RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 ACTL7BQ9Y614 415 aa11.97□□□□□ -0.49
MRPS35-204ENST00000542199 TET3O43151 1660 aa11.97□□□□□ -0.49
MRPS35-204ENST00000542199 FGRP09769 529 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 HSPA1LP34931 641 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 SOX9P48436 509 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 ERVK-24P63145 666 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 CLCQ05315 142 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 RING1Q06587 406 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 CCDC81Q6ZN84 652 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 GK5Q6ZS86 529 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 MCF2L2Q86YR7 1114 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 SREK1Q8WXA9 508 aaKnown RBP11.96□□□□□ -0.49
MRPS35-204ENST00000542199 MEGF10Q96KG7 1140 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 GMLQ99445 158 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 TANGO6Q9C0B7 1094 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 FAM105AQ9NUU6 356 aa11.96□□□□□ -0.49
MRPS35-204ENST00000542199 ZFYVE9O95405 1425 aa11.95□□□□□ -0.5
MRPS35-204ENST00000542199 NEFMP07197 916 aa11.95□□□□□ -0.5
MRPS35-204ENST00000542199 NTF4P34130 210 aa11.95□□□□□ -0.5
MRPS35-204ENST00000542199 GSK3AP49840 483 aa11.95□□□□□ -0.5
MRPS35-204ENST00000542199 DIEXFQ68CQ4 756 aaKnown RBP11.95□□□□□ -0.5
MRPS35-204ENST00000542199 CD163Q86VB7 1156 aa11.95□□□□□ -0.5
MRPS35-204ENST00000542199 PRKAG2Q9UGJ0 569 aa11.95□□□□□ -0.5
MRPS35-204ENST00000542199 PCDHB14Q9Y5E9 798 aa11.95□□□□□ -0.5
MRPS35-204ENST00000542199 RRBP1Q9P2E9 1410 aaKnown RBP11.94□□□□□ -0.5
MRPS35-204ENST00000542199 NUP155O75694 1391 aa11.94□□□□□ -0.5
MRPS35-204ENST00000542199 HCLS1P14317 486 aaPredicted RBP11.94□□□□□ -0.5
MRPS35-204ENST00000542199 TTLL4Q14679 1199 aa11.94□□□□□ -0.5
MRPS35-204ENST00000542199 TXNRD3Q86VQ6 643 aa11.94□□□□□ -0.5
MRPS35-204ENST00000542199 VPS37DQ86XT2 251 aa11.94□□□□□ -0.5
MRPS35-204ENST00000542199 SEC16BQ96JE7 1060 aa11.94□□□□□ -0.5
MRPS35-204ENST00000542199 SPATA32Q96LK8 384 aa11.94□□□□□ -0.5
MRPS35-204ENST00000542199 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■■□ 23.3
MRPS35-204ENST00000542199 IQGAP3Q86VI3 1631 aa11.93□□□□□ -0.5
MRPS35-204ENST00000542199 C1QTNF9BB2RNN3 333 aa11.93□□□□□ -0.5
MRPS35-204ENST00000542199 KCNA6P17658 529 aa11.93□□□□□ -0.5
MRPS35-204ENST00000542199 GRK4P32298 578 aa11.93□□□□□ -0.5
MRPS35-204ENST00000542199 ZBTB37Q5TC79 503 aa11.93□□□□□ -0.5
MRPS35-204ENST00000542199 UBE3DQ7Z6J8 389 aa11.93□□□□□ -0.5
MRPS35-204ENST00000542199 SLC26A8Q96RN1 970 aa11.93□□□□□ -0.5
MRPS35-204ENST00000542199 CEP41Q9BYV8 373 aa11.93□□□□□ -0.5
MRPS35-204ENST00000542199 ATXN3LQ9H3M9 355 aa11.93□□□□□ -0.5
MRPS35-204ENST00000542199 GSX1Q9H4S2 264 aaPredicted RBP11.93□□□□□ -0.5
MRPS35-204ENST00000542199 PICK1Q9NRD5 415 aa11.93□□□□□ -0.5
MRPS35-204ENST00000542199 GCC2Q8IWJ2 1684 aa11.92□□□□□ -0.5
MRPS35-204ENST00000542199 ASPAP45381 313 aa11.92□□□□□ -0.5
MRPS35-204ENST00000542199 FAM46AQ96IP4 442 aaKnown RBP11.92□□□□□ -0.5
MRPS35-204ENST00000542199 RIMS2Q9UQ26 1411 aa11.92□□□□□ -0.5
MRPS35-204ENST00000542199 PLEKHG1Q9ULL1 1385 aa11.92□□□□□ -0.5
MRPS35-204ENST00000542199 TMEM131LA2VDJ0 1609 aa11.91□□□□□ -0.5
MRPS35-204ENST00000542199 SART1O43290 800 aaKnown RBP11.91□□□□□ -0.5
MRPS35-204ENST00000542199 IGSF3O75054 1194 aa11.91□□□□□ -0.5
MRPS35-204ENST00000542199 HTR3BO95264 441 aa11.91□□□□□ -0.5
MRPS35-204ENST00000542199 ZNF165P49910 485 aa11.91□□□□□ -0.5
MRPS35-204ENST00000542199 COL9A2Q14055 689 aaPredicted RBP11.91□□□□□ -0.5
MRPS35-204ENST00000542199 REXO1Q8N1G1 1221 aaKnown RBP11.91□□□□□ -0.5
MRPS35-204ENST00000542199 RNF214Q8ND24 703 aa11.91□□□□□ -0.5
MRPS35-204ENST00000542199 TMEM94Q12767 1356 aa11.91□□□□□ -0.5
MRPS35-204ENST00000542199 E9PCH4 1651 aa11.91□□□□□ -0.5
MRPS35-204ENST00000542199 GAS2O43903 313 aaKnown RBP11.9□□□□□ -0.5
MRPS35-204ENST00000542199 RAB6AP20340 208 aa11.9□□□□□ -0.5
MRPS35-204ENST00000542199 ETF1P62495 437 aaKnown RBP11.9□□□□□ -0.5
MRPS35-204ENST00000542199 RASSF7Q02833 373 aa11.9□□□□□ -0.5
MRPS35-204ENST00000542199 SGO2Q562F6 1265 aa11.9□□□□□ -0.5
MRPS35-204ENST00000542199 CDPF1Q6NVV7 123 aa11.9□□□□□ -0.5
MRPS35-204ENST00000542199 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
MRPS35-204ENST00000542199 ISL2Q96A47 359 aa11.9□□□□□ -0.5
MRPS35-204ENST00000542199 FERD3LQ96RJ6 166 aa11.9□□□□□ -0.5
MRPS35-204ENST00000542199 WNT10AQ9GZT5 417 aa11.9□□□□□ -0.5
MRPS35-204ENST00000542199 FBRSQ9HAH7 460 aa11.9□□□□□ -0.5
MRPS35-204ENST00000542199 USP35Q9P2H5 1018 aa11.9□□□□□ -0.5
MRPS35-204ENST00000542199 REV1Q9UBZ9 1251 aa11.9□□□□□ -0.5
MRPS35-204ENST00000542199 PPP1R1BQ9UD71 204 aaPredicted RBP11.9□□□□□ -0.5
MRPS35-204ENST00000542199 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
MRPS35-204ENST00000542199 DNAJA2O60884 412 aa11.89□□□□□ -0.51
MRPS35-204ENST00000542199 PGRP06401 933 aa11.89□□□□□ -0.51
MRPS35-204ENST00000542199 PLCG1P19174 1290 aa11.89□□□□□ -0.51
MRPS35-204ENST00000542199 KCNMA1Q12791 1236 aa11.89□□□□□ -0.51
MRPS35-204ENST00000542199 SF3A1Q15459 793 aaKnown RBP11.89□□□□□ -0.51
MRPS35-204ENST00000542199 ARMC10Q8N2F6 343 aa11.89□□□□□ -0.51
MRPS35-204ENST00000542199 ANTXR1Q9H6X2 564 aa11.89□□□□□ -0.51
MRPS35-204ENST00000542199 EHMT1Q9H9B1 1298 aa11.89□□□□□ -0.51
MRPS35-204ENST00000542199 PIDD1Q9HB75 910 aa11.89□□□□□ -0.51
MRPS35-204ENST00000542199 ZNRF3Q9ULT6 936 aa11.89□□□□□ -0.51
MRPS35-204ENST00000542199 NKTRP30414 1462 aaKnown RBP11.89□□□□□ -0.51
MRPS35-204ENST00000542199 NWD1Q149M9 1564 aa11.88□□□□□ -0.51
MRPS35-204ENST00000542199 NAIPQ13075 1403 aa11.88□□□□□ -0.51
MRPS35-204ENST00000542199 FANCGO15287 622 aa11.88□□□□□ -0.51
MRPS35-204ENST00000542199 RNGTTO60942 597 aaKnown RBP11.88□□□□□ -0.51
MRPS35-204ENST00000542199 FBXW10Q5XX13 1052 aa11.88□□□□□ -0.51
MRPS35-204ENST00000542199 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.88□□□□□ -0.51
MRPS35-204ENST00000542199 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.88□□□□□ -0.51
MRPS35-204ENST00000542199 DHX38Q92620 1227 aaKnown RBP11.88□□□□□ -0.51
MRPS35-204ENST00000542199 SRRTQ9BXP5 876 aaKnown RBP11.88□□□□□ -0.51
MRPS35-204ENST00000542199 TACC3Q9Y6A5 838 aa11.88□□□□□ -0.51
MRPS35-204ENST00000542199 MRVI1Q9Y6F6 885 aa11.88□□□□□ -0.51
MRPS35-204ENST00000542199 ATE1O95260 518 aa11.87□□□□□ -0.51
MRPS35-204ENST00000542199 ITGB2P05107 769 aa11.87□□□□□ -0.51
MRPS35-204ENST00000542199 FBLIM1Q8WUP2 373 aa11.87□□□□□ -0.51
MRPS35-204ENST00000542199 UTP4Q969X6 686 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms