RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 MYH7P12883 1935 aa13.07□□□□□ -0.32
DDB1-224ENST00000545894 ZNF532Q9HCE3 1301 aa13.07□□□□□ -0.32
DDB1-224ENST00000545894 BRCA1P38398 1863 aaKnown RBP13.07□□□□□ -0.32
DDB1-224ENST00000545894 PTPREP23469 700 aa13.07□□□□□ -0.32
DDB1-224ENST00000545894 SARSP49591 514 aaKnown RBP13.07□□□□□ -0.32
DDB1-224ENST00000545894 ADKP55263 362 aaKnown RBP13.07□□□□□ -0.32
DDB1-224ENST00000545894 FMR1Q06787 632 aaKnown RBP eCLIP13.07□□□□□ -0.323e-9■■□□□ 12
DDB1-224ENST00000545894 RSRC2Q7L4I2 434 aaKnown RBP13.07□□□□□ -0.32
DDB1-224ENST00000545894 TRIML1Q8N9V2 468 aa13.07□□□□□ -0.32
DDB1-224ENST00000545894 KIFC2Q96AC6 838 aa13.07□□□□□ -0.32
DDB1-224ENST00000545894 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
DDB1-224ENST00000545894 FBXO2Q9UK22 296 aaPredicted RBP13.07□□□□□ -0.32
DDB1-224ENST00000545894 CACNA1SQ13698 1873 aa13.07□□□□□ -0.32
DDB1-224ENST00000545894 SNED1Q8TER0 1413 aa13.07□□□□□ -0.32
DDB1-224ENST00000545894 UBE2Q2LH0YL09 131 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 POLR3GO15318 223 aaPredicted RBP13.06□□□□□ -0.32
DDB1-224ENST00000545894 TBC1D8O95759 1140 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 MMP1P03956 469 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 YBX3P16989 372 aaKnown RBP eCLIP13.06□□□□□ -0.328e-12■□□□□ 11.1
DDB1-224ENST00000545894 MORC3Q14149 939 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 ALX1Q15699 326 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 EPC1Q9H2F5 836 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 PODXL2Q9NZ53 605 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 RAI14Q9P0K7 980 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 XDHP47989 1333 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 LRRC37AA6NMS7 1700 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 BTBD18B2RXH4 712 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
DDB1-224ENST00000545894 POLR2DO15514 142 aaKnown RBP13.06□□□□□ -0.32
DDB1-224ENST00000545894 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 PDE6AP16499 860 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 IFNAR1P17181 557 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 TOB1P50616 345 aaPredicted RBP13.06□□□□□ -0.32
DDB1-224ENST00000545894 RILPL1Q5EBL4 403 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 DPP8Q6V1X1 898 aaPredicted RBP13.06□□□□□ -0.32
DDB1-224ENST00000545894 DIS3L2Q8IYB7 885 aaKnown RBP13.06□□□□□ -0.32
DDB1-224ENST00000545894 RABGGTAQ92696 567 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 GPR101Q96P66 508 aaPredicted RBP13.06□□□□□ -0.32
DDB1-224ENST00000545894 STRBPQ96SI9 672 aaKnown RBP13.06□□□□□ -0.32
DDB1-224ENST00000545894 SERTAD1Q9UHV2 236 aa13.06□□□□□ -0.32
DDB1-224ENST00000545894 GOLGB1Q14789 3259 aaKnown RBP13.05□□□□□ -0.32
DDB1-224ENST00000545894 ECM29Q5VYK3 1845 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 SASH3O75995 380 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 FGFR2P21802 821 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 GRIN1Q05586 938 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 KANK3Q6NY19 840 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 TRMT44Q8IYL2 757 aaKnown RBP13.05□□□□□ -0.32
DDB1-224ENST00000545894 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
DDB1-224ENST00000545894 TBC1D16Q8TBP0 767 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 GOLGA1Q92805 767 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 AIDAQ96BJ3 306 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 FOXP1Q9H334 677 aaPredicted RBP13.05□□□□□ -0.32
DDB1-224ENST00000545894 ARFGAP3Q9NP61 516 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 GGA1Q9UJY5 639 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 ATP2B4P23634 1241 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 NR1I3Q14994 352 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 SOGA3Q5TF21 947 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 TRIM22Q8IYM9 498 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 PARD6BQ9BYG5 372 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 ZSWIM5Q9P217 1185 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 LEMD3Q9Y2U8 911 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 ZNF804BA4D1E1 1349 aa13.05□□□□□ -0.32
DDB1-224ENST00000545894 NID2Q14112 1375 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 TCRBV5S4A2TA0A5A2 114 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 UFL1O94874 794 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 CCDC175P0C221 793 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 KLRK1P26718 216 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 ERCC5P28715 1186 aaPredicted RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 PLCD1P51178 756 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 PUM3Q15397 648 aaKnown RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 JAKMIP3Q5VZ66 844 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 RTKN2Q8IZC4 609 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 DHX58Q96C10 678 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 DESI2Q9BSY9 194 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 CNNM2Q9H8M5 875 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 INCENPQ9NQS7 918 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 SAMSN1Q9NSI8 373 aaKnown RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 AKAP11Q9UKA4 1901 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 A0A1B0GTH6 734 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 PATL2C9JE40 543 aaKnown RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 AKR1B15C9JRZ8 316 aaPredicted RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 C6orf229H3BNL8 230 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 UQCRFS1P1P0C7P4 283 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 ARID4AP29374 1257 aaPredicted RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 OAS2P29728 719 aaKnown RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 GUCY1A2P33402 732 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 UBE4AQ14139 1066 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 SMC1AQ14683 1233 aaKnown RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 KARSQ15046 597 aaKnown RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 GRIPAP1Q4V328 841 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 IFNL3Q8IZI9 196 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 TXLNBQ8N3L3 684 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 CCDC12Q8WUD4 166 aaPredicted RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 PANX2Q96RD6 677 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 MED15Q96RN5 788 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 RTFDC1Q9BY42 306 aaPredicted RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 NAPBQ9H115 298 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 KCNJ14Q9UNX9 436 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms