RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 RTN4Q9NQC3 1192 aaKnown RBP24.24■■□□□ 1.47
RXRB-204ENST00000483281 AFG3L2Q9Y4W6 797 aa24.24■■□□□ 1.47
RXRB-204ENST00000483281 ZHX2Q9Y6X8 837 aa24.24■■□□□ 1.47
RXRB-204ENST00000483281 CALM1P0DP23 149 aa24.23■■□□□ 1.47
RXRB-204ENST00000483281 CALM2P0DP24 149 aa24.23■■□□□ 1.47
RXRB-204ENST00000483281 CALM3P0DP25 149 aa24.23■■□□□ 1.47
RXRB-204ENST00000483281 PDIA3P30101 505 aaKnown RBP24.23■■□□□ 1.47
RXRB-204ENST00000483281 PPP2R5BQ15173 497 aa24.23■■□□□ 1.47
RXRB-204ENST00000483281 ACER1Q8TDN7 264 aa24.23■■□□□ 1.47
RXRB-204ENST00000483281 KIAA1683Q9H0B3 1180 aa24.23■■□□□ 1.47
RXRB-204ENST00000483281 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.23■■□□□ 1.47
RXRB-204ENST00000483281 DDAH1O94760 285 aa24.23■■□□□ 1.47
RXRB-204ENST00000483281 ATP2B2Q01814 1243 aa24.23■■□□□ 1.47
RXRB-204ENST00000483281 GMCL1P1Q8NEA9 526 aa24.23■■□□□ 1.47
RXRB-204ENST00000483281 ELP3Q9H9T3 547 aa24.23■■□□□ 1.47
RXRB-204ENST00000483281 C19orf81C9J6K1 198 aa24.22■■□□□ 1.47
RXRB-204ENST00000483281 USP17L10C9JJH3 530 aa24.22■■□□□ 1.47
RXRB-204ENST00000483281 SH2B1Q9NRF2 756 aaPredicted RBP24.22■■□□□ 1.47
RXRB-204ENST00000483281 ZBTB43O43298 467 aa24.22■■□□□ 1.47
RXRB-204ENST00000483281 ECE1P42892 770 aa24.22■■□□□ 1.47
RXRB-204ENST00000483281 LARP6Q9BRS8 491 aaKnown RBP24.22■■□□□ 1.47
RXRB-204ENST00000483281 TMEM88BA6NKF7 163 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 SNHG28P0DPA3 235 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 USP14P54578 494 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 BACE1P56817 501 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 SPP2Q13103 211 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 PPIL2Q13356 520 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 NFKBIBQ15653 356 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 ME3Q16798 604 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 SAPCD2Q86UD0 394 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 CCDC84Q86UT8 332 aaPredicted RBP24.21■■□□□ 1.47
RXRB-204ENST00000483281 GOPCQ9HD26 462 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 HPS5Q9UPZ3 1129 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 TLL2Q9Y6L7 1015 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 NID2Q14112 1375 aa24.21■■□□□ 1.47
RXRB-204ENST00000483281 F5H6K3 240 aa24.2■■□□□ 1.46
RXRB-204ENST00000483281 CXCL11O14625 94 aa24.2■■□□□ 1.46
RXRB-204ENST00000483281 PFKFB2O60825 505 aa24.2■■□□□ 1.46
RXRB-204ENST00000483281 KLRC3Q07444 240 aa24.2■■□□□ 1.46
RXRB-204ENST00000483281 CHMP4CQ96CF2 233 aa24.2■■□□□ 1.46
RXRB-204ENST00000483281 VCPKMTQ9H867 229 aa24.2■■□□□ 1.46
RXRB-204ENST00000483281 HUNKP57058 714 aa24.2■■□□□ 1.46
RXRB-204ENST00000483281 SH3D19Q5HYK7 790 aa24.2■■□□□ 1.46
RXRB-204ENST00000483281 LRRC47Q8N1G4 583 aaKnown RBP24.2■■□□□ 1.46
RXRB-204ENST00000483281 FANCBQ8NB91 859 aa24.2■■□□□ 1.46
RXRB-204ENST00000483281 HHIPL1Q96JK4 782 aa24.2■■□□□ 1.46
RXRB-204ENST00000483281 KCNH4Q9UQ05 1017 aa24.2■■□□□ 1.46
RXRB-204ENST00000483281 K7ELQ4 463 aaPredicted RBP24.19■■□□□ 1.46
RXRB-204ENST00000483281 HSCBQ8IWL3 235 aa24.19■■□□□ 1.46
RXRB-204ENST00000483281 GMCL1Q96IK5 515 aa24.19■■□□□ 1.46
RXRB-204ENST00000483281 TMX3Q96JJ7 454 aa24.19■■□□□ 1.46
RXRB-204ENST00000483281 USP17L2Q6R6M4 530 aa24.18■■□□□ 1.46
RXRB-204ENST00000483281 DCAF4Q8WV16 495 aa24.18■■□□□ 1.46
RXRB-204ENST00000483281 OPTNQ96CV9 577 aa24.18■■□□□ 1.46
RXRB-204ENST00000483281 C12orf42Q96LP6 360 aa24.18■■□□□ 1.46
RXRB-204ENST00000483281 SLKQ9H2G2 1235 aaPredicted RBP24.18■■□□□ 1.46
RXRB-204ENST00000483281 SLFN13Q68D06 897 aa24.18■■□□□ 1.46
RXRB-204ENST00000483281 NOL8Q76FK4 1167 aaKnown RBP24.18■■□□□ 1.46
RXRB-204ENST00000483281 LPAR1Q92633 364 aa24.18■■□□□ 1.46
RXRB-204ENST00000483281 PTPRFP10586 1907 aa24.18■■□□□ 1.46
RXRB-204ENST00000483281 GOLGA8BA8MQT2 603 aa24.17■■□□□ 1.46
RXRB-204ENST00000483281 PDHBP11177 359 aa24.17■■□□□ 1.46
RXRB-204ENST00000483281 METAP2P50579 478 aaKnown RBP eCLIP24.17■■□□□ 1.46
RXRB-204ENST00000483281 BECN1Q14457 450 aa24.17■■□□□ 1.46
RXRB-204ENST00000483281 GRM4Q14833 912 aa24.17■■□□□ 1.46
RXRB-204ENST00000483281 FEZ1Q99689 392 aa24.17■■□□□ 1.46
RXRB-204ENST00000483281 CCDC196A0A1B0GTZ2 297 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 IRF6O14896 467 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 LARGE1O95461 756 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 KIF5BP33176 963 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 NUP133Q8WUM0 1156 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 CNKSR2Q8WXI2 1034 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 OTUD5Q96G74 571 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 WNK4Q96J92 1243 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 MYL10Q9BUA6 226 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 RBM28Q9NW13 759 aaKnown RBP24.16■■□□□ 1.46
RXRB-204ENST00000483281 NAP1L2Q9ULW6 460 aaPredicted RBP24.16■■□□□ 1.46
RXRB-204ENST00000483281 PALM3A6NDB9 673 aaPredicted RBP24.16■■□□□ 1.46
RXRB-204ENST00000483281 NDUFB10O96000 172 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 ZBTB48P10074 688 aaPredicted RBP24.16■■□□□ 1.46
RXRB-204ENST00000483281 MICU3Q86XE3 530 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 CTCFLQ8NI51 663 aaPredicted RBP24.16■■□□□ 1.46
RXRB-204ENST00000483281 EMILIN3Q9NT22 766 aa24.16■■□□□ 1.46
RXRB-204ENST00000483281 FAM217BQ9NTX9 383 aaPredicted RBP24.16■■□□□ 1.46
RXRB-204ENST00000483281 TRIM75PA6NK02 468 aa24.15■■□□□ 1.46
RXRB-204ENST00000483281 GOLGA8AA7E2F4 631 aa24.15■■□□□ 1.46
RXRB-204ENST00000483281 DHX16O60231 1041 aaKnown RBP24.15■■□□□ 1.46
RXRB-204ENST00000483281 APLP1P51693 650 aa24.15■■□□□ 1.46
RXRB-204ENST00000483281 MTMR2Q13614 643 aa24.15■■□□□ 1.46
RXRB-204ENST00000483281 CUL4AQ13619 759 aa24.15■■□□□ 1.46
RXRB-204ENST00000483281 ASPRV1Q53RT3 343 aa24.15■■□□□ 1.46
RXRB-204ENST00000483281 GPATCH4Q5T3I0 446 aaKnown RBP24.15■■□□□ 1.46
RXRB-204ENST00000483281 RGMBQ6NW40 437 aa24.15■■□□□ 1.46
RXRB-204ENST00000483281 GTF3C6Q969F1 213 aa24.15■■□□□ 1.46
RXRB-204ENST00000483281 MAD2L2Q9UI95 211 aa24.15■■□□□ 1.46
RXRB-204ENST00000483281 PARP1P09874 1014 aaKnown RBP24.14■■□□□ 1.46
RXRB-204ENST00000483281 SMARCA1P28370 1054 aa24.14■■□□□ 1.46
RXRB-204ENST00000483281 GJA5P36382 358 aa24.14■■□□□ 1.46
RXRB-204ENST00000483281 GNAQP50148 359 aa24.14■■□□□ 1.46
RXRB-204ENST00000483281 SCRN1Q12765 414 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms