RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 LACRTQ9GZZ8 138 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 FAM107BQ9H098 131 aa8.96□□□□□ -0.98
TPM3-215ENST00000469717 FAM217BQ9NTX9 383 aaPredicted RBP8.96□□□□□ -0.98
TPM3-215ENST00000469717 TTF2Q9UNY4 1162 aaKnown RBP8.96□□□□□ -0.98
TPM3-215ENST00000469717 MED1Q15648 1581 aaPredicted RBP8.95□□□□□ -0.98
TPM3-215ENST00000469717 FRMD3A2A2Y4 597 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 DIS3L2Q8IYB7 885 aaKnown RBP8.95□□□□□ -0.98
TPM3-215ENST00000469717 ZKSCAN3Q9BRR0 538 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 CENPHQ9H3R5 247 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 ADAMTS13Q76LX8 1427 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 ZNF213O14771 459 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 EIF3HO15372 352 aaKnown RBP eCLIP8.95□□□□□ -0.98
TPM3-215ENST00000469717 IARSP41252 1262 aaKnown RBP8.95□□□□□ -0.98
TPM3-215ENST00000469717 CUL4BQ13620 913 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 NTRK3Q16288 839 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 NFXL1Q6ZNB6 911 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 EGFL6Q8IUX8 553 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 CAGE1Q8TC20 777 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.95□□□□□ -0.98
TPM3-215ENST00000469717 MYH10P35580 1976 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 MACROD2A1Z1Q3 448 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 KRT14P02533 472 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 SSBP05455 408 aaKnown RBP eCLIP8.95□□□□□ -0.98
TPM3-215ENST00000469717 PDE6BP35913 854 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 HERVK_113P62684 666 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 TTMPQ5BVD1 217 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 NOSTRINQ8IVI9 506 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 DONSONQ9NYP3 566 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 VPS54Q9P1Q0 977 aa8.95□□□□□ -0.98
TPM3-215ENST00000469717 MYH13Q9UKX3 1938 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 NDUFAB1O14561 156 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 GPAA1O43292 621 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 CXCR5P32302 372 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 ZAP70P43403 619 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 SEC24CP53992 1094 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 CYP27A1Q02318 531 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 CCDC122Q5T0U0 273 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 NT5DC1Q5TFE4 455 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 SPATA1Q5VX52 437 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 ANKRD18AQ8IVF6 992 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 JAKMIP2Q96AA8 810 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 ZNF496Q96IT1 587 aaPredicted RBP8.94□□□□□ -0.98
TPM3-215ENST00000469717 ANGEL1Q9UNK9 670 aaKnown RBP8.94□□□□□ -0.98
TPM3-215ENST00000469717 SAR1BQ9Y6B6 198 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 EPN1Q9Y6I3 576 aaPredicted RBP8.94□□□□□ -0.98
TPM3-215ENST00000469717 NDUFA10O95299 355 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 PTPREP23469 700 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 FAM98CQ17RN3 349 aaKnown RBP8.94□□□□□ -0.98
TPM3-215ENST00000469717 NBPF20Q3BBV1 942 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 EARS2Q5JPH6 523 aaKnown RBP8.94□□□□□ -0.98
TPM3-215ENST00000469717 CDKAL1Q5VV42 579 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 CCNI2Q6ZMN8 369 aaPredicted RBP8.94□□□□□ -0.98
TPM3-215ENST00000469717 CNGA4Q8IV77 575 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 CTCFLQ8NI51 663 aaPredicted RBP8.94□□□□□ -0.98
TPM3-215ENST00000469717 VIPAS39Q9H9C1 493 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 TTC26A0AVF1 554 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 GOLGA8AA7E2F4 631 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 PPP1R3GB7ZBB8 358 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 BACH1O14867 736 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 FNTAP49354 379 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 GUCY1A3Q02108 690 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 TRIM29Q14134 588 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 RABL6Q3YEC7 729 aaPredicted RBP8.94□□□□□ -0.98
TPM3-215ENST00000469717 LRRC1Q9BTT6 524 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 NAA15Q9BXJ9 866 aaKnown RBP8.94□□□□□ -0.98
TPM3-215ENST00000469717 CABP5Q9NP86 173 aa8.94□□□□□ -0.98
TPM3-215ENST00000469717 DIP2BQ9P265 1576 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 MYO1BO43795 1136 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 SPRED3Q2MJR0 410 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 JADE2Q9NQC1 790 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 RFX7Q2KHR2 1363 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 HEG1Q9ULI3 1381 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 C4AP0C0L4 1744 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 C4BP0C0L5 1744 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 SHTN1A0MZ66 631 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 TRIM49BA6NDI0 452 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 ZSCAN5CA6NGD5 496 aaPredicted RBP8.93□□□□□ -0.98
TPM3-215ENST00000469717 ZPR1O75312 459 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 GBP6Q6ZN66 633 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 PRPF38AQ8NAV1 312 aaKnown RBP8.93□□□□□ -0.98
TPM3-215ENST00000469717 IP6K1Q92551 441 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 SLC24A3Q9HC58 644 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 TMOD3Q9NYL9 352 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 KLK7P49862 253 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 FOXO4P98177 505 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 SF3A3Q12874 501 aaKnown RBP eCLIP8.93□□□□□ -0.98
TPM3-215ENST00000469717 PPFIA1Q13136 1202 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 RNF187Q5TA31 235 aaPredicted RBP8.93□□□□□ -0.98
TPM3-215ENST00000469717 ZNF790Q6PG37 636 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 CYP26C1Q6V0L0 522 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 TMTC1Q8IUR5 882 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 ZKSCAN4Q969J2 545 aaPredicted RBP8.93□□□□□ -0.98
TPM3-215ENST00000469717 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 TACC3Q9Y6A5 838 aa8.93□□□□□ -0.98
TPM3-215ENST00000469717 ESYT3A0FGR9 886 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 SH2B2O14492 632 aaPredicted RBP8.92□□□□□ -0.98
TPM3-215ENST00000469717 ZBTB43O43298 467 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 GPTP24298 496 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 KRT26Q7Z3Y9 468 aa8.92□□□□□ -0.98
TPM3-215ENST00000469717 SHISA4Q96DD7 197 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms