RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TRANK1O15050 2925 aa18.88■□□□□ 0.61
U2AF1-211ENST00000486519 TLL1O43897 1013 aa18.88■□□□□ 0.61
U2AF1-211ENST00000486519 VCAM1P19320 739 aa18.88■□□□□ 0.61
U2AF1-211ENST00000486519 RABGGTBP53611 331 aa18.88■□□□□ 0.61
U2AF1-211ENST00000486519 TIMM10P62072 90 aa18.88■□□□□ 0.61
U2AF1-211ENST00000486519 IRX5P78411 483 aaPredicted RBP18.88■□□□□ 0.61
U2AF1-211ENST00000486519 MFSD5Q6N075 450 aa18.88■□□□□ 0.61
U2AF1-211ENST00000486519 ANKRD33Q7Z3H0 272 aa18.88■□□□□ 0.61
U2AF1-211ENST00000486519 METTL16Q86W50 562 aaKnown RBP18.88■□□□□ 0.61
U2AF1-211ENST00000486519 MAPKAPK5Q8IW41 473 aa18.88■□□□□ 0.61
U2AF1-211ENST00000486519 ACER1Q8TDN7 264 aa18.88■□□□□ 0.61
U2AF1-211ENST00000486519 CEP126Q9P2H0 1117 aa18.88■□□□□ 0.61
U2AF1-211ENST00000486519 WDFY4Q6ZS81 3184 aa18.87■□□□□ 0.61
U2AF1-211ENST00000486519 ERC2O15083 957 aa18.87■□□□□ 0.61
U2AF1-211ENST00000486519 ZBTB22O15209 634 aa18.87■□□□□ 0.61
U2AF1-211ENST00000486519 GH2P01242 217 aa18.87■□□□□ 0.61
U2AF1-211ENST00000486519 SKIV2LQ15477 1246 aaKnown RBP18.87■□□□□ 0.61
U2AF1-211ENST00000486519 PDS5AQ29RF7 1337 aaKnown RBP18.87■□□□□ 0.61
U2AF1-211ENST00000486519 LBX2Q6XYB7 198 aa18.87■□□□□ 0.61
U2AF1-211ENST00000486519 PALD1Q9ULE6 856 aa18.87■□□□□ 0.61
U2AF1-211ENST00000486519 SALL2Q9Y467 1007 aaPredicted RBP18.87■□□□□ 0.61
U2AF1-211ENST00000486519 MYH1P12882 1939 aa18.86■□□□□ 0.61
U2AF1-211ENST00000486519 SPTY2D1Q68D10 685 aaPredicted RBP18.86■□□□□ 0.61
U2AF1-211ENST00000486519 PRKRIP1Q9H875 184 aaPredicted RBP18.86■□□□□ 0.61
U2AF1-211ENST00000486519 SAP30BPQ9UHR5 308 aaKnown RBP18.86■□□□□ 0.61
U2AF1-211ENST00000486519 MSRAQ9UJ68 235 aa18.86■□□□□ 0.61
U2AF1-211ENST00000486519 PARP14Q460N5 1801 aa18.86■□□□□ 0.61
U2AF1-211ENST00000486519 CIAO1O76071 339 aa18.85■□□□□ 0.61
U2AF1-211ENST00000486519 ERCC3P19447 782 aa18.85■□□□□ 0.61
U2AF1-211ENST00000486519 PPIGQ13427 754 aaKnown RBP eCLIP18.85■□□□□ 0.61
U2AF1-211ENST00000486519 TGFBRAP1Q8WUH2 860 aa18.85■□□□□ 0.61
U2AF1-211ENST00000486519 MAML3Q96JK9 1138 aa18.85■□□□□ 0.61
U2AF1-211ENST00000486519 TSPYL2Q9H2G4 693 aaPredicted RBP18.85■□□□□ 0.61
U2AF1-211ENST00000486519 HMG20BQ9P0W2 317 aa18.85■□□□□ 0.61
U2AF1-211ENST00000486519 COL11A1P12107 1806 aaPredicted RBP18.85■□□□□ 0.61
U2AF1-211ENST00000486519 FLT1P17948 1338 aa18.84■□□□□ 0.61
U2AF1-211ENST00000486519 MYADML2A6NDP7 307 aa18.84■□□□□ 0.61
U2AF1-211ENST00000486519 EPOPA6NHQ4 379 aa18.84■□□□□ 0.61
U2AF1-211ENST00000486519 SMIM22K7EJ46 135 aa18.84■□□□□ 0.61
U2AF1-211ENST00000486519 ADAMTS4O75173 837 aa18.84■□□□□ 0.61
U2AF1-211ENST00000486519 RAB30Q15771 203 aa18.84■□□□□ 0.61
U2AF1-211ENST00000486519 TOX2Q96NM4 488 aa18.84■□□□□ 0.61
U2AF1-211ENST00000486519 FEZ1Q99689 392 aa18.84■□□□□ 0.61
U2AF1-211ENST00000486519 PPP1R12CQ9BZL4 782 aa18.84■□□□□ 0.61
U2AF1-211ENST00000486519 RPAP3Q9H6T3 665 aaPredicted RBP18.84■□□□□ 0.61
U2AF1-211ENST00000486519 SLC28A3Q9HAS3 691 aa18.84■□□□□ 0.61
U2AF1-211ENST00000486519 DCDC2CA8MYV0 355 aa18.83■□□□□ 0.6
U2AF1-211ENST00000486519 PI4K2BG5E9Z4 385 aa18.83■□□□□ 0.6
U2AF1-211ENST00000486519 RARBP10826 455 aa18.83■□□□□ 0.6
U2AF1-211ENST00000486519 NHLH1Q02575 133 aa18.83■□□□□ 0.6
U2AF1-211ENST00000486519 AAK1Q2M2I8 961 aa18.83■□□□□ 0.6
U2AF1-211ENST00000486519 ADGRA1Q86SQ6 560 aa18.83■□□□□ 0.6
U2AF1-211ENST00000486519 CRACR2BQ8N4Y2 399 aaPredicted RBP18.83■□□□□ 0.6
U2AF1-211ENST00000486519 AATFQ9NY61 560 aaKnown RBP eCLIP18.83■□□□□ 0.6
U2AF1-211ENST00000486519 MTCH2Q9Y6C9 303 aa18.83■□□□□ 0.6
U2AF1-211ENST00000486519 ACLYP53396 1101 aa18.82■□□□□ 0.6
U2AF1-211ENST00000486519 RNF180Q86T96 592 aa18.82■□□□□ 0.6
U2AF1-211ENST00000486519 HERVK_113Q902F9 699 aa18.82■□□□□ 0.6
U2AF1-211ENST00000486519 CDCA7LQ96GN5 454 aa18.82■□□□□ 0.6
U2AF1-211ENST00000486519 XAGE2Q96GT9 111 aa18.82■□□□□ 0.6
U2AF1-211ENST00000486519 DHX36Q9H2U1 1008 aaKnown RBP18.82■□□□□ 0.6
U2AF1-211ENST00000486519 STARD7Q9NQZ5 370 aa18.82■□□□□ 0.6
U2AF1-211ENST00000486519 RAI14Q9P0K7 980 aa18.82■□□□□ 0.6
U2AF1-211ENST00000486519 MAP4K4O95819 1239 aaPredicted RBP18.81■□□□□ 0.6
U2AF1-211ENST00000486519 CYP2C18P33260 490 aa18.81■□□□□ 0.6
U2AF1-211ENST00000486519 FOXP4Q8IVH2 680 aaPredicted RBP18.81■□□□□ 0.6
U2AF1-211ENST00000486519 ANKS1AQ92625 1134 aa18.81■□□□□ 0.6
U2AF1-211ENST00000486519 SPATC1LQ9H0A9 340 aa18.81■□□□□ 0.6
U2AF1-211ENST00000486519 KIAA1683Q9H0B3 1180 aa18.81■□□□□ 0.6
U2AF1-211ENST00000486519 CERS4Q9HA82 394 aa18.81■□□□□ 0.6
U2AF1-211ENST00000486519 COL4A4P53420 1690 aaPredicted RBP18.81■□□□□ 0.6
U2AF1-211ENST00000486519 UMODL1Q5DID0 1318 aa18.8■□□□□ 0.6
U2AF1-211ENST00000486519 SYNRGQ9UMZ2 1314 aa18.8■□□□□ 0.6
U2AF1-211ENST00000486519 A0A1B0GUL7 405 aa18.8■□□□□ 0.6
U2AF1-211ENST00000486519 LDHCP07864 332 aa18.8■□□□□ 0.6
U2AF1-211ENST00000486519 ZNF865P0CJ78 1059 aaPredicted RBP18.8■□□□□ 0.6
U2AF1-211ENST00000486519 GSTO1P78417 241 aa18.8■□□□□ 0.6
U2AF1-211ENST00000486519 PPP2R2DQ66LE6 453 aa18.8■□□□□ 0.6
U2AF1-211ENST00000486519 CCSAPQ6IQ19 270 aaPredicted RBP18.8■□□□□ 0.6
U2AF1-211ENST00000486519 GINM1Q9NU53 330 aa18.8■□□□□ 0.6
U2AF1-211ENST00000486519 APBB1O00213 710 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 STRNO43815 780 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 ARHGEF15O94989 841 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 PGK2P07205 417 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 GUCY1A2P33402 732 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 CDK7P50613 346 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 RAB3GAP1Q15042 981 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 KCNA10Q16322 511 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 KIAA1755Q5JYT7 1200 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 PSRC1Q6PGN9 363 aaPredicted RBP18.79■□□□□ 0.6
U2AF1-211ENST00000486519 OTOP2Q7RTS6 562 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 BRWD1Q9NSI6 2320 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 ROBO3Q96MS0 1386 aa18.79■□□□□ 0.6
U2AF1-211ENST00000486519 ZNF521Q96K83 1311 aa18.78■□□□□ 0.6
U2AF1-211ENST00000486519 IL15P40933 162 aaPredicted RBP18.78■□□□□ 0.6
U2AF1-211ENST00000486519 TMEM199Q8N511 208 aa18.78■□□□□ 0.6
U2AF1-211ENST00000486519 MRPL50Q8N5N7 158 aaKnown RBP18.78■□□□□ 0.6
U2AF1-211ENST00000486519 SPATA5Q8NB90 893 aa18.78■□□□□ 0.6
U2AF1-211ENST00000486519 KLHDC9Q8NEP7 349 aa18.78■□□□□ 0.6
U2AF1-211ENST00000486519 VWCEQ96DN2 955 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms