RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 RNF34Q969K3 372 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 Q96M66 194 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 KREMEN1Q96MU8 473 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 ALPK1Q96QP1 1244 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 EHMT1Q9H9B1 1298 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 PRDM7Q9NQW5 492 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 WRNQ14191 1432 aaPredicted RBP eCLIP5.67□□□□□ -1.5
CAST-242ENST00000515063 ATAD2BQ9ULI0 1458 aa5.67□□□□□ -1.5
CAST-242ENST00000515063 SCAMP3O14828 347 aaKnown RBP5.67□□□□□ -1.5
CAST-242ENST00000515063 IMPDH2P12268 514 aa5.67□□□□□ -1.5
CAST-242ENST00000515063 TPP2P29144 1249 aaPredicted RBP5.67□□□□□ -1.5
CAST-242ENST00000515063 FANCCQ00597 558 aa5.67□□□□□ -1.5
CAST-242ENST00000515063 ARSHQ5FYA8 562 aa5.67□□□□□ -1.5
CAST-242ENST00000515063 ZSWIM9Q86XI8 627 aa5.67□□□□□ -1.5
CAST-242ENST00000515063 BAHD1Q8TBE0 780 aaPredicted RBP5.67□□□□□ -1.5
CAST-242ENST00000515063 TMEM40Q8WWA1 233 aa5.67□□□□□ -1.5
CAST-242ENST00000515063 FAM53CQ9NYF3 392 aa5.67□□□□□ -1.5
CAST-242ENST00000515063 UBP1Q9NZI7 540 aa5.67□□□□□ -1.5
CAST-242ENST00000515063 DUSP13Q9UII6 198 aa5.67□□□□□ -1.5
CAST-242ENST00000515063 CTNND2Q9UQB3 1225 aa5.67□□□□□ -1.5
CAST-242ENST00000515063 SLC22A31A6NKX4 558 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 LTKP29376 864 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 GDNFP39905 211 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 CRKP46108 304 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 KCNMB1Q16558 191 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 CLEC16AQ2KHT3 1053 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 CDCP2Q5VXM1 449 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 OVOS1Q6IE37 1185 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 GK5Q6ZS86 529 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 NLRC3Q7RTR2 1065 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 TSPYL5Q86VY4 417 aaPredicted RBP5.66□□□□□ -1.5
CAST-242ENST00000515063 CREG2Q8IUH2 290 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 SLITRK4Q8IW52 837 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 ENOX1Q8TC92 643 aaKnown RBP5.66□□□□□ -1.5
CAST-242ENST00000515063 KIF2CQ99661 725 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 GOLGA2P5Q9HBQ8 144 aa5.66□□□□□ -1.5
CAST-242ENST00000515063 ABCC8Q09428 1581 aa5.65□□□□□ -1.5
CAST-242ENST00000515063 DNAJA2O60884 412 aa5.65□□□□□ -1.5
CAST-242ENST00000515063 SRFP11831 508 aa5.65□□□□□ -1.5
CAST-242ENST00000515063 DHX38Q92620 1227 aaKnown RBP5.65□□□□□ -1.5
CAST-242ENST00000515063 SPATA32Q96LK8 384 aa5.65□□□□□ -1.5
CAST-242ENST00000515063 DUSP15Q9H1R2 295 aaPredicted RBP5.65□□□□□ -1.5
CAST-242ENST00000515063 CNNM2Q9H8M5 875 aa5.65□□□□□ -1.5
CAST-242ENST00000515063 SLAMF8Q9P0V8 285 aa5.65□□□□□ -1.5
CAST-242ENST00000515063 TNIKQ9UKE5 1360 aa5.65□□□□□ -1.51
CAST-242ENST00000515063 MEIS3P2A8K0S8 358 aa5.64□□□□□ -1.51
CAST-242ENST00000515063 ESR1P03372 595 aa5.64□□□□□ -1.51
CAST-242ENST00000515063 YBX3P16989 372 aaKnown RBP eCLIP5.64□□□□□ -1.51
CAST-242ENST00000515063 GAB4Q2WGN9 574 aa5.64□□□□□ -1.51
CAST-242ENST00000515063 LDLRAD1Q5T700 205 aa5.64□□□□□ -1.51
CAST-242ENST00000515063 OGFOD2Q6N063 350 aa5.64□□□□□ -1.51
CAST-242ENST00000515063 POU5F2Q8N7G0 328 aa5.64□□□□□ -1.51
CAST-242ENST00000515063 KIRREL1Q96J84 757 aa5.64□□□□□ -1.51
CAST-242ENST00000515063 TMEM59LQ9UK28 342 aa5.64□□□□□ -1.51
CAST-242ENST00000515063 BAZ1BQ9UIG0 1483 aaKnown RBP5.64□□□□□ -1.51
CAST-242ENST00000515063 HMGXB3Q12766 1538 aa5.64□□□□□ -1.51
CAST-242ENST00000515063 CLEC3AO75596 197 aa5.63□□□□□ -1.51
CAST-242ENST00000515063 RECKO95980 971 aa5.63□□□□□ -1.51
CAST-242ENST00000515063 CLCQ05315 142 aa5.63□□□□□ -1.51
CAST-242ENST00000515063 EGR3Q06889 387 aa5.63□□□□□ -1.51
CAST-242ENST00000515063 COL9A2Q14055 689 aaPredicted RBP5.63□□□□□ -1.51
CAST-242ENST00000515063 TMEM67Q5HYA8 995 aa5.63□□□□□ -1.51
CAST-242ENST00000515063 TTC6Q86TZ1 520 aa5.63□□□□□ -1.51
CAST-242ENST00000515063 ZNF654Q8IZM8 581 aa5.63□□□□□ -1.51
CAST-242ENST00000515063 FAM9AQ8IZU1 332 aaPredicted RBP5.63□□□□□ -1.51
CAST-242ENST00000515063 ATG4CQ96DT6 458 aa5.63□□□□□ -1.51
CAST-242ENST00000515063 EAF1Q96JC9 268 aaPredicted RBP5.63□□□□□ -1.51
CAST-242ENST00000515063 DHRS1Q96LJ7 313 aa5.63□□□□□ -1.51
CAST-242ENST00000515063 FERD3LQ96RJ6 166 aa5.63□□□□□ -1.51
CAST-242ENST00000515063 KIF21BO75037 1637 aa5.63□□□□□ -1.51
CAST-242ENST00000515063 TNFRSF10CO14798 259 aa5.62□□□□□ -1.51
CAST-242ENST00000515063 FARP2O94887 1054 aaPredicted RBP5.62□□□□□ -1.51
CAST-242ENST00000515063 UBOX5O94941 541 aa5.62□□□□□ -1.51
CAST-242ENST00000515063 GLI1P08151 1106 aa5.62□□□□□ -1.51
CAST-242ENST00000515063 NME1P15531 152 aaKnown RBP5.62□□□□□ -1.51
CAST-242ENST00000515063 DUSP4Q13115 394 aa5.62□□□□□ -1.51
CAST-242ENST00000515063 NMIQ13287 307 aaPredicted RBP5.62□□□□□ -1.51
CAST-242ENST00000515063 ZNF394Q53GI3 561 aa5.62□□□□□ -1.51
CAST-242ENST00000515063 OXR1Q8N573 874 aa5.62□□□□□ -1.51
CAST-242ENST00000515063 SYTL5Q8TDW5 730 aaPredicted RBP5.62□□□□□ -1.51
CAST-242ENST00000515063 MRRFQ96E11 262 aaKnown RBP5.62□□□□□ -1.51
CAST-242ENST00000515063 SLC38A3Q99624 504 aa5.62□□□□□ -1.51
CAST-242ENST00000515063 DDX41Q9UJV9 622 aaKnown RBP5.62□□□□□ -1.51
CAST-242ENST00000515063 ZNRF3Q9ULT6 936 aa5.62□□□□□ -1.51
CAST-242ENST00000515063 PCDHGB7Q9Y5F8 929 aa5.62□□□□□ -1.51
CAST-242ENST00000515063 CARMIL2Q6F5E8 1435 aa5.62□□□□□ -1.51
CAST-242ENST00000515063 LRRN2O75325 713 aa5.61□□□□□ -1.51
CAST-242ENST00000515063 ENDOUP21128 410 aaKnown RBP5.61□□□□□ -1.51
CAST-242ENST00000515063 NCAPD3P42695 1498 aa5.61□□□□□ -1.51
CAST-242ENST00000515063 CHRNEQ04844 493 aa5.61□□□□□ -1.51
CAST-242ENST00000515063 GOLGA3Q08378 1498 aa5.61□□□□□ -1.51
CAST-242ENST00000515063 PKN1Q16512 942 aa5.61□□□□□ -1.51
CAST-242ENST00000515063 NBPF12Q5TAG4 269 aaPredicted RBP5.61□□□□□ -1.51
CAST-242ENST00000515063 MPZL3Q6UWV2 235 aa5.61□□□□□ -1.51
CAST-242ENST00000515063 DAGLBQ8NCG7 672 aa5.61□□□□□ -1.51
CAST-242ENST00000515063 PDZD8Q8NEN9 1154 aa5.61□□□□□ -1.51
CAST-242ENST00000515063 VWCEQ96DN2 955 aa5.61□□□□□ -1.51
CAST-242ENST00000515063 TM9SF2Q99805 663 aa5.61□□□□□ -1.51
CAST-242ENST00000515063 KRTAP9-2Q9BYQ4 174 aa5.61□□□□□ -1.51
CAST-242ENST00000515063 PCDHA11Q9Y5I1 949 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms