RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 ARID5BQ14865 1188 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 MAP9Q49MG5 647 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 GRAMD1CQ8IYS0 662 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 TRIML1Q8N9V2 468 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 JDP2Q8WYK2 163 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 GOLGA1Q92805 767 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 CARD6Q9BX69 1037 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 PCDHB6Q9Y5E3 794 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 EVCP57679 992 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 PTPN21Q16825 1174 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 CNKSR1Q969H4 720 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 LY9Q9HBG7 655 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 ZNF215Q9UL58 517 aaPredicted RBP12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 SEMA3EO15041 775 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 MFSD14BQ5SR56 506 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 ALS2CR12Q96Q35 445 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 BSDC1Q9NW68 430 aaPredicted RBP12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 CALCOCO1Q9P1Z2 691 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 IGSF3O75054 1194 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 CTDNEP1O95476 244 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 GOLGA8HP0CJ92 632 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 TBC1D8BQ0IIM8 1120 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 SV2BQ7L1I2 683 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 CSGALNACT2Q8N6G5 542 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 STAG1Q8WVM7 1258 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 NELFBQ8WX92 580 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 CCDC42Q96M95 316 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 SRP68Q9UHB9 627 aaKnown RBP12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 GSG1L2A8MUP6 293 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 ATP1A3P13637 1013 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 KRT83P78385 493 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 TXNRD1Q16881 649 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 KRT25Q7Z3Z0 450 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 CERS3Q8IU89 383 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 CEP112Q8N8E3 955 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 DRC1Q96MC2 740 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 NALCNQ8IZF0 1738 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 KIF28PB7ZC32 967 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 KRT9P35527 623 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 ALX1Q15699 326 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 INF2Q27J81 1249 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 SARM1Q6SZW1 724 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 OGFRQ9NZT2 677 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 SLIT3O75094 1523 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 COL15A1P39059 1388 aa12.67□□□□□ -0.38
PCDHGB4-201ENST00000519479 H0YHG0 523 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 KRT86O43790 486 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 MCM3P25205 808 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 MCM6Q14566 821 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 OGFOD1Q8N543 542 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 ERMNQ8TAM6 284 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 LZTS2Q9BRK4 669 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 MATR3P43243 847 aaKnown RBP eCLIP12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 ETF1P62495 437 aaKnown RBP12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 VPS36Q86VN1 386 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 KLRF2D3W0D1 207 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 SERPINB2P05120 415 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 MRPL12P52815 198 aaKnown RBP12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 MECOMQ03112 1051 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 PPP2R3AQ06190 1150 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 KIF5AQ12840 1032 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 ZFYVE27Q5T4F4 411 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 TRMT1LQ7Z2T5 733 aaKnown RBP12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 PLA2G4DQ86XP0 818 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 DESI2Q9BSY9 194 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 CASP7P55210 303 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 GOLGA8FQ08AF8 430 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 GOLGA8DPQ0D2H9 430 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 GTPBP4Q9BZE4 634 aaKnown RBP12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 PRM3Q9NNZ6 103 aa12.66□□□□□ -0.38
PCDHGB4-201ENST00000519479 SMCO2A6NFE2 343 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 KCNQ2O43526 872 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 CDR1P51861 262 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 ANTXR2P58335 489 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 GTF2IP78347 998 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 NOC4LQ9BVI4 516 aaKnown RBP12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 TSPYL1Q9H0U9 437 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 UBN2Q6ZU65 1347 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 TBCAO75347 108 aaKnown RBP12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 FDPSP14324 419 aaKnown RBP12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 ST3GAL1Q11201 340 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 SPATA1Q5VX52 437 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 REXO1Q8N1G1 1221 aaKnown RBP12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 CENPHQ9H3R5 247 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 LRWD1Q9UFC0 647 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 MAN1B1Q9UKM7 699 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 MINPP1Q9UNW1 487 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 TRIM14Q14142 442 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 CCDC144BQ3MJ40 725 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 DPP8Q6V1X1 898 aaPredicted RBP12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 CABP7Q86V35 215 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 SGMS1Q86VZ5 419 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 TBC1D22AQ8WUA7 517 aa12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 SRPRBQ9Y5M8 271 aaKnown RBP12.65□□□□□ -0.38
PCDHGB4-201ENST00000519479 PLEKHA8P1O95397 391 aa12.64□□□□□ -0.39
PCDHGB4-201ENST00000519479 TNIP1Q15025 636 aa12.64□□□□□ -0.39
PCDHGB4-201ENST00000519479 CCDC122Q5T0U0 273 aa12.64□□□□□ -0.39
PCDHGB4-201ENST00000519479 RESP18Q5W5W9 173 aa12.64□□□□□ -0.39
PCDHGB4-201ENST00000519479 CYP26C1Q6V0L0 522 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms