RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 OSBP2Q969R2 916 aa31.09■■■□□ 2.57
LAPTM4B-203ENST00000521545 YTHDC1Q96MU7 727 aaKnown RBP31.09■■■□□ 2.57
LAPTM4B-203ENST00000521545 PLXNB2O15031 1838 aa31.08■■■□□ 2.57
LAPTM4B-203ENST00000521545 SMIM22K7EJ46 135 aa31.08■■■□□ 2.57
LAPTM4B-203ENST00000521545 ZKSCAN1P17029 563 aaPredicted RBP31.08■■■□□ 2.57
LAPTM4B-203ENST00000521545 TRIM32Q13049 653 aa31.08■■■□□ 2.57
LAPTM4B-203ENST00000521545 USP6NLQ92738 828 aa31.08■■■□□ 2.57
LAPTM4B-203ENST00000521545 CRBNQ96SW2 442 aa31.08■■■□□ 2.57
LAPTM4B-203ENST00000521545 CRISPLD2Q9H0B8 497 aa31.08■■■□□ 2.57
LAPTM4B-203ENST00000521545 TMX2Q9Y320 296 aa31.08■■■□□ 2.57
LAPTM4B-203ENST00000521545 BTBD7Q9P203 1132 aa31.07■■■□□ 2.56
LAPTM4B-203ENST00000521545 IVNS1ABPQ9Y6Y0 642 aa31.07■■■□□ 2.56
LAPTM4B-203ENST00000521545 GSG1L2A8MUP6 293 aa31.06■■■□□ 2.56
LAPTM4B-203ENST00000521545 GNAT2P19087 354 aa31.06■■■□□ 2.56
LAPTM4B-203ENST00000521545 ATP2B2Q01814 1243 aa31.06■■■□□ 2.56
LAPTM4B-203ENST00000521545 SBK1Q52WX2 424 aa31.06■■■□□ 2.56
LAPTM4B-203ENST00000521545 CLEC10AQ8IUN9 316 aa31.06■■■□□ 2.56
LAPTM4B-203ENST00000521545 SIAH1Q8IUQ4 282 aa31.06■■■□□ 2.56
LAPTM4B-203ENST00000521545 KANSL2Q9H9L4 492 aa31.06■■■□□ 2.56
LAPTM4B-203ENST00000521545 H0YGN5 161 aa31.05■■■□□ 2.56
LAPTM4B-203ENST00000521545 MAP2K5Q13163 448 aa31.05■■■□□ 2.56
LAPTM4B-203ENST00000521545 APBA2Q99767 749 aa31.05■■■□□ 2.56
LAPTM4B-203ENST00000521545 VCPKMTQ9H867 229 aa31.05■■■□□ 2.56
LAPTM4B-203ENST00000521545 SLC15A5A6NIM6 579 aa31.04■■■□□ 2.56
LAPTM4B-203ENST00000521545 MINDY4BA8MYZ0 360 aa31.04■■■□□ 2.56
LAPTM4B-203ENST00000521545 GPAA1O43292 621 aa31.04■■■□□ 2.56
LAPTM4B-203ENST00000521545 APPP05067 770 aa31.04■■■□□ 2.56
LAPTM4B-203ENST00000521545 PRKAR2AP13861 404 aaKnown RBP31.04■■■□□ 2.56
LAPTM4B-203ENST00000521545 SPICE1Q8N0Z3 855 aa31.04■■■□□ 2.56
LAPTM4B-203ENST00000521545 MKNK2Q9HBH9 465 aa31.04■■■□□ 2.56
LAPTM4B-203ENST00000521545 EEF2P13639 858 aaKnown RBP31.03■■■□□ 2.56
LAPTM4B-203ENST00000521545 MX1P20591 662 aa31.03■■■□□ 2.56
LAPTM4B-203ENST00000521545 PTPREP23469 700 aa31.03■■■□□ 2.56
LAPTM4B-203ENST00000521545 HABP4Q5JVS0 413 aaKnown RBP31.03■■■□□ 2.56
LAPTM4B-203ENST00000521545 KIAA1755Q5JYT7 1200 aa31.03■■■□□ 2.56
LAPTM4B-203ENST00000521545 PI4K2BQ8TCG2 481 aa31.03■■■□□ 2.56
LAPTM4B-203ENST00000521545 OTUD7AQ8TE49 926 aaPredicted RBP31.03■■■□□ 2.56
LAPTM4B-203ENST00000521545 FSD1Q9BTV5 496 aa31.03■■■□□ 2.56
LAPTM4B-203ENST00000521545 FLOT1O75955 427 aa31.02■■■□□ 2.56
LAPTM4B-203ENST00000521545 TDO2P48775 406 aa31.02■■■□□ 2.56
LAPTM4B-203ENST00000521545 MAP3K21Q5TCX8 1036 aa31.02■■■□□ 2.56
LAPTM4B-203ENST00000521545 ANKRD45Q5TZF3 282 aa31.02■■■□□ 2.56
LAPTM4B-203ENST00000521545 MB21D1Q8N884 522 aa31.02■■■□□ 2.56
LAPTM4B-203ENST00000521545 ANKLE1Q8NAG6 615 aa31.02■■■□□ 2.56
LAPTM4B-203ENST00000521545 NR2E3Q9Y5X4 410 aa31.02■■■□□ 2.56
LAPTM4B-203ENST00000521545 WDR46O15213 610 aaKnown RBP31.01■■■□□ 2.55
LAPTM4B-203ENST00000521545 DSG3P32926 999 aa31.01■■■□□ 2.55
LAPTM4B-203ENST00000521545 CCL14Q16627 93 aa31.01■■■□□ 2.55
LAPTM4B-203ENST00000521545 NECAB2Q7Z6G3 386 aa31.01■■■□□ 2.55
LAPTM4B-203ENST00000521545 STK11IPQ8N1F8 1099 aa31.01■■■□□ 2.55
LAPTM4B-203ENST00000521545 PAWRQ96IZ0 340 aaKnown RBP31.01■■■□□ 2.55
LAPTM4B-203ENST00000521545 M0R2C6 588 aa31■■■□□ 2.55
LAPTM4B-203ENST00000521545 CACNB2Q08289 660 aaPredicted RBP31■■■□□ 2.55
LAPTM4B-203ENST00000521545 ZNF287Q9HBT7 754 aa31■■■□□ 2.55
LAPTM4B-203ENST00000521545 GOPCQ9HD26 462 aa31■■■□□ 2.55
LAPTM4B-203ENST00000521545 PATL2C9JE40 543 aaKnown RBP30.99■■■□□ 2.55
LAPTM4B-203ENST00000521545 SAMD1Q6SPF0 538 aaPredicted RBP30.99■■■□□ 2.55
LAPTM4B-203ENST00000521545 MOV10L1Q9BXT6 1211 aaKnown RBP30.99■■■□□ 2.55
LAPTM4B-203ENST00000521545 NACAP1Q9BZK3 213 aa30.99■■■□□ 2.55
LAPTM4B-203ENST00000521545 SPATC1LQ9H0A9 340 aa30.99■■■□□ 2.55
LAPTM4B-203ENST00000521545 RAD21O60216 631 aa30.98■■■□□ 2.55
LAPTM4B-203ENST00000521545 PLS1Q14651 629 aa30.98■■■□□ 2.55
LAPTM4B-203ENST00000521545 MFSD14CQ5VZR4 134 aa30.98■■■□□ 2.55
LAPTM4B-203ENST00000521545 STRNO43815 780 aa30.97■■■□□ 2.55
LAPTM4B-203ENST00000521545 RASA1P20936 1047 aa30.97■■■□□ 2.55
LAPTM4B-203ENST00000521545 HDAC1Q13547 482 aaPredicted RBP30.97■■■□□ 2.55
LAPTM4B-203ENST00000521545 GRB14Q14449 540 aa30.97■■■□□ 2.55
LAPTM4B-203ENST00000521545 SHCBP1Q8NEM2 672 aa30.97■■■□□ 2.55
LAPTM4B-203ENST00000521545 COLQQ9Y215 455 aaPredicted RBP30.97■■■□□ 2.55
LAPTM4B-203ENST00000521545 EVI5O60447 810 aa30.96■■■□□ 2.55
LAPTM4B-203ENST00000521545 AAMPQ13685 434 aa30.96■■■□□ 2.55
LAPTM4B-203ENST00000521545 DPP9Q86TI2 863 aa30.96■■■□□ 2.55
LAPTM4B-203ENST00000521545 IFNL3Q8IZI9 196 aa30.96■■■□□ 2.55
LAPTM4B-203ENST00000521545 ZNF444Q8N0Y2 327 aaPredicted RBP30.96■■■□□ 2.55
LAPTM4B-203ENST00000521545 ATG4CQ96DT6 458 aa30.96■■■□□ 2.55
LAPTM4B-203ENST00000521545 EPB41L4AQ9HCS5 686 aaPredicted RBP30.96■■■□□ 2.55
LAPTM4B-203ENST00000521545 OGDHLQ9ULD0 1010 aa30.96■■■□□ 2.55
LAPTM4B-203ENST00000521545 ROBO3Q96MS0 1386 aa30.95■■■□□ 2.55
LAPTM4B-203ENST00000521545 CEP290O15078 2479 aa30.95■■■□□ 2.55
LAPTM4B-203ENST00000521545 HOXC6P09630 235 aa30.95■■■□□ 2.55
LAPTM4B-203ENST00000521545 ZMYM1Q5SVZ6 1142 aa30.95■■■□□ 2.55
LAPTM4B-203ENST00000521545 DIS3LQ8TF46 1054 aaKnown RBP30.95■■■□□ 2.55
LAPTM4B-203ENST00000521545 SEC62Q99442 399 aaKnown RBP30.95■■■□□ 2.55
LAPTM4B-203ENST00000521545 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.95■■■□□ 2.55
LAPTM4B-203ENST00000521545 NBPF3Q9H094 633 aa30.95■■■□□ 2.55
LAPTM4B-203ENST00000521545 ERCC3P19447 782 aa30.94■■■□□ 2.54
LAPTM4B-203ENST00000521545 MROH8Q9H579 483 aa30.94■■■□□ 2.54
LAPTM4B-203ENST00000521545 CCND3P30281 292 aaPredicted RBP30.93■■■□□ 2.54
LAPTM4B-203ENST00000521545 NCAPG2Q86XI2 1143 aa30.93■■■□□ 2.54
LAPTM4B-203ENST00000521545 FLRT1Q9NZU1 646 aa30.93■■■□□ 2.54
LAPTM4B-203ENST00000521545 NYAP2Q9P242 653 aa30.93■■■□□ 2.54
LAPTM4B-203ENST00000521545 SALL3Q9BXA9 1300 aa30.93■■■□□ 2.54
LAPTM4B-203ENST00000521545 RLFQ13129 1914 aa30.92■■■□□ 2.54
LAPTM4B-203ENST00000521545 SLC3A2P08195 630 aaKnown RBP30.92■■■□□ 2.54
LAPTM4B-203ENST00000521545 ADORA2AP29274 412 aa30.92■■■□□ 2.54
LAPTM4B-203ENST00000521545 NPLOC4Q8TAT6 608 aa30.92■■■□□ 2.54
LAPTM4B-203ENST00000521545 NAPBQ9H115 298 aa30.92■■■□□ 2.54
LAPTM4B-203ENST00000521545 SLC5A4Q9NY91 659 aa30.92■■■□□ 2.54
LAPTM4B-203ENST00000521545 FAM83BQ5T0W9 1011 aa30.91■■■□□ 2.54
LAPTM4B-203ENST00000521545 CHRDL2Q6WN34 429 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms