RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 SHROOM1Q2M3G4 852 aaPredicted RBP11.36□□□□□ -0.59
ABCF3-205ENST00000466416 C16orf59Q7L2K0 433 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 ALYREFQ86V81 257 aaKnown RBP11.36□□□□□ -0.59
ABCF3-205ENST00000466416 ABRAQ8N0Z2 381 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 SPATA5Q8NB90 893 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 XAGE2Q96GT9 111 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 TSEN34Q9BSV6 310 aaKnown RBP11.36□□□□□ -0.59
ABCF3-205ENST00000466416 MOV10L1Q9BXT6 1211 aaKnown RBP11.36□□□□□ -0.59
ABCF3-205ENST00000466416 SLC28A3Q9HAS3 691 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 HOXC10Q9NYD6 342 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 HMG20BQ9P0W2 317 aa11.36□□□□□ -0.59
ABCF3-205ENST00000466416 MUC6Q6W4X9 2439 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 ERC2O15083 957 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 GH2P01242 217 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 HLA-DOAP06340 250 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 COG2Q14746 738 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 ZYXQ15942 572 aaKnown RBP11.35□□□□□ -0.59
ABCF3-205ENST00000466416 PSRC1Q6PGN9 363 aaPredicted RBP11.35□□□□□ -0.59
ABCF3-205ENST00000466416 TBC1D9Q6ZT07 1266 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 TMEM199Q8N511 208 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 TGFBRAP1Q8WUH2 860 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 NUP133Q8WUM0 1156 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 HERVK_113Q902F9 699 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 MROH8Q9H579 483 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 COPRSQ9NQ92 184 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 TBX21Q9UL17 535 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 PALD1Q9ULE6 856 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 HDAC5Q9UQL6 1122 aa11.35□□□□□ -0.59
ABCF3-205ENST00000466416 A0A1B0GUL7 405 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 PGK1P00558 417 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 ERCC3P19447 782 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 TFF2Q03403 129 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 ZNF365Q70YC5 407 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 MAPKAPK5Q8IW41 473 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
ABCF3-205ENST00000466416 MAML3Q96JK9 1138 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 SPATC1LQ9H0A9 340 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 MTIF3Q9H2K0 278 aaKnown RBP11.34□□□□□ -0.59
ABCF3-205ENST00000466416 RPAP3Q9H6T3 665 aaPredicted RBP11.34□□□□□ -0.59
ABCF3-205ENST00000466416 STARD7Q9NQZ5 370 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 AATFQ9NY61 560 aaKnown RBP eCLIP11.34□□□□□ -0.59
ABCF3-205ENST00000466416 LRP2BPQ9P2M1 347 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 TCF20Q9UGU0 1960 aaKnown RBP11.34□□□□□ -0.59
ABCF3-205ENST00000466416 FLT1P17948 1338 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 MROH7Q68CQ1 1323 aa11.34□□□□□ -0.59
ABCF3-205ENST00000466416 MOXD2PA6NHM9 499 aa11.33□□□□□ -0.6
ABCF3-205ENST00000466416 UBTFL1P0CB47 393 aaPredicted RBP11.33□□□□□ -0.6
ABCF3-205ENST00000466416 KCNQ1P51787 676 aa11.33□□□□□ -0.6
ABCF3-205ENST00000466416 TATDN1Q6P1N9 297 aa11.33□□□□□ -0.6
ABCF3-205ENST00000466416 MB21D1Q8N884 522 aa11.33□□□□□ -0.6
ABCF3-205ENST00000466416 SNX27Q96L92 541 aa11.33□□□□□ -0.6
ABCF3-205ENST00000466416 NKX2-4Q9H2Z4 354 aa11.33□□□□□ -0.6
ABCF3-205ENST00000466416 PA2G4Q9UQ80 394 aaKnown RBP11.33□□□□□ -0.6
ABCF3-205ENST00000466416 SALL2Q9Y467 1007 aaPredicted RBP11.33□□□□□ -0.6
ABCF3-205ENST00000466416 ZNF521Q96K83 1311 aa11.33□□□□□ -0.6
ABCF3-205ENST00000466416 IGSF3O75054 1194 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 FCER1AP12319 257 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 CSF2RAP15509 400 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 ACLYP53396 1101 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 RAB3GAP1Q15042 981 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 SKIV2LQ15477 1246 aaKnown RBP11.32□□□□□ -0.6
ABCF3-205ENST00000466416 GORABQ5T7V8 394 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 NAA16Q6N069 864 aaPredicted RBP11.32□□□□□ -0.6
ABCF3-205ENST00000466416 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 NEUROD6Q96NK8 337 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 CABP5Q9NP86 173 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 COG5Q9UP83 839 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 ELP1O95163 1332 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 PLXNA1Q9UIW2 1896 aa11.32□□□□□ -0.6
ABCF3-205ENST00000466416 ZNF236Q9UL36 1845 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 TLL1O43897 1013 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 ADAMTS4O75173 837 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 FGBP02675 491 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 ACRP10323 421 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 AKR1A1P14550 325 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 POU3F3P20264 500 aaPredicted RBP11.31□□□□□ -0.6
ABCF3-205ENST00000466416 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
ABCF3-205ENST00000466416 CDK7P50613 346 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 TFCP2Q12800 502 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 CERKLQ49MI3 558 aaPredicted RBP11.31□□□□□ -0.6
ABCF3-205ENST00000466416 PI16Q6UXB8 463 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 NCAPG2Q86XI2 1143 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 MICALL1Q8N3F8 863 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 TINF2Q9BSI4 451 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 IL23AQ9NPF7 189 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 DIS3Q9Y2L1 958 aaKnown RBP11.31□□□□□ -0.6
ABCF3-205ENST00000466416 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
ABCF3-205ENST00000466416 SIPA1L1O43166 1804 aa11.3□□□□□ -0.6
ABCF3-205ENST00000466416 ROBO3Q96MS0 1386 aa11.3□□□□□ -0.6
ABCF3-205ENST00000466416 PI4K2BG5E9Z4 385 aa11.3□□□□□ -0.6
ABCF3-205ENST00000466416 UQCRFS1P1P0C7P4 283 aa11.3□□□□□ -0.6
ABCF3-205ENST00000466416 KCNA10Q16322 511 aa11.3□□□□□ -0.6
ABCF3-205ENST00000466416 KLHDC9Q8NEP7 349 aa11.3□□□□□ -0.6
ABCF3-205ENST00000466416 GLT1D1Q96MS3 346 aa11.3□□□□□ -0.6
ABCF3-205ENST00000466416 EHD4Q9H223 541 aa11.3□□□□□ -0.6
ABCF3-205ENST00000466416 C11orf16Q9NQ32 467 aa11.3□□□□□ -0.6
ABCF3-205ENST00000466416 SAP30BPQ9UHR5 308 aaKnown RBP11.3□□□□□ -0.6
ABCF3-205ENST00000466416 SERPINB13Q9UIV8 391 aa11.3□□□□□ -0.6
ABCF3-205ENST00000466416 YBX2Q9Y2T7 364 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms