q5JV73 1810 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 SLC15A5A6NIM6 579 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 STRNO43815 780 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 MS4A1P11836 297 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 VCAM1P19320 739 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 RGS2P41220 211 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 MRE11P49959 708 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 CCNA1P78396 465 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 IRX3P78415 501 aaPredicted RBP5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 MAP2K5Q13163 448 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 SNX17Q15036 470 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 AAK1Q2M2I8 961 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 GPR142Q7Z601 462 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 MAPKAPK5Q8IW41 473 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 SIRT2Q8IXJ6 389 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 RHPN1Q8TCX5 695 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 MYLIPQ8WY64 445 aa5.39□□□□□ -1.55
TMEM106C-220ENST00000552561 LPAR1Q92633 364 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms