RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 EGFRP00533 1210 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 HLA-DOAP06340 250 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 FGRP09769 529 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 UBE2HP62256 183 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 NFIAQ12857 509 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 PICALMQ13492 652 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 ME3Q16798 604 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 AKNAD1Q5T1N1 836 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 USP50Q70EL3 339 aaPredicted RBP7.59□□□□□ -1.19
CASC18-202ENST00000548557 C11orf96Q7Z7L8 435 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 STAG1Q8WVM7 1258 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 FEZ2Q9UHY8 353 aaPredicted RBP7.59□□□□□ -1.19
CASC18-202ENST00000548557 MTMR6Q9Y217 621 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 ZKSCAN5Q9Y2L8 839 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 FAN1Q9Y2M0 1017 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 ATP6V1DQ9Y5K8 247 aa7.59□□□□□ -1.19
CASC18-202ENST00000548557 ROBO3Q96MS0 1386 aa7.59□□□□□ -1.2
CASC18-202ENST00000548557 PITPNM2Q9BZ72 1349 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 CLRN2A0PK11 232 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 E7EWF7 191 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 GYS2P54840 703 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 HAND2P61296 217 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 PDE4BQ07343 736 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 CCDC183Q5T5S1 534 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 MFSD6Q6ZSS7 791 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 PNMA8AQ86V59 439 aaPredicted RBP7.58□□□□□ -1.2
CASC18-202ENST00000548557 NCOA7Q8NI08 942 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 MKL1Q969V6 931 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 NEK1Q96PY6 1258 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 KRT23Q9C075 422 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 EHD4Q9H223 541 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 PI4KBQ9UBF8 816 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 LETM1O95202 739 aaPredicted RBP7.58□□□□□ -1.2
CASC18-202ENST00000548557 MCM5P33992 734 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 EPHX2P34913 555 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 PLCD1P51178 756 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 CACNB3P54284 484 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 MTA1Q13330 715 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 UVSSAQ2YD98 709 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 DPH6Q7L8W6 267 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 APOBEC3FQ8IUX4 373 aaKnown RBP7.58□□□□□ -1.2
CASC18-202ENST00000548557 FOXP4Q8IVH2 680 aaPredicted RBP7.58□□□□□ -1.2
CASC18-202ENST00000548557 FAM184AQ8NB25 1140 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 NBPF3Q9H094 633 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 VEZTQ9HBM0 779 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 CCDC39Q9UFE4 941 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 SERPINB13Q9UIV8 391 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 TPCN1Q9ULQ1 816 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 PPP2R3BQ9Y5P8 575 aa7.58□□□□□ -1.2
CASC18-202ENST00000548557 TCP10L2B9ZVM9 353 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 ORC4O43929 436 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 HIRAP54198 1017 aaPredicted RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 TCP10Q12799 353 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 BLOC1S2Q6QNY1 142 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 RALYLQ86SE5 291 aaKnown RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 ANKRD23Q86SG2 305 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 METTL16Q86W50 562 aaKnown RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 TBC1D10CQ8IV04 446 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 ZSCAN29Q8IWY8 852 aaPredicted RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 TRPM4Q8TD43 1214 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 ALDH8A1Q9H2A2 487 aaPredicted RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 PLSCR2Q9NRY7 297 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 SWAP70Q9UH65 585 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 SAP30BPQ9UHR5 308 aaKnown RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 ADAMTSL1Q8N6G6 1762 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 FOCADQ5VW36 1801 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 WDR19Q8NEZ3 1342 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 FIBPO43427 364 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 TPM2P07951 284 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 VEGFAP15692 232 aaPredicted RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 SSR1P43307 286 aaKnown RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 CTDSPL2Q05D32 466 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 GABPAQ06546 454 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 COL9A3Q14050 684 aaPredicted RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 PUS10Q3MIT2 529 aaKnown RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 STOX1Q6ZVD7 989 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 C16orf86Q6ZW13 317 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 DHX32Q7L7V1 743 aaKnown RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 NECAB1Q8N987 351 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 ESR2Q92731 530 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 HOOK2Q96ED9 719 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 TAF1DQ9H5J8 278 aaPredicted RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 PGAP2Q9UHJ9 254 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 HERC5Q9UII4 1024 aaKnown RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 TPX2Q9ULW0 747 aaKnown RBP7.57□□□□□ -1.2
CASC18-202ENST00000548557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.57□□□□□ -1.2
CASC18-202ENST00000548557 TAF6LQ9Y6J9 622 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 WDR90Q96KV7 1748 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 ECM29Q5VYK3 1845 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 CNTNAP1P78357 1384 aa7.57□□□□□ -1.2
CASC18-202ENST00000548557 CYP2D7A0A087X1C5 515 aa7.56□□□□□ -1.2
CASC18-202ENST00000548557 DDTLA6NHG4 134 aaPredicted RBP7.56□□□□□ -1.2
CASC18-202ENST00000548557 POTECB2RU33 542 aa7.56□□□□□ -1.2
CASC18-202ENST00000548557 CYP2D6P10635 497 aa7.56□□□□□ -1.2
CASC18-202ENST00000548557 MNX1P50219 401 aaPredicted RBP7.56□□□□□ -1.2
CASC18-202ENST00000548557 FXR2P51116 673 aaKnown RBP eCLIP7.56□□□□□ -1.2
CASC18-202ENST00000548557 TERF1P54274 439 aa7.56□□□□□ -1.2
CASC18-202ENST00000548557 DNM1Q05193 864 aaKnown RBP7.56□□□□□ -1.2
CASC18-202ENST00000548557 RASA3Q14644 834 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms