RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 PCDHA7Q9UN72 937 aa24.41■■□□□ 1.5
FGFR1-223ENST00000496296 ZBTB12Q9Y330 459 aaPredicted RBP24.41■■□□□ 1.5
FGFR1-223ENST00000496296 OFD1O75665 1012 aa24.4■■□□□ 1.5
FGFR1-223ENST00000496296 TCP10Q12799 353 aa24.4■■□□□ 1.5
FGFR1-223ENST00000496296 TRIM29Q14134 588 aa24.4■■□□□ 1.5
FGFR1-223ENST00000496296 OTUD7BQ6GQQ9 843 aa24.4■■□□□ 1.5
FGFR1-223ENST00000496296 PRMT6Q96LA8 375 aaPredicted RBP24.4■■□□□ 1.5
FGFR1-223ENST00000496296 ENTPD3O75355 529 aa24.39■■□□□ 1.5
FGFR1-223ENST00000496296 YBX3P16989 372 aaKnown RBP eCLIP24.39■■□□□ 1.5
FGFR1-223ENST00000496296 KIF5BP33176 963 aa24.39■■□□□ 1.5
FGFR1-223ENST00000496296 ANO6Q4KMQ2 910 aa24.39■■□□□ 1.5
FGFR1-223ENST00000496296 ZSCAN29Q8IWY8 852 aaPredicted RBP24.39■■□□□ 1.5
FGFR1-223ENST00000496296 CRACR2BQ8N4Y2 399 aaPredicted RBP24.39■■□□□ 1.5
FGFR1-223ENST00000496296 MRPS27Q92552 414 aaKnown RBP24.39■■□□□ 1.5
FGFR1-223ENST00000496296 FAM198AQ9UFP1 575 aa24.39■■□□□ 1.5
FGFR1-223ENST00000496296 STX8Q9UNK0 236 aa24.39■■□□□ 1.5
FGFR1-223ENST00000496296 SPDYE2BA6NHP3 402 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 KIF28PB7ZC32 967 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 AP5Z1O43299 807 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 PTMAP06454 111 aaKnown RBP24.38■■□□□ 1.49
FGFR1-223ENST00000496296 SPDYE6P0CI01 402 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 ME1P48163 572 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 AKAP17AQ02040 695 aaKnown RBP24.38■■□□□ 1.49
FGFR1-223ENST00000496296 FMR1NBQ8N0W7 255 aaPredicted RBP24.38■■□□□ 1.49
FGFR1-223ENST00000496296 PNMA1Q8ND90 353 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 CBX8Q9HC52 389 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 PI4KBQ9UBF8 816 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 DEXIO95424 95 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 MMP14P50281 582 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 FSIP1Q8NA03 581 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 MAP3K14Q99558 947 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 TRIM34Q9BYJ4 488 aa24.38■■□□□ 1.49
FGFR1-223ENST00000496296 KRT40Q6A162 431 aa24.37■■□□□ 1.49
FGFR1-223ENST00000496296 RNF26Q9BY78 433 aaPredicted RBP24.37■■□□□ 1.49
FGFR1-223ENST00000496296 CLIC4Q9Y696 253 aa24.37■■□□□ 1.49
FGFR1-223ENST00000496296 SPTLC2O15270 562 aa24.36■■□□□ 1.49
FGFR1-223ENST00000496296 KINO60870 393 aaKnown RBP24.36■■□□□ 1.49
FGFR1-223ENST00000496296 TPM3P06753 285 aa24.36■■□□□ 1.49
FGFR1-223ENST00000496296 U2AF2P26368 475 aaKnown RBP eCLIP24.36■■□□□ 1.49
FGFR1-223ENST00000496296 STK38Q15208 465 aa24.36■■□□□ 1.49
FGFR1-223ENST00000496296 ANO1Q5XXA6 986 aa24.36■■□□□ 1.49
FGFR1-223ENST00000496296 NBPF11Q86T75 865 aa24.36■■□□□ 1.49
FGFR1-223ENST00000496296 ZFPM1Q8IX07 1006 aa24.36■■□□□ 1.49
FGFR1-223ENST00000496296 CCDC82Q8N4S0 544 aa24.36■■□□□ 1.49
FGFR1-223ENST00000496296 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.36■■□□□ 1.49
FGFR1-223ENST00000496296 PLIN4Q96Q06 1357 aa24.36■■□□□ 1.49
FGFR1-223ENST00000496296 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.36■■□□□ 1.49
FGFR1-223ENST00000496296 FOXP4Q8IVH2 680 aaPredicted RBP24.36■■□□□ 1.49
FGFR1-223ENST00000496296 MTMR14Q8NCE2 650 aa24.36■■□□□ 1.49
FGFR1-223ENST00000496296 NAP1L5Q96NT1 182 aaPredicted RBP24.36■■□□□ 1.49
FGFR1-223ENST00000496296 MYO1BO43795 1136 aa24.35■■□□□ 1.49
FGFR1-223ENST00000496296 RPS12P25398 132 aaKnown RBP24.35■■□□□ 1.49
FGFR1-223ENST00000496296 EIF6P56537 245 aaKnown RBP24.35■■□□□ 1.49
FGFR1-223ENST00000496296 RASSF7Q02833 373 aa24.35■■□□□ 1.49
FGFR1-223ENST00000496296 TMTC3Q6ZXV5 915 aa24.35■■□□□ 1.49
FGFR1-223ENST00000496296 CMTR1Q8N1G2 835 aaKnown RBP24.35■■□□□ 1.49
FGFR1-223ENST00000496296 CCDC17Q96LX7 622 aa24.35■■□□□ 1.49
FGFR1-223ENST00000496296 TMEM47Q9BQJ4 181 aa24.35■■□□□ 1.49
FGFR1-223ENST00000496296 MYH6P13533 1939 aa24.35■■□□□ 1.49
FGFR1-223ENST00000496296 ARFGEF1Q9Y6D6 1849 aa24.35■■□□□ 1.49
FGFR1-223ENST00000496296 DDTLA6NHG4 134 aaPredicted RBP24.34■■□□□ 1.49
FGFR1-223ENST00000496296 SLC39A14Q15043 492 aa24.34■■□□□ 1.49
FGFR1-223ENST00000496296 COL2A1P02458 1487 aaPredicted RBP24.34■■□□□ 1.49
FGFR1-223ENST00000496296 TOP1P11387 765 aaKnown RBP24.34■■□□□ 1.49
FGFR1-223ENST00000496296 SHMT1P34896 483 aa24.34■■□□□ 1.49
FGFR1-223ENST00000496296 GNAQP50148 359 aa24.34■■□□□ 1.49
FGFR1-223ENST00000496296 STX1AQ16623 288 aa24.34■■□□□ 1.49
FGFR1-223ENST00000496296 PPP4R3BQ5MIZ7 849 aa24.34■■□□□ 1.49
FGFR1-223ENST00000496296 CEP95Q96GE4 821 aa24.34■■□□□ 1.49
FGFR1-223ENST00000496296 AIFM3Q96NN9 605 aa24.34■■□□□ 1.49
FGFR1-223ENST00000496296 GJB4Q9NTQ9 266 aa24.34■■□□□ 1.49
FGFR1-223ENST00000496296 ZNF70Q9UC06 446 aaPredicted RBP24.34■■□□□ 1.49
FGFR1-223ENST00000496296 PRPF3O43395 683 aaKnown RBP24.33■■□□□ 1.49
FGFR1-223ENST00000496296 XBP1P17861 261 aa24.33■■□□□ 1.49
FGFR1-223ENST00000496296 ZNF165P49910 485 aa24.33■■□□□ 1.49
FGFR1-223ENST00000496296 AXDND1Q5T1B0 1012 aaPredicted RBP24.33■■□□□ 1.49
FGFR1-223ENST00000496296 ATRNL1Q5VV63 1379 aa24.33■■□□□ 1.48
FGFR1-223ENST00000496296 FAM237AA0A1B0GTK4 181 aa24.32■■□□□ 1.48
FGFR1-223ENST00000496296 PPP6R2O75170 966 aa24.32■■□□□ 1.48
FGFR1-223ENST00000496296 PLEKHA8P1O95397 391 aa24.32■■□□□ 1.48
FGFR1-223ENST00000496296 AKR1B1P15121 316 aa24.32■■□□□ 1.48
FGFR1-223ENST00000496296 TERF1P54274 439 aa24.32■■□□□ 1.48
FGFR1-223ENST00000496296 GNL2Q13823 731 aaKnown RBP24.32■■□□□ 1.48
FGFR1-223ENST00000496296 LUZP1Q86V48 1076 aa24.32■■□□□ 1.48
FGFR1-223ENST00000496296 CMA1P23946 247 aa24.32■■□□□ 1.48
FGFR1-223ENST00000496296 GRM4Q14833 912 aa24.32■■□□□ 1.48
FGFR1-223ENST00000496296 IQCB1Q15051 598 aa24.32■■□□□ 1.48
FGFR1-223ENST00000496296 SF3A1Q15459 793 aaKnown RBP24.32■■□□□ 1.48
FGFR1-223ENST00000496296 SPDYE2Q495Y8 402 aa24.32■■□□□ 1.48
FGFR1-223ENST00000496296 CLRN2A0PK11 232 aa24.31■■□□□ 1.48
FGFR1-223ENST00000496296 NOVP48745 357 aa24.31■■□□□ 1.48
FGFR1-223ENST00000496296 FUT2Q10981 343 aa24.31■■□□□ 1.48
FGFR1-223ENST00000496296 SH3BP5LQ7L8J4 393 aa24.31■■□□□ 1.48
FGFR1-223ENST00000496296 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.31■■□□□ 1.48
FGFR1-223ENST00000496296 MTMR4Q9NYA4 1195 aa24.31■■□□□ 1.48
FGFR1-223ENST00000496296 MYH8P13535 1937 aa24.31■■□□□ 1.48
FGFR1-223ENST00000496296 TCP10L2B9ZVM9 353 aa24.3■■□□□ 1.48
FGFR1-223ENST00000496296 FZD9O00144 591 aa24.3■■□□□ 1.48
FGFR1-223ENST00000496296 MPHOSPH10O00566 681 aaKnown RBP24.3■■□□□ 1.48
FGFR1-223ENST00000496296 PTPAQ15257 358 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms