RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 CEP120Q8N960 986 aa6.97□□□□□ -1.29
CTNNA1-239ENST00000523685 MASTLQ96GX5 879 aa6.97□□□□□ -1.29
CTNNA1-239ENST00000523685 PHACTR3Q96KR7 559 aa6.97□□□□□ -1.29
CTNNA1-239ENST00000523685 ZNF277Q9NRM2 450 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-239ENST00000523685 SLC6A14Q9UN76 642 aa6.97□□□□□ -1.29
CTNNA1-239ENST00000523685 USP16Q9Y5T5 823 aa6.97□□□□□ -1.29
CTNNA1-239ENST00000523685 TIAM2Q8IVF5 1701 aa6.96□□□□□ -1.29
CTNNA1-239ENST00000523685 NRXN2Q9P2S2 1712 aa6.96□□□□□ -1.29
CTNNA1-239ENST00000523685 ELOA3CA0A087WX78 387 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 UNCXA6NJT0 531 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 ELOA3DA6NLF2 546 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 GADD45BO75293 160 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 GHRHP01286 108 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 SLURP2P0DP57 97 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 ALAS2P22557 587 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 GNA15P30679 374 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 IRS1P35568 1242 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 ADH7P40394 386 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 DAB2P98082 770 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 ELOA3BQ3SY89 546 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 CCDC93Q567U6 631 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 LCE2CQ5TA81 110 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 SOGA3Q5TF21 947 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 KIAA0319Q5VV43 1072 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 OLFM4Q6UX06 510 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 TREML4Q6UXN2 200 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 SLCO4C1Q6ZQN7 724 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 MCM10Q7L590 875 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 TMC4Q7Z404 712 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 FAM35AQ86V20 835 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 NGEFQ8N5V2 710 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 ELOA3Q8NG57 546 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 RTF1Q92541 710 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 ACDQ96AP0 544 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 CFAP53Q96M91 514 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 MDFIQ99750 246 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 RBSNQ9H1K0 784 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 RNF19AQ9NV58 838 aa6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 NIP7Q9Y221 180 aaKnown RBP eCLIP6.96□□□□□ -1.3
CTNNA1-239ENST00000523685 A0A1W2PP55 124 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 IQCA1LA6NCM1 817 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 GIPC1O14908 333 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 SNRPA1P09661 255 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 U2AF1L5P0DN76 240 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 CPB1P15086 417 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 NPR1P16066 1061 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 U2AF1Q01081 240 aaKnown RBP eCLIP6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 PSMD2Q13200 908 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 DCTN1Q14203 1278 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 PEAR1Q5VY43 1037 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 PI16Q6UXB8 463 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 OSMRQ99650 979 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 TAF1DQ9H5J8 278 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 LATS2Q9NRM7 1088 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 ZNF652Q9Y2D9 606 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 COL3A1P02461 1466 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 ZNF541Q9H0D2 1346 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 LTBP3Q9NS15 1303 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 DLEC1Q9Y238 1755 aa6.95□□□□□ -1.3
CTNNA1-239ENST00000523685 PCNTO95613 3336 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 COL11A2P13942 1736 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 E9PSI1 815 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 FOXN1O15353 648 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 EPXP11678 715 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 EIF2AK2P19525 551 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 TPTE2Q6XPS3 522 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 LDHDQ86WU2 507 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 GALNT6Q8NCL4 622 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 EDARADDQ8WWZ3 215 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 MRRFQ96E11 262 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 FAM161BQ96MY7 647 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 EHD4Q9H223 541 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 SUV39H2Q9H5I1 410 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 MRS2Q9HD23 443 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 DZANK1Q9NVP4 752 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 PPP4R2Q9NY27 417 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 MIS18AQ9NYP9 233 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 HACL1Q9UJ83 578 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 NUDCQ9Y266 331 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 AK5Q9Y6K8 562 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 UBR2Q8IWV8 1755 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 RNF123Q5XPI4 1314 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 CCDC88AQ3V6T2 1871 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 ANKRD31Q8N7Z5 1873 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 CEMIPQ8WUJ3 1361 aa6.94□□□□□ -1.3
CTNNA1-239ENST00000523685 SCN7AQ01118 1682 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 SLX4Q8IY92 1834 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 TCERG1O14776 1098 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 SORBS3O60504 671 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 ACPPP15309 386 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 EPHX2P34913 555 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 HLFQ16534 295 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 PERM1Q5SV97 790 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 MAP1SQ66K74 1059 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 ELMSAN1Q6PJG2 1045 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 CLEC4GQ6UXB4 293 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 C1orf229Q6ZS94 237 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 RTKN2Q8IZC4 609 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 SYNE4Q8N205 404 aa6.93□□□□□ -1.3
CTNNA1-239ENST00000523685 MICALL1Q8N3F8 863 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms