RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-215	ENST00000537551	FAM47A	Q5JRC9	791 aa		27.59	■■■□□ 2.01
CHFR-215	ENST00000537551	GPRC5A	Q8NFJ5	357 aa		27.59	■■■□□ 2.01
CHFR-215	ENST00000537551	GOPC	Q9HD26	462 aa		27.59	■■■□□ 2.01
CHFR-215	ENST00000537551	MORF4L1	Q9UBU8	362 aa		27.59	■■■□□ 2.01
CHFR-215	ENST00000537551	ANAPC4	Q9UJX5	808 aa		27.59	■■■□□ 2.01
CHFR-215	ENST00000537551	MYPN	Q86TC9	1320 aa		27.59	■■■□□ 2.01
CHFR-215	ENST00000537551	CENPB	P07199	599 aa	Predicted RBP	27.58	■■■□□ 2.01
CHFR-215	ENST00000537551	KIAA1755	Q5JYT7	1200 aa		27.58	■■■□□ 2.01
CHFR-215	ENST00000537551	RAET1E	Q8TD07	263 aa		27.58	■■■□□ 2.01
CHFR-215	ENST00000537551	COA7	Q96BR5	231 aa		27.58	■■■□□ 2.01
CHFR-215	ENST00000537551	INCENP	Q9NQS7	918 aa		27.58	■■■□□ 2.01
CHFR-215	ENST00000537551	TOMM22	Q9NS69	142 aa		27.58	■■■□□ 2.01
CHFR-215	ENST00000537551	NYAP2	Q9P242	653 aa		27.58	■■■□□ 2.01
CHFR-215	ENST00000537551	RBPJL	Q9UBG7	517 aa		27.58	■■■□□ 2.01
CHFR-215	ENST00000537551	CLIP2	Q9UDT6	1046 aa		27.58	■■■□□ 2.01
CHFR-215	ENST00000537551	PEX10	O60683	326 aa		27.57	■■■□□ 2
CHFR-215	ENST00000537551	NEDD1	Q8NHV4	660 aa		27.57	■■■□□ 2
CHFR-215	ENST00000537551	TXNRD2	Q9NNW7	524 aa		27.57	■■■□□ 2
CHFR-215	ENST00000537551	TSPY2	A6NKD2	308 aa		27.56	■■■□□ 2
CHFR-215	ENST00000537551	HAND2	P61296	217 aa		27.56	■■■□□ 2
CHFR-215	ENST00000537551	PRKCZ	Q05513	592 aa		27.56	■■■□□ 2
CHFR-215	ENST00000537551	COG2	Q14746	738 aa		27.56	■■■□□ 2
CHFR-215	ENST00000537551	SLC9C1	Q4G0N8	1177 aa		27.56	■■■□□ 2
CHFR-215	ENST00000537551	NBPF11	Q86T75	865 aa		27.56	■■■□□ 2
CHFR-215	ENST00000537551	CCAR1	Q8IX12	1150 aa	Known RBP	27.56	■■■□□ 2
CHFR-215	ENST00000537551	CEP95	Q96GE4	821 aa		27.56	■■■□□ 2
CHFR-215	ENST00000537551	HOXC10	Q9NYD6	342 aa		27.56	■■■□□ 2
CHFR-215	ENST00000537551	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	27.56	■■■□□ 2
CHFR-215	ENST00000537551	ZMYM6	O95789	1325 aa		27.56	■■■□□ 2
CHFR-215	ENST00000537551	IGKV6D-41	A0A0C4DH26	115 aa		27.55	■■■□□ 2
CHFR-215	ENST00000537551	WDR46	O15213	610 aa	Known RBP	27.55	■■■□□ 2
CHFR-215	ENST00000537551	RANBP6	O60518	1105 aa	Known RBP	27.55	■■■□□ 2
CHFR-215	ENST00000537551	ERVK-9	P63128	1117 aa		27.55	■■■□□ 2
CHFR-215	ENST00000537551	ERVK-24	P63145	666 aa		27.55	■■■□□ 2
CHFR-215	ENST00000537551	RUFY2	Q8WXA3	655 aa		27.55	■■■□□ 2
CHFR-215	ENST00000537551	MTMR4	Q9NYA4	1195 aa		27.55	■■■□□ 2
CHFR-215	ENST00000537551	RABGAP1	Q9Y3P9	1069 aa		27.55	■■■□□ 2
CHFR-215	ENST00000537551		Q3C1V9	767 aa		27.54	■■■□□ 2
CHFR-215	ENST00000537551	RRP12	Q5JTH9	1297 aa	Known RBP	27.54	■■■□□ 2
CHFR-215	ENST00000537551	SAMD1	Q6SPF0	538 aa	Predicted RBP	27.54	■■■□□ 2
CHFR-215	ENST00000537551	GABRQ	Q9UN88	632 aa		27.54	■■■□□ 2
CHFR-215	ENST00000537551	MGAM	O43451	1857 aa		27.53	■■■□□ 2
CHFR-215	ENST00000537551	SPDYE16	A6NNV3	312 aa	Predicted RBP	27.53	■■■□□ 2
CHFR-215	ENST00000537551	FLOT1	O75955	427 aa		27.53	■■■□□ 2
CHFR-215	ENST00000537551	TTLL1	O95922	423 aa		27.53	■■■□□ 2
CHFR-215	ENST00000537551	CHML	P26374	656 aa		27.53	■■■□□ 2
CHFR-215	ENST00000537551	SOX10	P56693	466 aa		27.53	■■■□□ 2
CHFR-215	ENST00000537551	DSCC1	Q9BVC3	393 aa		27.53	■■■□□ 2
CHFR-215	ENST00000537551	TACC3	Q9Y6A5	838 aa		27.53	■■■□□ 2
CHFR-215	ENST00000537551	GREB1L	Q9C091	1923 aa	Predicted RBP	27.52	■■■□□ 2
CHFR-215	ENST00000537551	ZNF213	O14771	459 aa		27.52	■■■□□ 2
CHFR-215	ENST00000537551	ORC4	O43929	436 aa		27.52	■■■□□ 2
CHFR-215	ENST00000537551	FLT3LG	P49771	235 aa		27.52	■■■□□ 2
CHFR-215	ENST00000537551	POTEE	Q6S8J3	1075 aa		27.52	■■■□□ 2
CHFR-215	ENST00000537551	LBX2	Q6XYB7	198 aa		27.52	■■■□□ 2
CHFR-215	ENST00000537551	CWC22	Q9HCG8	908 aa	Known RBP	27.52	■■■□□ 2
CHFR-215	ENST00000537551	PLIN4	Q96Q06	1357 aa		27.51	■■□□□ 1.99
CHFR-215	ENST00000537551		F5H6K3	240 aa		27.51	■■□□□ 1.99
CHFR-215	ENST00000537551	FGR	P09769	529 aa		27.51	■■□□□ 1.99
CHFR-215	ENST00000537551	CCNA1	P78396	465 aa		27.51	■■□□□ 1.99
CHFR-215	ENST00000537551	KLRC3	Q07444	240 aa		27.51	■■□□□ 1.99
CHFR-215	ENST00000537551	PPP4R3B	Q5MIZ7	849 aa		27.51	■■□□□ 1.99
CHFR-215	ENST00000537551	MFSD6	Q6ZSS7	791 aa		27.51	■■□□□ 1.99
CHFR-215	ENST00000537551	SKAP1	Q86WV1	359 aa		27.51	■■□□□ 1.99
CHFR-215	ENST00000537551	SH3TC2	Q8TF17	1288 aa		27.51	■■□□□ 1.99
CHFR-215	ENST00000537551	MKL1	Q969V6	931 aa		27.51	■■□□□ 1.99
CHFR-215	ENST00000537551	ARMC5	Q96C12	935 aa		27.51	■■□□□ 1.99
CHFR-215	ENST00000537551	RAD50	Q92878	1312 aa		27.5	■■□□□ 1.99
CHFR-215	ENST00000537551	CNMD	O75829	334 aa		27.5	■■□□□ 1.99
CHFR-215	ENST00000537551	MAPK4	P31152	587 aa		27.5	■■□□□ 1.99
CHFR-215	ENST00000537551	DSG3	P32926	999 aa		27.5	■■□□□ 1.99
CHFR-215	ENST00000537551	FAM83B	Q5T0W9	1011 aa		27.5	■■□□□ 1.99
CHFR-215	ENST00000537551	AKNAD1	Q5T1N1	836 aa		27.5	■■□□□ 1.99
CHFR-215	ENST00000537551	RNF41	Q9H4P4	317 aa	Predicted RBP	27.5	■■□□□ 1.99
CHFR-215	ENST00000537551	CTNNA3	Q9UI47	895 aa		27.5	■■□□□ 1.99
CHFR-215	ENST00000537551	GRK4	P32298	578 aa		27.49	■■□□□ 1.99
CHFR-215	ENST00000537551	LRRC47	Q8N1G4	583 aa	Known RBP	27.49	■■□□□ 1.99
CHFR-215	ENST00000537551	IL25	Q9H293	177 aa		27.49	■■□□□ 1.99
CHFR-215	ENST00000537551	BTBD7	Q9P203	1132 aa		27.49	■■□□□ 1.99
CHFR-215	ENST00000537551	BIN2	Q9UBW5	565 aa	Predicted RBP	27.49	■■□□□ 1.99
CHFR-215	ENST00000537551	STX8	Q9UNK0	236 aa		27.49	■■□□□ 1.99
CHFR-215	ENST00000537551	NDUFB10	O96000	172 aa		27.48	■■□□□ 1.99
CHFR-215	ENST00000537551	MYC	P01106	439 aa	Predicted RBP	27.48	■■□□□ 1.99
CHFR-215	ENST00000537551	PC	P11498	1178 aa	Known RBP	27.48	■■□□□ 1.99
CHFR-215	ENST00000537551	IMMT	Q16891	758 aa	Known RBP	27.48	■■□□□ 1.99
CHFR-215	ENST00000537551	WDR78	Q5VTH9	848 aa		27.48	■■□□□ 1.99
CHFR-215	ENST00000537551	STAG1	Q8WVM7	1258 aa		27.48	■■□□□ 1.99
CHFR-215	ENST00000537551	NUP88	Q99567	741 aa	Predicted RBP	27.48	■■□□□ 1.99
CHFR-215	ENST00000537551	PORCN	Q9H237	461 aa		27.48	■■□□□ 1.99
CHFR-215	ENST00000537551	ADCY3	O60266	1144 aa		27.47	■■□□□ 1.99
CHFR-215	ENST00000537551	NMT2	O60551	498 aa		27.47	■■□□□ 1.99
CHFR-215	ENST00000537551	TBC1D10C	Q8IV04	446 aa		27.47	■■□□□ 1.99
CHFR-215	ENST00000537551	MB21D1	Q8N884	522 aa		27.47	■■□□□ 1.99
CHFR-215	ENST00000537551	ATG4C	Q96DT6	458 aa		27.47	■■□□□ 1.99
CHFR-215	ENST00000537551	ZNF333	Q96JL9	665 aa		27.47	■■□□□ 1.99
CHFR-215	ENST00000537551	IL17RB	Q9NRM6	502 aa		27.47	■■□□□ 1.99
CHFR-215	ENST00000537551	SYNPO2	Q9UMS6	1093 aa		27.47	■■□□□ 1.99
CHFR-215	ENST00000537551	IRF5	Q13568	498 aa		27.46	■■□□□ 1.99
CHFR-215	ENST00000537551	PLS1	Q14651	629 aa		27.46	■■□□□ 1.99
CHFR-215	ENST00000537551	SLAIN1	Q8ND83	568 aa		27.46	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms