RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 RASGRP2Q7LDG7 609 aa16.07■□□□□ 0.16
RER1-207ENST00000488353 MICALL1Q8N3F8 863 aa16.07■□□□□ 0.16
RER1-207ENST00000488353 GPATCH11Q8N954 259 aa16.07■□□□□ 0.16
RER1-207ENST00000488353 MAP3K14Q99558 947 aa16.07■□□□□ 0.16
RER1-207ENST00000488353 KCNH3Q9ULD8 1083 aa16.07■□□□□ 0.16
RER1-207ENST00000488353 CCDC152Q4G0S7 254 aa16.07■□□□□ 0.16
RER1-207ENST00000488353 ZKSCAN3Q9BRR0 538 aa16.07■□□□□ 0.16
RER1-207ENST00000488353 LY9Q9HBG7 655 aa16.07■□□□□ 0.16
RER1-207ENST00000488353 BCL9LQ86UU0 1499 aa16.07■□□□□ 0.16
RER1-207ENST00000488353 IFIT3O14879 490 aaKnown RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 FOXN1O15353 648 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 ARID4AP29374 1257 aaPredicted RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 UBE3CQ15386 1083 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 E2F4Q16254 413 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 NTRK3Q16288 839 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 RRP12Q5JTH9 1297 aaKnown RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 PPFIBP1Q86W92 1011 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 STRBPQ96SI9 672 aaKnown RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 NAPGQ99747 312 aaPredicted RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 PLEKHA4Q9H4M7 779 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 FAM217BQ9NTX9 383 aaPredicted RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 ZSWIM5Q9P217 1185 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 ECM29Q5VYK3 1845 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 A0A1B0GTH6 734 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 SYF2O95926 243 aaKnown RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 GSCP56915 257 aaPredicted RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 MDM2Q00987 491 aaPredicted RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 RASGRF1Q13972 1273 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 MAGEB6Q8N7X4 407 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 ZNF512BQ96KM6 892 aaPredicted RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 ARMT1Q9H993 441 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 TTF2Q9UNY4 1162 aaKnown RBP16.06■□□□□ 0.16
RER1-207ENST00000488353 TACC3Q9Y6A5 838 aa16.06■□□□□ 0.16
RER1-207ENST00000488353 LRP5O75197 1615 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 TCRBV5S4A2TA0A5A2 114 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 PRPF6O94906 941 aaKnown RBP16.05■□□□□ 0.16
RER1-207ENST00000488353 SLC5A1P13866 664 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 MCM3P25205 808 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 GUCY1A2P33402 732 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 FMR1Q06787 632 aaKnown RBP eCLIP16.05■□□□□ 0.16
RER1-207ENST00000488353 C3orf67Q6ZVT6 689 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 CMTR1Q8N1G2 835 aaKnown RBP16.05■□□□□ 0.16
RER1-207ENST00000488353 SLC35F6Q8N357 371 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 SECISBP2LQ93073 1101 aaKnown RBP16.05■□□□□ 0.16
RER1-207ENST00000488353 TMEM87BQ96K49 555 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 MYO1AQ9UBC5 1043 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 MAN1B1Q9UKM7 699 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 KCNJ14Q9UNX9 436 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 SLC12A7Q9Y666 1083 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 COL4A1P02462 1669 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 ERLIN2O94905 339 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 MBD4O95243 580 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
RER1-207ENST00000488353 PSEN1P49768 467 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 BCAMP50895 628 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 SSRP1Q08945 709 aaKnown RBP16.05■□□□□ 0.16
RER1-207ENST00000488353 ERFEQ4G0M1 354 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 IFNL3Q8IZI9 196 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 SPATA5Q8NB90 893 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 CCDC148Q8NFR7 591 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 NAPBQ9H115 298 aa16.05■□□□□ 0.16
RER1-207ENST00000488353 EPB41L4AQ9HCS5 686 aaPredicted RBP16.05■□□□□ 0.16
RER1-207ENST00000488353 WTIPA6NIX2 430 aaPredicted RBP16.04■□□□□ 0.16
RER1-207ENST00000488353 BTBD18B2RXH4 712 aa16.04■□□□□ 0.16
RER1-207ENST00000488353 PRKAB2O43741 272 aa16.04■□□□□ 0.16
RER1-207ENST00000488353 VPS72Q15906 364 aa16.04■□□□□ 0.16
RER1-207ENST00000488353 MAP9Q49MG5 647 aa16.04■□□□□ 0.16
RER1-207ENST00000488353 NT5DC1Q5TFE4 455 aa16.04■□□□□ 0.16
RER1-207ENST00000488353 IQSEC3Q9UPP2 1182 aaPredicted RBP16.04■□□□□ 0.16
RER1-207ENST00000488353 ZNF652Q9Y2D9 606 aa16.04■□□□□ 0.16
RER1-207ENST00000488353 RREB1Q92766 1687 aa16.04■□□□□ 0.16
RER1-207ENST00000488353 A0A0U1RQJ8 604 aa16.04■□□□□ 0.16
RER1-207ENST00000488353 UQCRFS1P1P0C7P4 283 aa16.04■□□□□ 0.16
RER1-207ENST00000488353 RBL2Q08999 1139 aa16.04■□□□□ 0.16
RER1-207ENST00000488353 ATRIPQ8WXE1 791 aa16.04■□□□□ 0.16
RER1-207ENST00000488353 SAMSN1Q9NSI8 373 aaKnown RBP16.04■□□□□ 0.16
RER1-207ENST00000488353 PATL2C9JE40 543 aaKnown RBP16.03■□□□□ 0.16
RER1-207ENST00000488353 USP8P40818 1118 aa16.03■□□□□ 0.16
RER1-207ENST00000488353 GRIN1Q05586 938 aa16.03■□□□□ 0.16
RER1-207ENST00000488353 CHRNDQ07001 517 aa16.03■□□□□ 0.16
RER1-207ENST00000488353 POSTNQ15063 836 aa16.03■□□□□ 0.16
RER1-207ENST00000488353 IGSF22Q8N9C0 903 aa16.03■□□□□ 0.16
RER1-207ENST00000488353 TRIML1Q8N9V2 468 aa16.03■□□□□ 0.16
RER1-207ENST00000488353 NOA1Q8NC60 698 aaKnown RBP16.03■□□□□ 0.16
RER1-207ENST00000488353 TRMT44Q8IYL2 757 aaKnown RBP16.03■□□□□ 0.16
RER1-207ENST00000488353 MYO6Q9UM54 1294 aa16.03■□□□□ 0.16
RER1-207ENST00000488353 CHD4Q14839 1912 aa16.02■□□□□ 0.16
RER1-207ENST00000488353 EBAG9O00559 213 aa16.02■□□□□ 0.16
RER1-207ENST00000488353 SHOX2O60902 331 aaPredicted RBP16.02■□□□□ 0.16
RER1-207ENST00000488353 SARSP49591 514 aaKnown RBP16.02■□□□□ 0.16
RER1-207ENST00000488353 MORC3Q14149 939 aa16.02■□□□□ 0.16
RER1-207ENST00000488353 CDC5LQ99459 802 aaKnown RBP16.02■□□□□ 0.16
RER1-207ENST00000488353 ATRNO75882 1429 aa16.02■□□□□ 0.15
RER1-207ENST00000488353 TFRCP02786 760 aaKnown RBP16.02■□□□□ 0.15
RER1-207ENST00000488353 ERCC5P28715 1186 aaPredicted RBP16.02■□□□□ 0.15
RER1-207ENST00000488353 SGMS1Q86VZ5 419 aa16.02■□□□□ 0.15
RER1-207ENST00000488353 CNGA4Q8IV77 575 aa16.02■□□□□ 0.15
RER1-207ENST00000488353 CCDC24Q8N4L8 307 aa16.02■□□□□ 0.15
RER1-207ENST00000488353 CPLX3Q8WVH0 158 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms