RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PRKAG3Q9UGI9 489 aa7.62□□□□□ -1.19
HMGB1P38-201ENST00000490557 ANGEL1Q9UNK9 670 aaKnown RBP7.62□□□□□ -1.19
HMGB1P38-201ENST00000490557 CNTNAP4Q9C0A0 1308 aa7.61□□□□□ -1.19
HMGB1P38-201ENST00000490557 A0A1W2PQH9 124 aa7.61□□□□□ -1.19
HMGB1P38-201ENST00000490557 PRR33A8MZF0 331 aa7.61□□□□□ -1.19
HMGB1P38-201ENST00000490557 CLCN7P51798 805 aa7.61□□□□□ -1.19
HMGB1P38-201ENST00000490557 ZYXQ15942 572 aaKnown RBP7.61□□□□□ -1.19
HMGB1P38-201ENST00000490557 LARP1BQ659C4 914 aaKnown RBP7.61□□□□□ -1.19
HMGB1P38-201ENST00000490557 TMEM192Q8IY95 271 aa7.61□□□□□ -1.19
HMGB1P38-201ENST00000490557 FAM169BQ8N8A8 192 aa7.61□□□□□ -1.19
HMGB1P38-201ENST00000490557 PIWIL2Q8TC59 973 aaKnown RBP7.61□□□□□ -1.19
HMGB1P38-201ENST00000490557 HRASLS5Q96KN8 279 aa7.61□□□□□ -1.19
HMGB1P38-201ENST00000490557 CAPN6Q9Y6Q1 641 aa7.61□□□□□ -1.19
HMGB1P38-201ENST00000490557 PMS1P54277 932 aaKnown RBP7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 CASP7P55210 303 aa7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 CLEC16AQ2KHT3 1053 aa7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 GNPTABQ3T906 1256 aa7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 NBPF12Q5TAG4 269 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 CKAP2LQ8IYA6 745 aa7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 SMARCC1Q92922 1105 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 MISP3Q96FF7 219 aa7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 FBXL18Q96ME1 805 aa7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 TRIM55Q9BYV6 548 aa7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 TRIT1Q9H3H1 467 aaKnown RBP7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 FAM86C1Q9NVL1 165 aa7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 FBXL21Q9UKT6 434 aa7.6□□□□□ -1.19
HMGB1P38-201ENST00000490557 LRRN2O75325 713 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 TP53P04637 393 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 CD97P48960 835 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 SLC7A5Q01650 507 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 TNK2Q07912 1038 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 MSMPQ1L6U9 139 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 TDRD10Q5VZ19 366 aaKnown RBP7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 ANKS3Q6ZW76 656 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 SPACA3Q8IXA5 215 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 STK11IPQ8N1F8 1099 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 DTWD2Q8NBA8 298 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 GPATCH2Q9NW75 528 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 SNX11Q9Y5W9 270 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 U3KQE9 123 aa7.59□□□□□ -1.19
HMGB1P38-201ENST00000490557 H3BS24 57 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 U2SURPO15042 1029 aaKnown RBP7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 AOC3Q16853 763 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 NKPD1Q17RQ9 610 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 VHLLQ6RSH7 139 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 ASB11Q8WXH4 323 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 Q96M66 194 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 DRC1Q96MC2 740 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 HSPA12BQ96MM6 686 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 HIRIP3Q9BW71 556 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 TNKS2Q9H2K2 1166 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 ZNF214Q9UL59 606 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 PLAGL2Q9UPG8 496 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 SLC5A6Q9Y289 635 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 PCDHB12Q9Y5F1 795 aa7.58□□□□□ -1.2
HMGB1P38-201ENST00000490557 PRKCQQ04759 706 aa7.57□□□□□ -1.2
HMGB1P38-201ENST00000490557 LRP8Q14114 963 aa7.57□□□□□ -1.2
HMGB1P38-201ENST00000490557 FXNQ16595 210 aa7.57□□□□□ -1.2
HMGB1P38-201ENST00000490557 HNRNPLLQ8WVV9 542 aaKnown RBP7.57□□□□□ -1.2
HMGB1P38-201ENST00000490557 DHX38Q92620 1227 aaKnown RBP7.57□□□□□ -1.2
HMGB1P38-201ENST00000490557 ARMC5Q96C12 935 aa7.57□□□□□ -1.2
HMGB1P38-201ENST00000490557 ZSWIM5Q9P217 1185 aa7.57□□□□□ -1.2
HMGB1P38-201ENST00000490557 VAV3Q9UKW4 847 aa7.57□□□□□ -1.2
HMGB1P38-201ENST00000490557 PCDHB10Q9UN67 800 aa7.57□□□□□ -1.2
HMGB1P38-201ENST00000490557 LTBP3Q9NS15 1303 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 DDAH1O94760 285 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 MED26O95402 600 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 NMIQ13287 307 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 IKZF1Q13422 519 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 AUHQ13825 339 aaKnown RBP7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 TCEAL1Q15170 157 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 NBPF9Q3BBW0 867 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 THAP5Q7Z6K1 395 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 VSIG10LQ86VR7 867 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 DTX1Q86Y01 620 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 FLCNQ8NFG4 579 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 UBE2FQ969M7 185 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 VWCEQ96DN2 955 aa7.56□□□□□ -1.2
HMGB1P38-201ENST00000490557 KIAA1324LA8MWY0 1029 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 C9IYK1 514 aa7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 NCAPHQ15003 741 aa7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 NOL9Q5SY16 702 aaKnown RBP7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 HEATR6Q6AI08 1181 aaKnown RBP7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 KIAA1211LQ6NV74 962 aa7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 C7orf61Q8IZ16 206 aa7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 DSCC1Q9BVC3 393 aa7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 GPR62Q9BZJ7 368 aa7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 GBP3Q9H0R5 595 aa7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 ST14Q9Y5Y6 855 aa7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 COL17A1Q9UMD9 1497 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P38-201ENST00000490557 WNT11O96014 354 aa7.54□□□□□ -1.2
HMGB1P38-201ENST00000490557 PRNPP04156 253 aa7.54□□□□□ -1.2
HMGB1P38-201ENST00000490557 NAT2P11245 290 aa7.54□□□□□ -1.2
HMGB1P38-201ENST00000490557 SPINK2P20155 84 aa7.54□□□□□ -1.2
HMGB1P38-201ENST00000490557 AXDND1Q5T1B0 1012 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P38-201ENST00000490557 SOGA3Q5TF21 947 aa7.54□□□□□ -1.2
HMGB1P38-201ENST00000490557 DCAF15Q66K64 600 aa7.54□□□□□ -1.2
HMGB1P38-201ENST00000490557 PPFIBP1Q86W92 1011 aa7.54□□□□□ -1.2
HMGB1P38-201ENST00000490557 BCL7CQ8WUZ0 217 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P38-201ENST00000490557 PRDM14Q9GZV8 571 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms