RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CABP5Q9NP86 173 aa11.57□□□□□ -0.56
SSBP3-215ENST00000533946 PNMA3Q9UL41 463 aa11.57□□□□□ -0.56
SSBP3-215ENST00000533946 A0A0G2JMZ2 1700 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 NMT2O60551 498 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 GLRX3O76003 335 aaKnown RBP11.56□□□□□ -0.56
SSBP3-215ENST00000533946 GNRH1P01148 92 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 TAL1P17542 331 aaPredicted RBP11.56□□□□□ -0.56
SSBP3-215ENST00000533946 MNX1P50219 401 aaPredicted RBP11.56□□□□□ -0.56
SSBP3-215ENST00000533946 ICA1Q05084 483 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 SBK1Q52WX2 424 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 MORN1Q5T089 497 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 GPR142Q7Z601 462 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 UBE2Q1Q7Z7E8 422 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 NBPF11Q86T75 865 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 CERS3Q8IU89 383 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 PLEKHM2Q8IWE5 1019 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 GPRC5AQ8NFJ5 357 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 NPLOC4Q8TAT6 608 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 DEFB118Q96PH6 123 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 TMEM106CQ9BVX2 250 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 GINM1Q9NU53 330 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 LAMA3Q16787 3333 aa11.56□□□□□ -0.56
SSBP3-215ENST00000533946 MYH4Q9Y623 1939 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 IGKV6D-41A0A0C4DH26 115 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 PATL2C9JE40 543 aaKnown RBP11.55□□□□□ -0.56
SSBP3-215ENST00000533946 APPP05067 770 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 HOXD10P28358 340 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 CCND3P30281 292 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-215ENST00000533946 PRMT2P55345 433 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 NMIQ13287 307 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-215ENST00000533946 ARHGEF6Q15052 776 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 ZSCAN25Q6NSZ9 544 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 TMED8Q6PL24 325 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-215ENST00000533946 TMEM179Q6ZVK1 233 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 COA7Q96BR5 231 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 GPATCH3Q96I76 525 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 TANGO6Q9C0B7 1094 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 NBPF3Q9H094 633 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 TMX2Q9Y320 296 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 SMCHD1A6NHR9 2005 aa11.55□□□□□ -0.56
SSBP3-215ENST00000533946 ZNFX1Q9P2E3 1918 aaKnown RBP11.54□□□□□ -0.56
SSBP3-215ENST00000533946 RAD21O60216 631 aa11.54□□□□□ -0.56
SSBP3-215ENST00000533946 NUCB1Q02818 461 aa11.54□□□□□ -0.56
SSBP3-215ENST00000533946 PABPC4Q13310 644 aaKnown RBP eCLIP11.54□□□□□ -0.562e-66■■■■■ 36.3
SSBP3-215ENST00000533946 IRF5Q13568 498 aa11.54□□□□□ -0.56
SSBP3-215ENST00000533946 FAM83BQ5T0W9 1011 aa11.54□□□□□ -0.56
SSBP3-215ENST00000533946 CHD1LQ86WJ1 897 aa11.54□□□□□ -0.56
SSBP3-215ENST00000533946 SLAIN1Q8ND83 568 aa11.54□□□□□ -0.56
SSBP3-215ENST00000533946 TRPV1Q8NER1 839 aa11.54□□□□□ -0.56
SSBP3-215ENST00000533946 U2AF1L4Q8WU68 220 aaKnown RBP11.54□□□□□ -0.56
SSBP3-215ENST00000533946 GCC1Q96CN9 775 aa11.54□□□□□ -0.56
SSBP3-215ENST00000533946 MOV10L1Q9BXT6 1211 aaKnown RBP11.54□□□□□ -0.56
SSBP3-215ENST00000533946 VCPKMTQ9H867 229 aa11.54□□□□□ -0.56
SSBP3-215ENST00000533946 SWAP70Q9UH65 585 aa11.54□□□□□ -0.56
SSBP3-215ENST00000533946 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
SSBP3-215ENST00000533946 COBLO75128 1261 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 GJB1P08034 283 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 DSG3P32926 999 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 GJA8P48165 433 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 TDO2P48775 406 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 CACNB2Q08289 660 aaPredicted RBP11.53□□□□□ -0.56
SSBP3-215ENST00000533946 TMEM132BQ14DG7 1078 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 WDR78Q5VTH9 848 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 LBX2Q6XYB7 198 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 PLEKHH3Q7Z736 793 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 LRRC47Q8N1G4 583 aaKnown RBP11.53□□□□□ -0.56
SSBP3-215ENST00000533946 PXYLP1Q8TE99 480 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 CEP95Q96GE4 821 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 PAK6Q9NQU5 681 aaPredicted RBP11.53□□□□□ -0.56
SSBP3-215ENST00000533946 IL17RBQ9NRM6 502 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 RABGAP1Q9Y3P9 1069 aa11.53□□□□□ -0.56
SSBP3-215ENST00000533946 DDX49Q9Y6V7 483 aaKnown RBP11.53□□□□□ -0.56
SSBP3-215ENST00000533946 H0YGN5 161 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 ERC2O15083 957 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 SGPL1O95470 568 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 ZFYP08048 801 aaPredicted RBP11.52□□□□□ -0.57
SSBP3-215ENST00000533946 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.57
SSBP3-215ENST00000533946 PTPREP23469 700 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 USP14P54578 494 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 SNAP25P60880 206 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 HAND2P61296 217 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 PPARAQ07869 468 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 COG2Q14746 738 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 PRAMEF19Q5SWL8 479 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 MAP3K21Q5TCX8 1036 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 REPS2Q8NFH8 660 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 RILPL2Q969X0 211 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.52□□□□□ -0.578e-9■■■■□ 19.6
SSBP3-215ENST00000533946 MKNK2Q9HBH9 465 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 ARPP21Q9UBL0 812 aaPredicted RBP11.52□□□□□ -0.57
SSBP3-215ENST00000533946 CLIP2Q9UDT6 1046 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.52□□□□□ -0.576e-6■■□□□ 13.9
SSBP3-215ENST00000533946 RIPK3Q9Y572 518 aa11.52□□□□□ -0.57
SSBP3-215ENST00000533946 RBAK-RBAKDNI3L0D1 243 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 FLOT1O75955 427 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 NDUFB10O96000 172 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 IGHA2P01877 340 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 GSPT1P15170 499 aaKnown RBP11.51□□□□□ -0.57
SSBP3-215ENST00000533946 ERCC3P19447 782 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 CYP2C19P33261 490 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms