RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 FBXL16Q8N461 479 aa20.66■□□□□ 0.9
CTSB-222ENST00000531551 MKL1Q969V6 931 aa20.66■□□□□ 0.9
CTSB-222ENST00000531551 ISY1Q9ULR0 285 aaKnown RBP20.66■□□□□ 0.9
CTSB-222ENST00000531551 TMX2Q9Y320 296 aa20.66■□□□□ 0.9
CTSB-222ENST00000531551 ZNF157P51786 506 aaPredicted RBP20.65■□□□□ 0.9
CTSB-222ENST00000531551 STK3Q13188 491 aa20.65■□□□□ 0.9
CTSB-222ENST00000531551 MICU3Q86XE3 530 aa20.65■□□□□ 0.9
CTSB-222ENST00000531551 CCDC144CPQ8IYA2 1237 aa20.65■□□□□ 0.9
CTSB-222ENST00000531551 WDR18Q9BV38 432 aa20.65■□□□□ 0.9
CTSB-222ENST00000531551 TPCN1Q9ULQ1 816 aa20.65■□□□□ 0.9
CTSB-222ENST00000531551 AFG3L2Q9Y4W6 797 aa20.65■□□□□ 0.9
CTSB-222ENST00000531551 TLL2Q9Y6L7 1015 aa20.65■□□□□ 0.9
CTSB-222ENST00000531551 DOCK1Q14185 1865 aa20.65■□□□□ 0.9
CTSB-222ENST00000531551 GOLGA8BA8MQT2 603 aa20.64■□□□□ 0.9
CTSB-222ENST00000531551 IRF6O14896 467 aa20.64■□□□□ 0.9
CTSB-222ENST00000531551 DGKZQ13574 1117 aa20.64■□□□□ 0.9
CTSB-222ENST00000531551 PAXIP1Q6ZW49 1069 aaPredicted RBP20.64■□□□□ 0.9
CTSB-222ENST00000531551 SPICE1Q8N0Z3 855 aa20.64■□□□□ 0.9
CTSB-222ENST00000531551 TBC1D2Q9BYX2 928 aa20.64■□□□□ 0.9
CTSB-222ENST00000531551 GOPCQ9HD26 462 aa20.64■□□□□ 0.9
CTSB-222ENST00000531551 F5H6K3 240 aa20.64■□□□□ 0.89
CTSB-222ENST00000531551 ZBTB43O43298 467 aa20.64■□□□□ 0.89
CTSB-222ENST00000531551 APLP1P51693 650 aa20.64■□□□□ 0.89
CTSB-222ENST00000531551 KLRC3Q07444 240 aa20.64■□□□□ 0.89
CTSB-222ENST00000531551 APOA5Q6Q788 366 aa20.64■□□□□ 0.89
CTSB-222ENST00000531551 LIMCH1Q9UPQ0 1083 aa20.64■□□□□ 0.89
CTSB-222ENST00000531551 OTOFQ9HC10 1997 aa20.64■□□□□ 0.89
CTSB-222ENST00000531551 GREB1LQ9C091 1923 aaPredicted RBP20.63■□□□□ 0.89
CTSB-222ENST00000531551 TRPM7Q96QT4 1865 aa20.63■□□□□ 0.89
CTSB-222ENST00000531551 ATAD5Q96QE3 1844 aa20.63■□□□□ 0.89
CTSB-222ENST00000531551 BACE1P56817 501 aa20.63■□□□□ 0.89
CTSB-222ENST00000531551 PPIL2Q13356 520 aa20.63■□□□□ 0.89
CTSB-222ENST00000531551 SLFN13Q68D06 897 aa20.63■□□□□ 0.89
CTSB-222ENST00000531551 RGMBQ6NW40 437 aa20.63■□□□□ 0.89
CTSB-222ENST00000531551 RASGRP2Q7LDG7 609 aa20.63■□□□□ 0.89
CTSB-222ENST00000531551 IL27Q8NEV9 243 aa20.63■□□□□ 0.89
CTSB-222ENST00000531551 RBM19Q9Y4C8 960 aaKnown RBP20.63■□□□□ 0.89
CTSB-222ENST00000531551 MCM2P49736 904 aa20.62■□□□□ 0.89
CTSB-222ENST00000531551 HMGCS2P54868 508 aa20.62■□□□□ 0.89
CTSB-222ENST00000531551 CCT2P78371 535 aaKnown RBP20.62■□□□□ 0.89
CTSB-222ENST00000531551 GRM1Q13255 1194 aa20.62■□□□□ 0.89
CTSB-222ENST00000531551 WNK4Q96J92 1243 aa20.62■□□□□ 0.89
CTSB-222ENST00000531551 KIAA1683Q9H0B3 1180 aa20.62■□□□□ 0.89
CTSB-222ENST00000531551 VCPKMTQ9H867 229 aa20.62■□□□□ 0.89
CTSB-222ENST00000531551 PDIA3P30101 505 aaKnown RBP20.62■□□□□ 0.89
CTSB-222ENST00000531551 GJA5P36382 358 aa20.62■□□□□ 0.89
CTSB-222ENST00000531551 USP14P54578 494 aa20.62■□□□□ 0.89
CTSB-222ENST00000531551 HSCBQ8IWL3 235 aa20.62■□□□□ 0.89
CTSB-222ENST00000531551 GOLGA8AA7E2F4 631 aa20.61■□□□□ 0.89
CTSB-222ENST00000531551 DDAH1O94760 285 aa20.61■□□□□ 0.89
CTSB-222ENST00000531551 LARGE1O95461 756 aa20.61■□□□□ 0.89
CTSB-222ENST00000531551 NDUFB10O96000 172 aa20.61■□□□□ 0.89
CTSB-222ENST00000531551 METAP2P50579 478 aaKnown RBP eCLIP20.61■□□□□ 0.891e-6■■■■□ 23.7
CTSB-222ENST00000531551 TROAPQ12815 778 aa20.61■□□□□ 0.89
CTSB-222ENST00000531551 ME3Q16798 604 aa20.61■□□□□ 0.89
CTSB-222ENST00000531551 CCDC96Q2M329 555 aa20.61■□□□□ 0.89
CTSB-222ENST00000531551 ZNF274Q96GC6 653 aaPredicted RBP20.61■□□□□ 0.89
CTSB-222ENST00000531551 SLKQ9H2G2 1235 aaPredicted RBP20.61■□□□□ 0.89
CTSB-222ENST00000531551 TMOD4Q9NZQ9 345 aa20.61■□□□□ 0.89
CTSB-222ENST00000531551 FRMPD2Q68DX3 1309 aaPredicted RBP20.61■□□□□ 0.89
CTSB-222ENST00000531551 C19orf81C9J6K1 198 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 GOLGA8HP0CJ92 632 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 CALM1P0DP23 149 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 CALM2P0DP24 149 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 CALM3P0DP25 149 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 PDHBP11177 359 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 ANP32AP39687 249 aaKnown RBP20.6■□□□□ 0.89
CTSB-222ENST00000531551 SLC1A4P43007 532 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 EVCP57679 992 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 KIAA1755Q5JYT7 1200 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 USP17L2Q6R6M4 530 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 NECAB1Q8N987 351 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 GMCL1P1Q8NEA9 526 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 CTCFLQ8NI51 663 aaPredicted RBP20.6■□□□□ 0.89
CTSB-222ENST00000531551 NUP88Q99567 741 aaPredicted RBP20.6■□□□□ 0.89
CTSB-222ENST00000531551 EMILIN3Q9NT22 766 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 SPRYD7Q5W111 196 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 RASAL3Q86YV0 1011 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 CREBZFQ9NS37 354 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 SYNPO2Q9UMS6 1093 aa20.6■□□□□ 0.89
CTSB-222ENST00000531551 CXCL11O14625 94 aa20.59■□□□□ 0.89
CTSB-222ENST00000531551 PARP1P09874 1014 aaKnown RBP20.59■□□□□ 0.89
CTSB-222ENST00000531551 GADL1Q6ZQY3 521 aa20.59■□□□□ 0.89
CTSB-222ENST00000531551 KCTD1Q719H9 257 aa20.59■□□□□ 0.89
CTSB-222ENST00000531551 FANCBQ8NB91 859 aa20.59■□□□□ 0.89
CTSB-222ENST00000531551 SNX21Q969T3 373 aa20.59■□□□□ 0.89
CTSB-222ENST00000531551 ZSCAN31Q96LW9 406 aaPredicted RBP20.59■□□□□ 0.89
CTSB-222ENST00000531551 NCOA5Q9HCD5 579 aaKnown RBP20.59■□□□□ 0.89
CTSB-222ENST00000531551 HPS5Q9UPZ3 1129 aa20.59■□□□□ 0.89
CTSB-222ENST00000531551 SNAPC2Q13487 334 aa20.58■□□□□ 0.89
CTSB-222ENST00000531551 RTN1Q16799 776 aa20.58■□□□□ 0.89
CTSB-222ENST00000531551 TMX3Q96JJ7 454 aa20.58■□□□□ 0.89
CTSB-222ENST00000531551 GPCPD1Q9NPB8 672 aa20.58■□□□□ 0.89
CTSB-222ENST00000531551 KCNH4Q9UQ05 1017 aa20.58■□□□□ 0.89
CTSB-222ENST00000531551 ZBTB48P10074 688 aaPredicted RBP20.58■□□□□ 0.88
CTSB-222ENST00000531551 BMP3P12645 472 aa20.58■□□□□ 0.88
CTSB-222ENST00000531551 FAM83BQ5T0W9 1011 aa20.58■□□□□ 0.88
CTSB-222ENST00000531551 DCAF4Q8WV16 495 aa20.58■□□□□ 0.88
CTSB-222ENST00000531551 LPAR1Q92633 364 aa20.58■□□□□ 0.88
CTSB-222ENST00000531551 A0A0G2JLL6 359 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms