RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 GOLGA8DPQ0D2H9 430 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 C4orf46Q504U0 113 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 ARHGAP29Q52LW3 1261 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 BICDL1Q6ZP65 573 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 TAB3Q8N5C8 712 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-204ENST00000504131 ST13P5Q8NFI4 369 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-204ENST00000504131 AMOTL2Q9Y2J4 779 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 MORC2Q9Y6X9 1032 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-204ENST00000504131 CCDC171Q6TFL3 1326 aa6.91□□□□□ -1.3
CLCN3-204ENST00000504131 RANBP6O60518 1105 aaKnown RBP6.9□□□□□ -1.3
CLCN3-204ENST00000504131 YEATS4O95619 227 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 TMTC4Q5T4D3 741 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 CADPS2Q86UW7 1296 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 TMEM232C9JQI7 657 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 RASA4O43374 803 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 AKR1B10O60218 316 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 ATP5HO75947 161 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 TRPC1P48995 793 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 ZNF132P52740 706 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 SLC8A3P57103 927 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 TJAP1Q5JTD0 557 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 CFAP70Q5T0N1 1121 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 SFMBT2Q5VUG0 894 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 PACS2Q86VP3 889 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 DDX42Q86XP3 938 aaKnown RBP eCLIP6.9□□□□□ -1.3
CLCN3-204ENST00000504131 SEPT1Q8WYJ6 367 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 TUBA1CQ9BQE3 449 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 CCDC28BQ9BUN5 200 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 XAB2Q9HCS7 855 aaKnown RBP6.9□□□□□ -1.3
CLCN3-204ENST00000504131 DDX28Q9NUL7 540 aaKnown RBP6.9□□□□□ -1.3
CLCN3-204ENST00000504131 STK39Q9UEW8 545 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 ATP6V1HQ9UI12 483 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 CD2APQ9Y5K6 639 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 A0A0G2JS52 829 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 CTAGE9A4FU28 777 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 GNL1P36915 607 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-204ENST00000504131 ELF2Q15723 593 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 VPS36Q86VN1 386 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 RAB11FIP4Q86YS3 637 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 TEX9Q8N6V9 391 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 KIF1BPQ96EK5 621 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 C2orf49Q9BVC5 232 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-204ENST00000504131 PRKAG2Q9UGJ0 569 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 CROTQ9UKG9 612 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 FAM50BQ9Y247 325 aa6.9□□□□□ -1.3
CLCN3-204ENST00000504131 HNRNPCL2B2RXH8 293 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 HNRNPCL1O60812 293 aaKnown RBP6.9□□□□□ -1.31
CLCN3-204ENST00000504131 PDE1BQ01064 536 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 ELMSAN1Q6PJG2 1045 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 HOOK2Q96ED9 719 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 IFT74Q96LB3 600 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 MTMR9Q96QG7 549 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 STMN4Q9H169 189 aaPredicted RBP6.9□□□□□ -1.31
CLCN3-204ENST00000504131 DNAAF2Q9NVR5 837 aaKnown RBP6.9□□□□□ -1.31
CLCN3-204ENST00000504131 SNAPC4Q5SXM2 1469 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 AXIN1O15169 862 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 RNASEH2AO75792 299 aaKnown RBP6.9□□□□□ -1.31
CLCN3-204ENST00000504131 CHGBP05060 677 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 STMN1P16949 149 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 NUP62P37198 522 aaPredicted RBP6.9□□□□□ -1.31
CLCN3-204ENST00000504131 TBX4P57082 545 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 ZBED6P86452 979 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 LAMC2Q13753 1193 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 PREPLQ4J6C6 727 aaPredicted RBP6.9□□□□□ -1.31
CLCN3-204ENST00000504131 TTC39BQ5VTQ0 682 aaPredicted RBP6.9□□□□□ -1.31
CLCN3-204ENST00000504131 SMYD5Q6GMV2 418 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 PASD1Q8IV76 773 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 CDC26Q8NHZ8 85 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 GTF3C4Q9UKN8 822 aa6.9□□□□□ -1.31
CLCN3-204ENST00000504131 SYNJ2O15056 1496 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 SYCE3A1L190 88 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 NBPF26B4DH59 902 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 ANKRD65E5RJM6 399 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 EPN2O95208 641 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 ANGPT1Q15389 498 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 CCDC122Q5T0U0 273 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 BARGINQ6ZT62 677 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 RFX8Q6ZV50 586 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 LRRC49Q8IUZ0 686 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 KIAA2013Q8IYS2 634 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 NBPF15Q8N660 670 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 GPATCH3Q96I76 525 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 CCDC77Q9BR77 488 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 RRN3Q9NYV6 651 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 NOB1Q9ULX3 412 aaKnown RBP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 RAD50Q92878 1312 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 SHROOM2Q13796 1616 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 SAMD9Q5K651 1589 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 SH3D21A4FU49 640 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 HSD17B7P56937 341 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 GJA9P57773 515 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 ACTN3Q08043 901 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-204ENST00000504131 POSTNQ15063 836 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 FBXW10Q5XX13 1052 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 CEP85Q6P2H3 762 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 C1orf228Q6PIY5 440 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 TLK2Q86UE8 772 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 WDR60Q8WVS4 1066 aa6.89□□□□□ -1.31
CLCN3-204ENST00000504131 LTV1Q96GA3 475 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms