RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 MS4A4AQ96JQ5 239 aa19.17■□□□□ 0.66
HLA-C-205ENST00000466892 ALDH8A1Q9H2A2 487 aaPredicted RBP19.17■□□□□ 0.66
HLA-C-205ENST00000466892 VCPKMTQ9H867 229 aa19.17■□□□□ 0.66
HLA-C-205ENST00000466892 ZCCHC17Q9NP64 241 aaKnown RBP19.17■□□□□ 0.66
HLA-C-205ENST00000466892 TMOD4Q9NZQ9 345 aa19.17■□□□□ 0.66
HLA-C-205ENST00000466892 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.17■□□□□ 0.66
HLA-C-205ENST00000466892 SH2B2O14492 632 aaPredicted RBP19.16■□□□□ 0.66
HLA-C-205ENST00000466892 CYP4F22Q6NT55 531 aa19.16■□□□□ 0.66
HLA-C-205ENST00000466892 CCDC84Q86UT8 332 aaPredicted RBP19.16■□□□□ 0.66
HLA-C-205ENST00000466892 SGMS1Q86VZ5 419 aa19.16■□□□□ 0.66
HLA-C-205ENST00000466892 NKX2-3Q8TAU0 364 aa19.16■□□□□ 0.66
HLA-C-205ENST00000466892 ACER1Q8TDN7 264 aa19.16■□□□□ 0.66
HLA-C-205ENST00000466892 TMEM47Q9BQJ4 181 aa19.16■□□□□ 0.66
HLA-C-205ENST00000466892 AGXT2Q9BYV1 514 aa19.16■□□□□ 0.66
HLA-C-205ENST00000466892 KAT14Q9H8E8 782 aa19.16■□□□□ 0.66
HLA-C-205ENST00000466892 SLC45A1Q9Y2W3 748 aa19.16■□□□□ 0.66
HLA-C-205ENST00000466892 WDR33Q9C0J8 1336 aaKnown RBP19.16■□□□□ 0.66
HLA-C-205ENST00000466892 RCAN1P53805 252 aa19.15■□□□□ 0.66
HLA-C-205ENST00000466892 ATP2B2Q01814 1243 aa19.15■□□□□ 0.66
HLA-C-205ENST00000466892 PABPC4Q13310 644 aaKnown RBP eCLIP19.15■□□□□ 0.66
HLA-C-205ENST00000466892 CLEC10AQ8IUN9 316 aa19.15■□□□□ 0.66
HLA-C-205ENST00000466892 GMCL1Q96IK5 515 aa19.15■□□□□ 0.66
HLA-C-205ENST00000466892 ZKSCAN3Q9BRR0 538 aa19.15■□□□□ 0.66
HLA-C-205ENST00000466892 LY9Q9HBG7 655 aa19.15■□□□□ 0.66
HLA-C-205ENST00000466892 ATAD5Q96QE3 1844 aa19.14■□□□□ 0.65
HLA-C-205ENST00000466892 MYH8P13535 1937 aa19.14■□□□□ 0.65
HLA-C-205ENST00000466892 WDR46O15213 610 aaKnown RBP19.14■□□□□ 0.65
HLA-C-205ENST00000466892 HMGCS2P54868 508 aa19.14■□□□□ 0.65
HLA-C-205ENST00000466892 FGD1P98174 961 aa19.14■□□□□ 0.65
HLA-C-205ENST00000466892 RABEP1Q15276 862 aa19.14■□□□□ 0.65
HLA-C-205ENST00000466892 ANKRD1Q15327 319 aa19.14■□□□□ 0.65
HLA-C-205ENST00000466892 OTUD7BQ6GQQ9 843 aa19.14■□□□□ 0.65
HLA-C-205ENST00000466892 PNMA1Q8ND90 353 aa19.14■□□□□ 0.65
HLA-C-205ENST00000466892 AGTPBP1Q9UPW5 1226 aa19.14■□□□□ 0.65
HLA-C-205ENST00000466892 CCL15-CCL14A0A0B4J2E2 113 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 F5H6K3 240 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 CALM1P0DP23 149 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 CALM2P0DP24 149 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 CALM3P0DP25 149 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 TM4SF4P48230 202 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 VEGFBP49765 207 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 KLRC3Q07444 240 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 CCL15Q16663 113 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 CHST3Q7LGC8 479 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 ANKRD23Q86SG2 305 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 MAP3K14Q99558 947 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 KIF2CQ99661 725 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 EMILIN3Q9NT22 766 aa19.13■□□□□ 0.65
HLA-C-205ENST00000466892 CCDC69A6NI79 296 aa19.12■□□□□ 0.65
HLA-C-205ENST00000466892 DDAH1O94760 285 aa19.12■□□□□ 0.65
HLA-C-205ENST00000466892 ALDH1A1P00352 501 aa19.12■□□□□ 0.65
HLA-C-205ENST00000466892 SNHG28P0DPA3 235 aa19.12■□□□□ 0.65
HLA-C-205ENST00000466892 VCAM1P19320 739 aa19.12■□□□□ 0.65
HLA-C-205ENST00000466892 HOXA7P31268 230 aaPredicted RBP19.12■□□□□ 0.65
HLA-C-205ENST00000466892 EVCP57679 992 aa19.12■□□□□ 0.65
HLA-C-205ENST00000466892 MOGSQ13724 837 aa19.12■□□□□ 0.65
HLA-C-205ENST00000466892 CATIPQ7Z7H3 387 aa19.12■□□□□ 0.65
HLA-C-205ENST00000466892 LRRC47Q8N1G4 583 aaKnown RBP19.12■□□□□ 0.65
HLA-C-205ENST00000466892 DCAF4Q8WV16 495 aa19.12■□□□□ 0.65
HLA-C-205ENST00000466892 BRI3BPQ8WY22 251 aa19.12■□□□□ 0.65
HLA-C-205ENST00000466892 UPF3BQ9BZI7 483 aaKnown RBP19.12■□□□□ 0.65
HLA-C-205ENST00000466892 PDRG1Q9NUG6 133 aa19.12■□□□□ 0.65
HLA-C-205ENST00000466892 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.12■□□□□ 0.65
HLA-C-205ENST00000466892 THSD7BQ9C0I4 1608 aa19.11■□□□□ 0.65
HLA-C-205ENST00000466892 NDUFB10O96000 172 aa19.11■□□□□ 0.65
HLA-C-205ENST00000466892 KIF23Q02241 960 aaPredicted RBP19.11■□□□□ 0.65
HLA-C-205ENST00000466892 PPP2R5BQ15173 497 aa19.11■□□□□ 0.65
HLA-C-205ENST00000466892 GPATCH4Q5T3I0 446 aaKnown RBP19.11■□□□□ 0.65
HLA-C-205ENST00000466892 SLFN13Q68D06 897 aa19.11■□□□□ 0.65
HLA-C-205ENST00000466892 NFXL1Q6ZNB6 911 aa19.11■□□□□ 0.65
HLA-C-205ENST00000466892 Q6ZUG5 572 aa19.11■□□□□ 0.65
HLA-C-205ENST00000466892 PNMA3Q9UL41 463 aa19.11■□□□□ 0.65
HLA-C-205ENST00000466892 PHIPQ8WWQ0 1821 aa19.11■□□□□ 0.65
HLA-C-205ENST00000466892 MYPNQ86TC9 1320 aa19.1■□□□□ 0.65
HLA-C-205ENST00000466892 PLA2G6O60733 806 aa19.1■□□□□ 0.65
HLA-C-205ENST00000466892 SLC1A4P43007 532 aa19.1■□□□□ 0.65
HLA-C-205ENST00000466892 NEK4P51957 841 aa19.1■□□□□ 0.65
HLA-C-205ENST00000466892 HTRA3P83110 453 aa19.1■□□□□ 0.65
HLA-C-205ENST00000466892 MKRN3Q13064 507 aaKnown RBP19.1■□□□□ 0.65
HLA-C-205ENST00000466892 COL9A3Q14050 684 aaPredicted RBP19.1■□□□□ 0.65
HLA-C-205ENST00000466892 SYNE3Q6ZMZ3 975 aa19.1■□□□□ 0.65
HLA-C-205ENST00000466892 SLC12A7Q9Y666 1083 aa19.1■□□□□ 0.65
HLA-C-205ENST00000466892 USP17L15C9J2P7 530 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 USP17L13C9JLJ4 530 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 USP17L11C9JVI0 530 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 USP17L18D6R9N7 530 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 USP17L22D6RA61 530 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 USP17L17D6RBQ6 530 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 USP17L19D6RCP7 530 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 USP17L20D6RJB6 530 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 PDHBP11177 359 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 CPA1P15085 419 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 USP17L24Q0WX57 530 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 TROAPQ12815 778 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 ZYXQ15942 572 aaKnown RBP19.09■□□□□ 0.65
HLA-C-205ENST00000466892 ASPRV1Q53RT3 343 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 GPAT2Q6NUI2 795 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 GADL1Q6ZQY3 521 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 IFNL1Q8IU54 200 aa19.09■□□□□ 0.65
HLA-C-205ENST00000466892 ZNF654Q8IZM8 581 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms