RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 WDR18Q9BV38 432 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 DHX36Q9H2U1 1008 aaKnown RBP5.14□□□□□ -1.59
POLR2B-208ENST00000478188 OSBPL3Q9H4L5 887 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.14□□□□□ -1.59
POLR2B-208ENST00000478188 PALD1Q9ULE6 856 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 PLIN4Q96Q06 1357 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 NUCB1Q02818 461 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 MAP3K12Q12852 859 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 SLC9C2Q5TAH2 1124 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.14□□□□□ -1.59
POLR2B-208ENST00000478188 SIAH1Q8IUQ4 282 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 DNAJC2Q99543 621 aaKnown RBP5.14□□□□□ -1.59
POLR2B-208ENST00000478188 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.14□□□□□ -1.59
POLR2B-208ENST00000478188 IRX2Q9BZI1 471 aaPredicted RBP5.14□□□□□ -1.59
POLR2B-208ENST00000478188 ARMT1Q9H993 441 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 PI4KBQ9UBF8 816 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 CSADQ9Y600 493 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 PLXNA1Q9UIW2 1896 aa5.14□□□□□ -1.59
POLR2B-208ENST00000478188 MAGEB6P1A0A0J9YX57 407 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 BAG3O95817 575 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 ALDH1A1P00352 501 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 CETPP11597 493 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 PDE1AP54750 535 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 SNAPC2Q13487 334 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 ZMYM1Q5SVZ6 1142 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 TREML2Q5T2D2 321 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 SDR42E1Q8WUS8 393 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 C12orf42Q96LP6 360 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 STRBPQ96SI9 672 aaKnown RBP5.13□□□□□ -1.59
POLR2B-208ENST00000478188 GINM1Q9NU53 330 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 SAP30BPQ9UHR5 308 aaKnown RBP5.13□□□□□ -1.59
POLR2B-208ENST00000478188 TSR3Q9UJK0 312 aaKnown RBP5.13□□□□□ -1.59
POLR2B-208ENST00000478188 ZBTB21Q9ULJ3 1066 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 SUPT16HQ9Y5B9 1047 aaKnown RBP5.13□□□□□ -1.59
POLR2B-208ENST00000478188 IGKV6D-41A0A0C4DH26 115 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 CCDC85CA6NKD9 419 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 GSG1L2A8MUP6 293 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 MBD4O95243 580 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 MX1P20591 662 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 KCNC4Q03721 635 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 PLEKHM2Q8IWE5 1019 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 TBC1D2Q9BYX2 928 aa5.13□□□□□ -1.59
POLR2B-208ENST00000478188 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.13□□□□□ -1.59
POLR2B-208ENST00000478188 TLR2O60603 784 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 FKTNO75072 461 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 IGHA2P01877 340 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 SBK1Q52WX2 424 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 KIAA1755Q5JYT7 1200 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 C12orf60Q5U649 245 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 C16orf86Q6ZW13 317 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 OTOP1Q7RTM1 612 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 CTU1Q7Z7A3 348 aaKnown RBP5.12□□□□□ -1.59
POLR2B-208ENST00000478188 FOXP4Q8IVH2 680 aaPredicted RBP5.12□□□□□ -1.59
POLR2B-208ENST00000478188 PROCA1Q8NCQ7 364 aaPredicted RBP5.12□□□□□ -1.59
POLR2B-208ENST00000478188 APPBP2Q92624 585 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 ARHGAP39Q9C0H5 1083 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 ZNFX1Q9P2E3 1918 aaKnown RBP5.12□□□□□ -1.59
POLR2B-208ENST00000478188 CYP2D7A0A087X1C5 515 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 RNF113AO15541 343 aaKnown RBP5.12□□□□□ -1.59
POLR2B-208ENST00000478188 CNMDO75829 334 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 CTR9Q6PD62 1173 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 TICAM2Q86XR7 235 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 SLC44A5Q8NCS7 719 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 NKX2-3Q8TAU0 364 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 AGTPBP1Q9UPW5 1226 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 ZMYM6O95789 1325 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 A0A1W2PRG0 241 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 PDHXO00330 501 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 GLRX3O76003 335 aaKnown RBP5.12□□□□□ -1.59
POLR2B-208ENST00000478188 GDF11O95390 407 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 HOXA7P31268 230 aaPredicted RBP5.12□□□□□ -1.59
POLR2B-208ENST00000478188 NOVP48745 357 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 TSR1Q2NL82 804 aaKnown RBP5.12□□□□□ -1.59
POLR2B-208ENST00000478188 GIMAP6Q6P9H5 292 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 ZNF280CQ8ND82 737 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 CD99L2Q8TCZ2 262 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 SEC62Q99442 399 aaKnown RBP5.12□□□□□ -1.59
POLR2B-208ENST00000478188 IL25Q9H293 177 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 ATP8A2Q9NTI2 1148 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 HPS5Q9UPZ3 1129 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 ZHX2Q9Y6X8 837 aa5.12□□□□□ -1.59
POLR2B-208ENST00000478188 A0A1W2PPC1 479 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 USP17L5A8MUK1 530 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 FGRP09769 529 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 GSPT1P15170 499 aaKnown RBP5.11□□□□□ -1.59
POLR2B-208ENST00000478188 LACTBP83111 547 aaPredicted RBP5.11□□□□□ -1.59
POLR2B-208ENST00000478188 ARMC5Q96C12 935 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 DYNLL2Q96FJ2 89 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 CRNKL1Q9BZJ0 848 aaKnown RBP5.11□□□□□ -1.59
POLR2B-208ENST00000478188 SERPINB13Q9UIV8 391 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.11□□□□□ -1.59
POLR2B-208ENST00000478188 A0A0D9SFI3 127 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 GPAA1O43292 621 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 BACE1P56817 501 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 TAF1CQ15572 869 aaPredicted RBP5.11□□□□□ -1.59
POLR2B-208ENST00000478188 LBX2Q6XYB7 198 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 CHD1LQ86WJ1 897 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 ACER1Q8TDN7 264 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 TRIM47Q96LD4 638 aa5.11□□□□□ -1.59
POLR2B-208ENST00000478188 BEGAINQ9BUH8 593 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms