RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
NUP50-215ENST00000484186 ZKSCAN1P17029 563 aaPredicted RBP11.32□□□□□ -0.6
NUP50-215ENST00000484186 PTPREP23469 700 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 ICA1Q05084 483 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 CACNB2Q08289 660 aaPredicted RBP11.32□□□□□ -0.6
NUP50-215ENST00000484186 CCL14Q16627 93 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 KIAA1755Q5JYT7 1200 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 WDR78Q5VTH9 848 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 TSHZ3Q63HK5 1081 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 GIMAP6Q6P9H5 292 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 NECAB2Q7Z6G3 386 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 APPBP2Q92624 585 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 LPAR1Q92633 364 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 OSBP2Q969R2 916 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 APBA2Q99767 749 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 TANGO6Q9C0B7 1094 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 SH2D4AQ9H788 454 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 ARPP21Q9UBL0 812 aaPredicted RBP11.32□□□□□ -0.6
NUP50-215ENST00000484186 TTC41PQ6P2S7 1318 aa11.32□□□□□ -0.6
NUP50-215ENST00000484186 GSG1L2A8MUP6 293 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 ERC2O15083 957 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 EVI5O60447 810 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 DSG3P32926 999 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 RRP1P56182 461 aaKnown RBP11.31□□□□□ -0.6
NUP50-215ENST00000484186 LRRFIP1Q32MZ4 808 aaKnown RBP11.31□□□□□ -0.6
NUP50-215ENST00000484186 SBK1Q52WX2 424 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 CLEC10AQ8IUN9 316 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 MB21D1Q8N884 522 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 DIS3LQ8TF46 1054 aaKnown RBP11.31□□□□□ -0.6
NUP50-215ENST00000484186 VCPKMTQ9H867 229 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 KANSL2Q9H9L4 492 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 OGDHLQ9ULD0 1010 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 IVNS1ABPQ9Y6Y0 642 aa11.31□□□□□ -0.6
NUP50-215ENST00000484186 BAZ2AQ9UIF9 1905 aaKnown RBP11.31□□□□□ -0.6
NUP50-215ENST00000484186 WDR46O15213 610 aaKnown RBP11.3□□□□□ -0.6
NUP50-215ENST00000484186 STRNO43815 780 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 FLOT1O75955 427 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 HOXC6P09630 235 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 EEF2P13639 858 aaKnown RBP11.3□□□□□ -0.6
NUP50-215ENST00000484186 GNAT2P19087 354 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
NUP50-215ENST00000484186 ATP2B2Q01814 1243 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 GRB14Q14449 540 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 MFSD14CQ5VZR4 134 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 CHRDL2Q6WN34 429 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 MOV10L1Q9BXT6 1211 aaKnown RBP11.3□□□□□ -0.6
NUP50-215ENST00000484186 NBPF3Q9H094 633 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 SPATC1LQ9H0A9 340 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 MYH7P12883 1935 aa11.3□□□□□ -0.6
NUP50-215ENST00000484186 MINDY4BA8MYZ0 360 aa11.29□□□□□ -0.6
NUP50-215ENST00000484186 PATL2C9JE40 543 aaKnown RBP11.29□□□□□ -0.6
NUP50-215ENST00000484186 GPAA1O43292 621 aa11.29□□□□□ -0.6
NUP50-215ENST00000484186 CCND3P30281 292 aaPredicted RBP11.29□□□□□ -0.6
NUP50-215ENST00000484186 FXR1P51114 621 aaKnown RBP eCLIP11.29□□□□□ -0.6
NUP50-215ENST00000484186 LHX8Q68G74 356 aa11.29□□□□□ -0.6
NUP50-215ENST00000484186 SHCBP1Q8NEM2 672 aa11.29□□□□□ -0.6
NUP50-215ENST00000484186 NPLOC4Q8TAT6 608 aa11.29□□□□□ -0.6
NUP50-215ENST00000484186 PI4K2BQ8TCG2 481 aa11.29□□□□□ -0.6
NUP50-215ENST00000484186 ATG4CQ96DT6 458 aa11.29□□□□□ -0.6
NUP50-215ENST00000484186 C11orf49Q9H6J7 331 aa11.29□□□□□ -0.6
NUP50-215ENST00000484186 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
NUP50-215ENST00000484186 FLRT1Q9NZU1 646 aa11.29□□□□□ -0.6
NUP50-215ENST00000484186 M0R2C6 588 aa11.28□□□□□ -0.6
NUP50-215ENST00000484186 APPP05067 770 aa11.28□□□□□ -0.6
NUP50-215ENST00000484186 ERCC3P19447 782 aa11.28□□□□□ -0.6
NUP50-215ENST00000484186 RASA1P20936 1047 aa11.28□□□□□ -0.6
NUP50-215ENST00000484186 PLS1Q14651 629 aa11.28□□□□□ -0.6
NUP50-215ENST00000484186 DPP9Q86TI2 863 aa11.28□□□□□ -0.6
NUP50-215ENST00000484186 STK11IPQ8N1F8 1099 aa11.28□□□□□ -0.6
NUP50-215ENST00000484186 OTUD7AQ8TE49 926 aaPredicted RBP11.28□□□□□ -0.6
NUP50-215ENST00000484186 CRBNQ96SW2 442 aa11.28□□□□□ -0.6
NUP50-215ENST00000484186 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
NUP50-215ENST00000484186 MROH8Q9H579 483 aa11.28□□□□□ -0.6
NUP50-215ENST00000484186 EPB41L4AQ9HCS5 686 aaPredicted RBP11.28□□□□□ -0.6
NUP50-215ENST00000484186 GOPCQ9HD26 462 aa11.28□□□□□ -0.6
NUP50-215ENST00000484186 RBM27Q9P2N5 1060 aaKnown RBP11.28□□□□□ -0.6
NUP50-215ENST00000484186 MYH8P13535 1937 aa11.27□□□□□ -0.6
NUP50-215ENST00000484186 RAD21O60216 631 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 SLC25A27O95847 323 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 MX1P20591 662 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 ADORA2AP29274 412 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 TDO2P48775 406 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 TMEM132BQ14DG7 1078 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 ANKRD45Q5TZF3 282 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.61
NUP50-215ENST00000484186 NCAPG2Q86XI2 1143 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 IFNL3Q8IZI9 196 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 ZNF444Q8N0Y2 327 aaPredicted RBP11.27□□□□□ -0.61
NUP50-215ENST00000484186 SEC62Q99442 399 aaKnown RBP11.27□□□□□ -0.61
NUP50-215ENST00000484186 FSD1Q9BTV5 496 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 PRO3102Q9H379 93 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 ZNF287Q9HBT7 754 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 NYAP2Q9P242 653 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
NUP50-215ENST00000484186 ADAMTS5Q9UNA0 930 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 ROBO3Q96MS0 1386 aa11.27□□□□□ -0.61
NUP50-215ENST00000484186 COBLO75128 1261 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 IGHA2P01877 340 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms