RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 NECAB2Q7Z6G3 386 aa16.02■□□□□ 0.16
PFDN1-206ENST00000514611 SIAH1Q8IUQ4 282 aa16.02■□□□□ 0.16
PFDN1-206ENST00000514611 AMOTL1Q8IY63 956 aa16.02■□□□□ 0.16
PFDN1-206ENST00000514611 SPICE1Q8N0Z3 855 aa16.02■□□□□ 0.16
PFDN1-206ENST00000514611 ANKLE1Q8NAG6 615 aa16.02■□□□□ 0.16
PFDN1-206ENST00000514611 FLRT1Q9NZU1 646 aa16.02■□□□□ 0.16
PFDN1-206ENST00000514611 A0A0G2JMZ2 1700 aa16.02■□□□□ 0.15
PFDN1-206ENST00000514611 MYH7P12883 1935 aa16.02■□□□□ 0.15
PFDN1-206ENST00000514611 EVI5O60447 810 aa16.01■□□□□ 0.15
PFDN1-206ENST00000514611 CAPN2P17655 700 aa16.01■□□□□ 0.15
PFDN1-206ENST00000514611 PTPREP23469 700 aa16.01■□□□□ 0.15
PFDN1-206ENST00000514611 GRB14Q14449 540 aa16.01■□□□□ 0.15
PFDN1-206ENST00000514611 TRMT44Q8IYL2 757 aaKnown RBP16.01■□□□□ 0.15
PFDN1-206ENST00000514611 KBTBD3Q8NAB2 608 aa16.01■□□□□ 0.15
PFDN1-206ENST00000514611 ARHGEF10LQ9HCE6 1279 aa16.01■□□□□ 0.15
PFDN1-206ENST00000514611 OGDHLQ9ULD0 1010 aa16.01■□□□□ 0.15
PFDN1-206ENST00000514611 PCDHB15Q9Y5E8 787 aa16.01■□□□□ 0.15
PFDN1-206ENST00000514611 NR2E3Q9Y5X4 410 aa16.01■□□□□ 0.15
PFDN1-206ENST00000514611 COG2Q14746 738 aa16■□□□□ 0.15
PFDN1-206ENST00000514611 OSBP2Q969R2 916 aa16■□□□□ 0.15
PFDN1-206ENST00000514611 DDRGK1Q96HY6 314 aa16■□□□□ 0.15
PFDN1-206ENST00000514611 GPATCH3Q96I76 525 aa16■□□□□ 0.15
PFDN1-206ENST00000514611 MOV10L1Q9BXT6 1211 aaKnown RBP16■□□□□ 0.15
PFDN1-206ENST00000514611 PRO3102Q9H379 93 aa16■□□□□ 0.15
PFDN1-206ENST00000514611 VCPKMTQ9H867 229 aa16■□□□□ 0.15
PFDN1-206ENST00000514611 PCDH10Q9P2E7 1040 aa16■□□□□ 0.15
PFDN1-206ENST00000514611 ARPP21Q9UBL0 812 aaPredicted RBP16■□□□□ 0.15
PFDN1-206ENST00000514611 TMX2Q9Y320 296 aa16■□□□□ 0.15
PFDN1-206ENST00000514611 LAMA3Q16787 3333 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 SLC15A5A6NIM6 579 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 FLOT1O75955 427 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 GLRX3O76003 335 aaKnown RBP15.99■□□□□ 0.15
PFDN1-206ENST00000514611 ATP2B2Q01814 1243 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
PFDN1-206ENST00000514611 C7orf61Q8IZ16 206 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 STK11IPQ8N1F8 1099 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 NPLOC4Q8TAT6 608 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 OTUD7AQ8TE49 926 aaPredicted RBP15.99■□□□□ 0.15
PFDN1-206ENST00000514611 APPBP2Q92624 585 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 LPAR1Q92633 364 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 ATG4CQ96DT6 458 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 CCDC17Q96LX7 622 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 STRBPQ96SI9 672 aaKnown RBP15.99■□□□□ 0.15
PFDN1-206ENST00000514611 NBPF3Q9H094 633 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 SPATC1LQ9H0A9 340 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 C11orf49Q9H6J7 331 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 EPB41L4AQ9HCS5 686 aaPredicted RBP15.99■□□□□ 0.15
PFDN1-206ENST00000514611 IVNS1ABPQ9Y6Y0 642 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 ALPK3Q96L96 1907 aa15.99■□□□□ 0.15
PFDN1-206ENST00000514611 PFASO15067 1338 aa15.98■□□□□ 0.15
PFDN1-206ENST00000514611 MYH8P13535 1937 aa15.98■□□□□ 0.15
PFDN1-206ENST00000514611 M0R2C6 588 aa15.98■□□□□ 0.15
PFDN1-206ENST00000514611 EEF2P13639 858 aaKnown RBP15.98■□□□□ 0.15
PFDN1-206ENST00000514611 DSG3P32926 999 aa15.98■□□□□ 0.15
PFDN1-206ENST00000514611 RRP1P56182 461 aaKnown RBP15.98■□□□□ 0.15
PFDN1-206ENST00000514611 LHX8Q68G74 356 aa15.98■□□□□ 0.15
PFDN1-206ENST00000514611 SH2D4AQ9H788 454 aa15.98■□□□□ 0.15
PFDN1-206ENST00000514611 RLFQ13129 1914 aa15.98■□□□□ 0.15
PFDN1-206ENST00000514611 GSG1L2A8MUP6 293 aa15.97■□□□□ 0.15
PFDN1-206ENST00000514611 WDR46O15213 610 aaKnown RBP15.97■□□□□ 0.15
PFDN1-206ENST00000514611 GPAA1O43292 621 aa15.97■□□□□ 0.15
PFDN1-206ENST00000514611 HOXC6P09630 235 aa15.97■□□□□ 0.15
PFDN1-206ENST00000514611 ERCC3P19447 782 aa15.97■□□□□ 0.15
PFDN1-206ENST00000514611 ADORA2AP29274 412 aa15.97■□□□□ 0.15
PFDN1-206ENST00000514611 PI4K2BQ8TCG2 481 aa15.97■□□□□ 0.15
PFDN1-206ENST00000514611 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.97■□□□□ 0.15
PFDN1-206ENST00000514611 FBXO28Q9NVF7 368 aa15.97■□□□□ 0.15
PFDN1-206ENST00000514611 HOXC10Q9NYD6 342 aa15.97■□□□□ 0.15
PFDN1-206ENST00000514611 ROBO3Q96MS0 1386 aa15.97■□□□□ 0.15
PFDN1-206ENST00000514611 ZNF236Q9UL36 1845 aa15.96■□□□□ 0.15
PFDN1-206ENST00000514611 RNF113AO15541 343 aaKnown RBP15.96■□□□□ 0.15
PFDN1-206ENST00000514611 CYP2C19P33261 490 aa15.96■□□□□ 0.15
PFDN1-206ENST00000514611 PLS1Q14651 629 aa15.96■□□□□ 0.15
PFDN1-206ENST00000514611 MFSD14CQ5VZR4 134 aa15.96■□□□□ 0.15
PFDN1-206ENST00000514611 KANSL2Q9H9L4 492 aa15.96■□□□□ 0.15
PFDN1-206ENST00000514611 ZMYND8Q9ULU4 1186 aaPredicted RBP15.96■□□□□ 0.15
PFDN1-206ENST00000514611 MINDY4BA8MYZ0 360 aa15.95■□□□□ 0.14
PFDN1-206ENST00000514611 RAD21O60216 631 aa15.95■□□□□ 0.14
PFDN1-206ENST00000514611 RASA1P20936 1047 aa15.95■□□□□ 0.14
PFDN1-206ENST00000514611 TMEM132BQ14DG7 1078 aa15.95■□□□□ 0.14
PFDN1-206ENST00000514611 SBK1Q52WX2 424 aa15.95■□□□□ 0.14
PFDN1-206ENST00000514611 DPP9Q86TI2 863 aa15.95■□□□□ 0.14
PFDN1-206ENST00000514611 NCAPG2Q86XI2 1143 aa15.95■□□□□ 0.14
PFDN1-206ENST00000514611 MB21D1Q8N884 522 aa15.95■□□□□ 0.14
PFDN1-206ENST00000514611 SHCBP1Q8NEM2 672 aa15.95■□□□□ 0.14
PFDN1-206ENST00000514611 TRPV1Q8NER1 839 aa15.95■□□□□ 0.14
PFDN1-206ENST00000514611 SEC62Q99442 399 aaKnown RBP15.95■□□□□ 0.14
PFDN1-206ENST00000514611 STAP2Q9UGK3 403 aa15.95■□□□□ 0.14
PFDN1-206ENST00000514611 TTC41PQ6P2S7 1318 aa15.94■□□□□ 0.14
PFDN1-206ENST00000514611 GREB1LQ9C091 1923 aaPredicted RBP15.94■□□□□ 0.14
PFDN1-206ENST00000514611 COBLO75128 1261 aa15.94■□□□□ 0.14
PFDN1-206ENST00000514611 IGHA2P01877 340 aa15.94■□□□□ 0.14
PFDN1-206ENST00000514611 ZFYP08048 801 aaPredicted RBP15.94■□□□□ 0.14
PFDN1-206ENST00000514611 COL6A1P12109 1028 aa15.94■□□□□ 0.14
PFDN1-206ENST00000514611 SYN1P17600 705 aa15.94■□□□□ 0.14
PFDN1-206ENST00000514611 TDO2P48775 406 aa15.94■□□□□ 0.14
PFDN1-206ENST00000514611 FAM83BQ5T0W9 1011 aa15.94■□□□□ 0.14
PFDN1-206ENST00000514611 GIMAP6Q6P9H5 292 aa15.94■□□□□ 0.14
PFDN1-206ENST00000514611 GOPCQ9HD26 462 aa15.94■□□□□ 0.14
PFDN1-206ENST00000514611 DDX20Q9UHI6 824 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms