RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 POTEEQ6S8J3 1075 aa20.86■□□□□ 0.93
ATG3-205ENST00000488910 PAGR1Q9BTK6 254 aa20.86■□□□□ 0.93
ATG3-205ENST00000488910 NAPBQ9H115 298 aa20.86■□□□□ 0.93
ATG3-205ENST00000488910 OSBPL3Q9H4L5 887 aa20.86■□□□□ 0.93
ATG3-205ENST00000488910 VCPKMTQ9H867 229 aa20.86■□□□□ 0.93
ATG3-205ENST00000488910 BRCA2P51587 3418 aa20.86■□□□□ 0.93
ATG3-205ENST00000488910 SLC3A2P08195 630 aaKnown RBP20.85■□□□□ 0.93
ATG3-205ENST00000488910 EEF2P13639 858 aaKnown RBP20.85■□□□□ 0.93
ATG3-205ENST00000488910 PLEKHM2Q8IWE5 1019 aa20.85■□□□□ 0.93
ATG3-205ENST00000488910 ZNF444Q8N0Y2 327 aaPredicted RBP20.85■□□□□ 0.93
ATG3-205ENST00000488910 NKX2-3Q8TAU0 364 aa20.85■□□□□ 0.93
ATG3-205ENST00000488910 SPDYE16A6NNV3 312 aaPredicted RBP20.84■□□□□ 0.93
ATG3-205ENST00000488910 TRIM6-TRIM34B2RNG4 842 aa20.84■□□□□ 0.93
ATG3-205ENST00000488910 PEX10O60683 326 aa20.84■□□□□ 0.93
ATG3-205ENST00000488910 CNMDO75829 334 aa20.84■□□□□ 0.93
ATG3-205ENST00000488910 CCL5P13501 91 aa20.84■□□□□ 0.93
ATG3-205ENST00000488910 CLEC10AQ8IUN9 316 aa20.84■□□□□ 0.93
ATG3-205ENST00000488910 NUDT12Q9BQG2 462 aa20.84■□□□□ 0.93
ATG3-205ENST00000488910 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.84■□□□□ 0.93
ATG3-205ENST00000488910 TANGO6Q9C0B7 1094 aa20.84■□□□□ 0.93
ATG3-205ENST00000488910 WDR46O15213 610 aaKnown RBP20.83■□□□□ 0.93
ATG3-205ENST00000488910 GJB1P08034 283 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 ELNP15502 786 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 ATP2B2Q01814 1243 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 PDE4BQ07343 736 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 MCMDC2Q4G0Z9 681 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 KIAA1755Q5JYT7 1200 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 PLEKHH3Q7Z736 793 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 STK11IPQ8N1F8 1099 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 SOCS4Q8WXH5 440 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 RNF208Q9H0X6 261 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 GOPCQ9HD26 462 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 NYAP2Q9P242 653 aa20.83■□□□□ 0.93
ATG3-205ENST00000488910 INHAP05111 366 aa20.82■□□□□ 0.92
ATG3-205ENST00000488910 XRCC5P13010 732 aaKnown RBP20.82■□□□□ 0.92
ATG3-205ENST00000488910 CAPN2P17655 700 aa20.82■□□□□ 0.92
ATG3-205ENST00000488910 CCDC129Q6ZRS4 1044 aa20.82■□□□□ 0.92
ATG3-205ENST00000488910 GPR142Q7Z601 462 aa20.82■□□□□ 0.92
ATG3-205ENST00000488910 MB21D1Q8N884 522 aa20.82■□□□□ 0.92
ATG3-205ENST00000488910 RILPL2Q969X0 211 aa20.82■□□□□ 0.92
ATG3-205ENST00000488910 PORCNQ9H237 461 aa20.82■□□□□ 0.92
ATG3-205ENST00000488910 PDE4DIPQ5VU43 2346 aa20.82■□□□□ 0.92
ATG3-205ENST00000488910 DSG3P32926 999 aa20.81■□□□□ 0.92
ATG3-205ENST00000488910 GJA8P48165 433 aa20.81■□□□□ 0.92
ATG3-205ENST00000488910 PPARAQ07869 468 aa20.81■□□□□ 0.92
ATG3-205ENST00000488910 ALX1Q15699 326 aa20.81■□□□□ 0.92
ATG3-205ENST00000488910 TRMT44Q8IYL2 757 aaKnown RBP20.81■□□□□ 0.92
ATG3-205ENST00000488910 SPICE1Q8N0Z3 855 aa20.81■□□□□ 0.92
ATG3-205ENST00000488910 CWC22Q9HCG8 908 aaKnown RBP20.81■□□□□ 0.92
ATG3-205ENST00000488910 BTBD7Q9P203 1132 aa20.81■□□□□ 0.92
ATG3-205ENST00000488910 MKI67P46013 3256 aaKnown RBP20.8■□□□□ 0.92
ATG3-205ENST00000488910 IGKV6D-41A0A0C4DH26 115 aa20.8■□□□□ 0.92
ATG3-205ENST00000488910 FLOT1O75955 427 aa20.8■□□□□ 0.92
ATG3-205ENST00000488910 HMGCRP04035 888 aa20.8■□□□□ 0.92
ATG3-205ENST00000488910 MORN1Q5T089 497 aa20.8■□□□□ 0.92
ATG3-205ENST00000488910 USP6NLQ92738 828 aa20.8■□□□□ 0.92
ATG3-205ENST00000488910 FAM227BQ96M60 508 aa20.8■□□□□ 0.92
ATG3-205ENST00000488910 UNC93B1Q9H1C4 597 aa20.8■□□□□ 0.92
ATG3-205ENST00000488910 GREB1LQ9C091 1923 aaPredicted RBP20.8■□□□□ 0.92
ATG3-205ENST00000488910 FOXP2O15409 715 aa20.79■□□□□ 0.92
ATG3-205ENST00000488910 PRDM1O75626 825 aa20.79■□□□□ 0.92
ATG3-205ENST00000488910 CYP2B6P20813 491 aa20.79■□□□□ 0.92
ATG3-205ENST00000488910 RGS2P41220 211 aa20.79■□□□□ 0.92
ATG3-205ENST00000488910 MKL1Q969V6 931 aa20.79■□□□□ 0.92
ATG3-205ENST00000488910 SYNPO2Q9UMS6 1093 aa20.79■□□□□ 0.92
ATG3-205ENST00000488910 PLXNB2O15031 1838 aa20.78■□□□□ 0.92
ATG3-205ENST00000488910 A0A0D9SFI3 127 aa20.78■□□□□ 0.92
ATG3-205ENST00000488910 TSPY3P0CV98 308 aa20.78■□□□□ 0.92
ATG3-205ENST00000488910 TSPY8P0CW00 308 aa20.78■□□□□ 0.92
ATG3-205ENST00000488910 SDSP20132 328 aa20.78■□□□□ 0.92
ATG3-205ENST00000488910 VPS53Q5VIR6 699 aa20.78■□□□□ 0.92
ATG3-205ENST00000488910 NEDD1Q8NHV4 660 aa20.78■□□□□ 0.92
ATG3-205ENST00000488910 MTMR4Q9NYA4 1195 aa20.78■□□□□ 0.92
ATG3-205ENST00000488910 CLIP2Q9UDT6 1046 aa20.78■□□□□ 0.92
ATG3-205ENST00000488910 ANAPC4Q9UJX5 808 aa20.78■□□□□ 0.92
ATG3-205ENST00000488910 RLFQ13129 1914 aa20.78■□□□□ 0.92
ATG3-205ENST00000488910 SLC15A5A6NIM6 579 aa20.77■□□□□ 0.92
ATG3-205ENST00000488910 SGPL1O95470 568 aa20.77■□□□□ 0.92
ATG3-205ENST00000488910 PTPREP23469 700 aa20.77■□□□□ 0.92
ATG3-205ENST00000488910 MFAP1P55081 439 aaKnown RBP20.77■□□□□ 0.92
ATG3-205ENST00000488910 IRX6P78412 446 aaPredicted RBP20.77■□□□□ 0.92
ATG3-205ENST00000488910 NMIQ13287 307 aaPredicted RBP20.77■□□□□ 0.92
ATG3-205ENST00000488910 PPP4R3BQ5MIZ7 849 aa20.77■□□□□ 0.92
ATG3-205ENST00000488910 SHCBP1Q8NEM2 672 aa20.77■□□□□ 0.92
ATG3-205ENST00000488910 SPATC1LQ9H0A9 340 aa20.77■□□□□ 0.92
ATG3-205ENST00000488910 ADAMTS5Q9UNA0 930 aa20.77■□□□□ 0.92
ATG3-205ENST00000488910 IVNS1ABPQ9Y6Y0 642 aa20.77■□□□□ 0.92
ATG3-205ENST00000488910 PLIN4Q96Q06 1357 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 F5H6K3 240 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 HIP1O00291 1037 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 STRNO43815 780 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 RAD21O60216 631 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 TTLL1O95922 423 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 TFAP4Q01664 338 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 KLRC3Q07444 240 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 MAP2K5Q13163 448 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 WDR78Q5VTH9 848 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 U2AF1L4Q8WU68 220 aaKnown RBP20.76■□□□□ 0.91
ATG3-205ENST00000488910 CEP95Q96GE4 821 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 MOV10L1Q9BXT6 1211 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms