RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 SIRPGQ9P1W8 387 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 ZNF214Q9UL59 606 aaPredicted RBP3□□□□□ -1.93
NUCKS1-202ENST00000464938 SLC12A7Q9Y666 1083 aa3□□□□□ -1.93
NUCKS1-202ENST00000464938 IGF2BP3O00425 579 aaKnown RBP eCLIP2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 RAB6AP20340 208 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 PMS1P54277 932 aaKnown RBP2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 CCDC144BQ3MJ40 725 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 ANKRD39Q53RE8 183 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 FBXW10Q5XX13 1052 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 LETMD1Q6P1Q0 360 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 PAOXQ6QHF9 649 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 C22orf34Q6ZV56 151 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 ZAR1Q86SH2 424 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 SHISA5Q8N114 240 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 SHKBP1Q8TBC3 707 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 HNRNPLLQ8WVV9 542 aaKnown RBP2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 KLHL6Q8WZ60 621 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 FBXL18Q96ME1 805 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 DPH2Q9BQC3 489 aaPredicted RBP2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 CCDC113Q9H0I3 377 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 PICK1Q9NRD5 415 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 ACTR10Q9NZ32 417 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 PPP1R1BQ9UD71 204 aaPredicted RBP2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 SUSD2Q9UGT4 822 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 KLHL3Q9UH77 587 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 DAGLAQ9Y4D2 1042 aa2.99□□□□□ -1.93
NUCKS1-202ENST00000464938 LOC105371045A0A1W2PR82 267 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 LEFTY1O75610 366 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 CAPNS1P04632 268 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 F13BP05160 661 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 RAG1P15918 1043 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 JUNBP17275 347 aaPredicted RBP2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 POLR2BP30876 1174 aaKnown RBP2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 CDK5R2Q13319 367 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 RASA3Q14644 834 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 FXNQ16595 210 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 DDR2Q16832 855 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 NBPF12Q5TAG4 269 aaPredicted RBP2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 PPFIBP1Q86W92 1011 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 ZNF513Q8N8E2 541 aaPredicted RBP2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 JMYQ8N9B5 988 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 ZNF669Q96BR6 464 aaPredicted RBP2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 ASIC4Q96FT7 647 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 DHRS1Q96LJ7 313 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 HEXIM2Q96MH2 286 aaKnown RBP2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 KREMEN1Q96MU8 473 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 OSBPL2Q9H1P3 480 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 PIF1Q9H611 641 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 PHAXQ9H814 394 aaKnown RBP2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 SSU72Q9NP77 194 aaKnown RBP2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 SUCOQ9UBS9 1254 aaKnown RBP2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 CCDC39Q9UFE4 941 aa2.98□□□□□ -1.93
NUCKS1-202ENST00000464938 FAM221BA6H8Z2 402 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 RBAK-RBAKDNI3L0D1 243 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 PAPLNO95428 1278 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 GJB6O95452 261 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 FAM87AP0C7U9 286 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 ZNF865P0CJ78 1059 aaPredicted RBP2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 RXRBP28702 533 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 GBP1P32455 592 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 RASGRF1Q13972 1273 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 NCAPHQ15003 741 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 NFKBIBQ15653 356 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 MRM1Q6IN84 353 aaKnown RBP2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 ZNF746Q6NUN9 644 aaPredicted RBP2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 NOP9Q86U38 636 aaKnown RBP2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 CDH24Q86UP0 819 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 CILP2Q8IUL8 1156 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 FAM178BQ8IXR5 827 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 PHACTR4Q8IZ21 702 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 TOP6BLQ8N6T0 577 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 GIMAP7Q8NHV1 300 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 RNF141Q8WVD5 230 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 SMARCC1Q92922 1105 aaPredicted RBP2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 COX4I2Q96KJ9 171 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 SLC6A18Q96N87 628 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 MIPEPQ99797 713 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 KCNF1Q9H3M0 494 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 LGR6Q9HBX8 967 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 CADPSQ9ULU8 1353 aa2.97□□□□□ -1.93
NUCKS1-202ENST00000464938 A0A087WZG4 1122 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 FAM170BA6NMN3 283 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 DBX1A6NMT0 343 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 C9IYK1 514 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 SHOXO15266 292 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 CBFA2T2O43439 604 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 CLEC3AO75596 197 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 SRFP11831 508 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 ETV3P41162 512 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 ZNF143P52747 638 aaPredicted RBP2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 OXCT1P55809 520 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 SLC7A5Q01650 507 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 CYP27A1Q02318 531 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 NFE2L2Q16236 605 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 PPP2R5EQ16537 467 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 CPSF6Q16630 551 aaKnown RBP eCLIP2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 NBPF9Q3BBW0 867 aa2.96□□□□□ -1.94
NUCKS1-202ENST00000464938 BBS9Q3SYG4 887 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms