RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 C14orf80Q86SX3 495 aa7.89□□□□□ -1.15
VPS29-210ENST00000552130 WFDC3Q8IUB2 231 aa7.89□□□□□ -1.15
VPS29-210ENST00000552130 KIAA0825Q8IV33 1275 aa7.89□□□□□ -1.15
VPS29-210ENST00000552130 MYO1HQ8N1T3 1032 aa7.89□□□□□ -1.15
VPS29-210ENST00000552130 AGBL5Q8NDL9 886 aa7.89□□□□□ -1.15
VPS29-210ENST00000552130 PRKAG3Q9UGI9 489 aa7.89□□□□□ -1.15
VPS29-210ENST00000552130 CCDC163A0A0D9SF12 145 aa7.88□□□□□ -1.15
VPS29-210ENST00000552130 TIMM44O43615 452 aa7.88□□□□□ -1.15
VPS29-210ENST00000552130 PAPLNO95428 1278 aa7.88□□□□□ -1.15
VPS29-210ENST00000552130 ST13P50502 369 aaKnown RBP7.88□□□□□ -1.15
VPS29-210ENST00000552130 TCEA2Q15560 299 aa7.88□□□□□ -1.15
VPS29-210ENST00000552130 C8orf34Q49A92 452 aa7.88□□□□□ -1.15
VPS29-210ENST00000552130 INO80DQ53TQ3 878 aaPredicted RBP7.88□□□□□ -1.15
VPS29-210ENST00000552130 DALRD3Q5D0E6 543 aaKnown RBP7.88□□□□□ -1.15
VPS29-210ENST00000552130 PEAR1Q5VY43 1037 aaPredicted RBP7.88□□□□□ -1.15
VPS29-210ENST00000552130 DDX42Q86XP3 938 aaKnown RBP eCLIP7.88□□□□□ -1.15
VPS29-210ENST00000552130 TTC16Q8NEE8 873 aa7.88□□□□□ -1.15
VPS29-210ENST00000552130 PPCSQ9HAB8 311 aa7.88□□□□□ -1.15
VPS29-210ENST00000552130 ZC3H7BQ9UGR2 993 aaKnown RBP7.88□□□□□ -1.15
VPS29-210ENST00000552130 TNFRSF21O75509 655 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 LDHCP07864 332 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 FAM163BP0C2L3 166 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 ADH5P11766 374 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 EDN3P14138 238 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 TRAPPC10P48553 1259 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 MCL1Q07820 350 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 GRAMD1BQ3KR37 738 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 SEZ6L2Q6UXD5 910 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 IFNL3Q8IZI9 196 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 CHAC2Q8WUX2 184 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 E2F7Q96AV8 911 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 GINM1Q9NU53 330 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 KBTBD4Q9NVX7 518 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 POLIQ9UNA4 740 aa7.87□□□□□ -1.15
VPS29-210ENST00000552130 EIF4EBP3O60516 100 aaPredicted RBP7.86□□□□□ -1.15
VPS29-210ENST00000552130 C2orf27AQ580R0 203 aa7.86□□□□□ -1.15
VPS29-210ENST00000552130 SLC4A10Q6U841 1118 aa7.86□□□□□ -1.15
VPS29-210ENST00000552130 FLCNQ8NFG4 579 aa7.86□□□□□ -1.15
VPS29-210ENST00000552130 MYRIPQ8NFW9 859 aa7.86□□□□□ -1.15
VPS29-210ENST00000552130 TTC8Q8TAM2 541 aa7.86□□□□□ -1.15
VPS29-210ENST00000552130 ANAPC16Q96DE5 110 aa7.86□□□□□ -1.15
VPS29-210ENST00000552130 NEUROD6Q96NK8 337 aa7.86□□□□□ -1.15
VPS29-210ENST00000552130 YIPF2Q9BWQ6 316 aa7.86□□□□□ -1.15
VPS29-210ENST00000552130 GSX1Q9H4S2 264 aaPredicted RBP7.86□□□□□ -1.15
VPS29-210ENST00000552130 MCM8Q9UJA3 840 aa7.86□□□□□ -1.15
VPS29-210ENST00000552130 PLAAQ9Y263 795 aa7.86□□□□□ -1.15
VPS29-210ENST00000552130 MRPS23Q9Y3D9 190 aaKnown RBP7.86□□□□□ -1.15
VPS29-210ENST00000552130 ACTL7BQ9Y614 415 aa7.86□□□□□ -1.15
VPS29-210ENST00000552130 EIF1AYO14602 144 aaKnown RBP7.85□□□□□ -1.15
VPS29-210ENST00000552130 RASGRP1O95267 797 aa7.85□□□□□ -1.15
VPS29-210ENST00000552130 SOX9P48436 509 aa7.85□□□□□ -1.15
VPS29-210ENST00000552130 ORC1Q13415 861 aa7.85□□□□□ -1.15
VPS29-210ENST00000552130 KCTD2Q14681 263 aa7.85□□□□□ -1.15
VPS29-210ENST00000552130 AXDND1Q5T1B0 1012 aaPredicted RBP7.85□□□□□ -1.15
VPS29-210ENST00000552130 ACBD5Q5T8D3 534 aaPredicted RBP7.85□□□□□ -1.15
VPS29-210ENST00000552130 DRC7Q8IY82 874 aa7.85□□□□□ -1.15
VPS29-210ENST00000552130 CHPFQ8IZ52 775 aa7.85□□□□□ -1.15
VPS29-210ENST00000552130 TEX19Q8NA77 164 aa7.85□□□□□ -1.15
VPS29-210ENST00000552130 CPLX3Q8WVH0 158 aa7.85□□□□□ -1.15
VPS29-210ENST00000552130 ACSS3Q9H6R3 686 aa7.85□□□□□ -1.15
VPS29-210ENST00000552130 WASHC2CQ9Y4E1 1318 aa7.84□□□□□ -1.15
VPS29-210ENST00000552130 CTSBP07858 339 aa7.84□□□□□ -1.15
VPS29-210ENST00000552130 GSTM4Q03013 218 aa7.84□□□□□ -1.15
VPS29-210ENST00000552130 RASGRF1Q13972 1273 aa7.84□□□□□ -1.15
VPS29-210ENST00000552130 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS29-210ENST00000552130 SYNPOQ8N3V7 929 aa7.84□□□□□ -1.15
VPS29-210ENST00000552130 ASAP3Q8TDY4 903 aa7.84□□□□□ -1.15
VPS29-210ENST00000552130 SNX29Q8TEQ0 813 aa7.84□□□□□ -1.15
VPS29-210ENST00000552130 SEMA6CQ9H3T2 930 aa7.84□□□□□ -1.15
VPS29-210ENST00000552130 AS3MTQ9HBK9 375 aa7.84□□□□□ -1.15
VPS29-210ENST00000552130 ADAMTS1Q9UHI8 967 aa7.84□□□□□ -1.15
VPS29-210ENST00000552130 CD2APQ9Y5K6 639 aa7.84□□□□□ -1.15
VPS29-210ENST00000552130 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.84□□□□□ -1.15
VPS29-210ENST00000552130 TCERG1O14776 1098 aaKnown RBP7.83□□□□□ -1.16
VPS29-210ENST00000552130 GIPC1O14908 333 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 PDPK1O15530 556 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 PHACTR2O75167 634 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 ZRANB2O95218 330 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS29-210ENST00000552130 ASMTLO95671 621 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 NFICP08651 508 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 STAT3P40763 770 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 RAB27AP51159 221 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 CYP27A1Q02318 531 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 CNGB1Q14028 1251 aaPredicted RBP7.83□□□□□ -1.16
VPS29-210ENST00000552130 MORC3Q14149 939 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 MAP7Q14244 749 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 DUSP27Q5VZP5 1158 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 ZNF765Q7L2R6 523 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 THNSL2Q86YJ6 484 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 CELF2-AS1Q8N7Q2 184 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 ENOX1Q8TC92 643 aaKnown RBP7.83□□□□□ -1.16
VPS29-210ENST00000552130 THAP3Q8WTV1 239 aaPredicted RBP7.83□□□□□ -1.16
VPS29-210ENST00000552130 BCL7CQ8WUZ0 217 aaPredicted RBP7.83□□□□□ -1.16
VPS29-210ENST00000552130 OSBPL7Q9BZF2 842 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 PTPRHQ9HD43 1115 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 LATS2Q9NRM7 1088 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 C1GALT1Q9NS00 363 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 ZIM2Q9NZV7 527 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 TAGLN3Q9UI15 199 aa7.83□□□□□ -1.16
VPS29-210ENST00000552130 CARMIL2Q6F5E8 1435 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms