RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 PPIGQ13427 754 aaKnown RBP eCLIP21.56■■□□□ 1.04
PVT1-220ENST00000524165 RAB30Q15771 203 aa21.56■■□□□ 1.04
PVT1-220ENST00000524165 TMEM31Q5JXX7 168 aa21.56■■□□□ 1.04
PVT1-220ENST00000524165 MFSD5Q6N075 450 aa21.56■■□□□ 1.04
PVT1-220ENST00000524165 XAGE2Q96GT9 111 aa21.56■■□□□ 1.04
PVT1-220ENST00000524165 KIAA1683Q9H0B3 1180 aa21.56■■□□□ 1.04
PVT1-220ENST00000524165 EPHX3Q9H6B9 360 aa21.56■■□□□ 1.04
PVT1-220ENST00000524165 NRBP1Q9UHY1 535 aa21.56■■□□□ 1.04
PVT1-220ENST00000524165 FLT1P17948 1338 aa21.55■■□□□ 1.04
PVT1-220ENST00000524165 A0A1B0GUL7 405 aa21.55■■□□□ 1.04
PVT1-220ENST00000524165 COBLO75128 1261 aa21.55■■□□□ 1.04
PVT1-220ENST00000524165 BAG3O95817 575 aa21.55■■□□□ 1.04
PVT1-220ENST00000524165 GH2P01242 217 aa21.55■■□□□ 1.04
PVT1-220ENST00000524165 RARBP10826 455 aa21.55■■□□□ 1.04
PVT1-220ENST00000524165 TMEM240Q5SV17 173 aa21.55■■□□□ 1.04
PVT1-220ENST00000524165 C16orf59Q7L2K0 433 aa21.55■■□□□ 1.04
PVT1-220ENST00000524165 SPATA5Q8NB90 893 aa21.55■■□□□ 1.04
PVT1-220ENST00000524165 SHCBP1Q8NEM2 672 aa21.55■■□□□ 1.04
PVT1-220ENST00000524165 MOV10L1Q9BXT6 1211 aaKnown RBP21.55■■□□□ 1.04
PVT1-220ENST00000524165 MSRAQ9UJ68 235 aa21.55■■□□□ 1.04
PVT1-220ENST00000524165 ATF7IPQ6VMQ6 1270 aa21.54■■□□□ 1.04
PVT1-220ENST00000524165 TBC1D9Q6ZT07 1266 aa21.54■■□□□ 1.04
PVT1-220ENST00000524165 MAPKAPK5Q8IW41 473 aa21.54■■□□□ 1.04
PVT1-220ENST00000524165 MRPL50Q8N5N7 158 aaKnown RBP21.54■■□□□ 1.04
PVT1-220ENST00000524165 TGFBRAP1Q8WUH2 860 aa21.54■■□□□ 1.04
PVT1-220ENST00000524165 COPRSQ9NQ92 184 aa21.54■■□□□ 1.04
PVT1-220ENST00000524165 PALD1Q9ULE6 856 aa21.54■■□□□ 1.04
PVT1-220ENST00000524165 AKAP2Q9Y2D5 859 aa21.54■■□□□ 1.04
PVT1-220ENST00000524165 A0A0G2JMZ2 1700 aa21.54■■□□□ 1.04
PVT1-220ENST00000524165 ABRAQ8N0Z2 381 aa21.53■■□□□ 1.04
PVT1-220ENST00000524165 AATFQ9NY61 560 aaKnown RBP eCLIP21.53■■□□□ 1.04
PVT1-220ENST00000524165 TBX21Q9UL17 535 aa21.53■■□□□ 1.04
PVT1-220ENST00000524165 PA2G4Q9UQ80 394 aaKnown RBP21.53■■□□□ 1.04
PVT1-220ENST00000524165 SALL2Q9Y467 1007 aaPredicted RBP21.53■■□□□ 1.04
PVT1-220ENST00000524165 TRANK1O15050 2925 aa21.53■■□□□ 1.04
PVT1-220ENST00000524165 MYH1P12882 1939 aa21.53■■□□□ 1.04
PVT1-220ENST00000524165 ROBO3Q96MS0 1386 aa21.52■■□□□ 1.04
PVT1-220ENST00000524165 GPR37L1O60883 481 aa21.52■■□□□ 1.04
PVT1-220ENST00000524165 HLA-DOAP06340 250 aa21.52■■□□□ 1.04
PVT1-220ENST00000524165 PPP4CP60510 307 aa21.52■■□□□ 1.04
PVT1-220ENST00000524165 TFF2Q03403 129 aa21.52■■□□□ 1.04
PVT1-220ENST00000524165 PI16Q6UXB8 463 aa21.52■■□□□ 1.04
PVT1-220ENST00000524165 MAML3Q96JK9 1138 aa21.52■■□□□ 1.04
PVT1-220ENST00000524165 TSEN34Q9BSV6 310 aaKnown RBP21.52■■□□□ 1.04
PVT1-220ENST00000524165 SPATC1LQ9H0A9 340 aa21.52■■□□□ 1.04
PVT1-220ENST00000524165 RPAP3Q9H6T3 665 aaPredicted RBP21.52■■□□□ 1.04
PVT1-220ENST00000524165 PGK1P00558 417 aa21.51■■□□□ 1.03
PVT1-220ENST00000524165 ERCC3P19447 782 aa21.51■■□□□ 1.03
PVT1-220ENST00000524165 KCNQ1P51787 676 aa21.51■■□□□ 1.03
PVT1-220ENST00000524165 TATDN1Q6P1N9 297 aa21.51■■□□□ 1.03
PVT1-220ENST00000524165 PSRC1Q6PGN9 363 aaPredicted RBP21.51■■□□□ 1.03
PVT1-220ENST00000524165 ALYREFQ86V81 257 aaKnown RBP21.51■■□□□ 1.03
PVT1-220ENST00000524165 SLC28A3Q9HAS3 691 aa21.51■■□□□ 1.03
PVT1-220ENST00000524165 HOXC10Q9NYD6 342 aa21.51■■□□□ 1.03
PVT1-220ENST00000524165 LRP2BPQ9P2M1 347 aa21.51■■□□□ 1.03
PVT1-220ENST00000524165 ERC2O15083 957 aa21.5■■□□□ 1.03
PVT1-220ENST00000524165 UBTFL1P0CB47 393 aaPredicted RBP21.5■■□□□ 1.03
PVT1-220ENST00000524165 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
PVT1-220ENST00000524165 NUP133Q8WUM0 1156 aa21.5■■□□□ 1.03
PVT1-220ENST00000524165 HERVK_113Q902F9 699 aa21.5■■□□□ 1.03
PVT1-220ENST00000524165 MROH8Q9H579 483 aa21.5■■□□□ 1.03
PVT1-220ENST00000524165 STARD7Q9NQZ5 370 aa21.5■■□□□ 1.03
PVT1-220ENST00000524165 ARID4AP29374 1257 aaPredicted RBP21.49■■□□□ 1.03
PVT1-220ENST00000524165 COG2Q14746 738 aa21.49■■□□□ 1.03
PVT1-220ENST00000524165 ZNF365Q70YC5 407 aa21.49■■□□□ 1.03
PVT1-220ENST00000524165 TMEM199Q8N511 208 aa21.49■■□□□ 1.03
PVT1-220ENST00000524165 NKX2-4Q9H2Z4 354 aa21.49■■□□□ 1.03
PVT1-220ENST00000524165 MROH7Q68CQ1 1323 aa21.49■■□□□ 1.03
PVT1-220ENST00000524165 CSF2RAP15509 400 aa21.48■■□□□ 1.03
PVT1-220ENST00000524165 ACLYP53396 1101 aa21.48■■□□□ 1.03
PVT1-220ENST00000524165 RAB3GAP1Q15042 981 aa21.48■■□□□ 1.03
PVT1-220ENST00000524165 NAA16Q6N069 864 aaPredicted RBP21.48■■□□□ 1.03
PVT1-220ENST00000524165 ACER1Q8TDN7 264 aa21.48■■□□□ 1.03
PVT1-220ENST00000524165 SNX27Q96L92 541 aa21.48■■□□□ 1.03
PVT1-220ENST00000524165 ZNF521Q96K83 1311 aa21.48■■□□□ 1.03
PVT1-220ENST00000524165 PRRC2BQ5JSZ5 2229 aaKnown RBP21.48■■□□□ 1.03
PVT1-220ENST00000524165 LRRC37A2A6NM11 1700 aa21.47■■□□□ 1.03
PVT1-220ENST00000524165 MOXD2PA6NHM9 499 aa21.47■■□□□ 1.03
PVT1-220ENST00000524165 ADAMTS4O75173 837 aa21.47■■□□□ 1.03
PVT1-220ENST00000524165 TFCP2Q12800 502 aa21.47■■□□□ 1.03
PVT1-220ENST00000524165 MB21D1Q8N884 522 aa21.47■■□□□ 1.03
PVT1-220ENST00000524165 C11orf16Q9NQ32 467 aa21.47■■□□□ 1.03
PVT1-220ENST00000524165 SAP30BPQ9UHR5 308 aaKnown RBP21.47■■□□□ 1.03
PVT1-220ENST00000524165 AKR1A1P14550 325 aa21.46■■□□□ 1.03
PVT1-220ENST00000524165 NEUROD6Q96NK8 337 aa21.46■■□□□ 1.03
PVT1-220ENST00000524165 MTIF3Q9H2K0 278 aaKnown RBP21.46■■□□□ 1.03
PVT1-220ENST00000524165 HDAC5Q9UQL6 1122 aa21.46■■□□□ 1.03
PVT1-220ENST00000524165 FCER1AP12319 257 aa21.45■■□□□ 1.02
PVT1-220ENST00000524165 MCAMP43121 646 aa21.45■■□□□ 1.02
PVT1-220ENST00000524165 ABCB5Q2M3G0 1257 aa21.45■■□□□ 1.02
PVT1-220ENST00000524165 GORABQ5T7V8 394 aa21.45■■□□□ 1.02
PVT1-220ENST00000524165 MICALL1Q8N3F8 863 aa21.45■■□□□ 1.02
PVT1-220ENST00000524165 EHD4Q9H223 541 aa21.45■■□□□ 1.02
PVT1-220ENST00000524165 YBX2Q9Y2T7 364 aaKnown RBP21.45■■□□□ 1.02
PVT1-220ENST00000524165 MYO5AQ9Y4I1 1855 aaKnown RBP21.44■■□□□ 1.02
PVT1-220ENST00000524165 ACRP10323 421 aa21.44■■□□□ 1.02
PVT1-220ENST00000524165 CDK7P50613 346 aa21.44■■□□□ 1.02
PVT1-220ENST00000524165 CERKLQ49MI3 558 aaPredicted RBP21.44■■□□□ 1.02
PVT1-220ENST00000524165 ADGRA1Q86SQ6 560 aa21.44■■□□□ 1.02
PVT1-220ENST00000524165 NCAPG2Q86XI2 1143 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms