RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 ROBO3Q96MS0 1386 aa13.58□□□□□ -0.24
SSR3-202ENST00000463503 PNMA6EA0A0J9YXQ4 647 aa13.57□□□□□ -0.24
SSR3-202ENST00000463503 SPDYE16A6NNV3 312 aaPredicted RBP13.57□□□□□ -0.24
SSR3-202ENST00000463503 SEPT4O43236 478 aa13.57□□□□□ -0.24
SSR3-202ENST00000463503 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
SSR3-202ENST00000463503 VCAM1P19320 739 aa13.57□□□□□ -0.24
SSR3-202ENST00000463503 ARID4AP29374 1257 aaPredicted RBP13.57□□□□□ -0.24
SSR3-202ENST00000463503 ADCYAP1R1P41586 468 aa13.57□□□□□ -0.24
SSR3-202ENST00000463503 IRX6P78412 446 aaPredicted RBP13.57□□□□□ -0.24
SSR3-202ENST00000463503 TLE2Q04725 743 aa13.57□□□□□ -0.24
SSR3-202ENST00000463503 LRRC41Q15345 812 aa13.57□□□□□ -0.24
SSR3-202ENST00000463503 FAM47AQ5JRC9 791 aa13.57□□□□□ -0.24
SSR3-202ENST00000463503 WDR78Q5VTH9 848 aa13.57□□□□□ -0.24
SSR3-202ENST00000463503 ATXN2LQ8WWM7 1075 aaKnown RBP13.57□□□□□ -0.24
SSR3-202ENST00000463503 FAM122AQ96E09 287 aa13.57□□□□□ -0.24
SSR3-202ENST00000463503 AATFQ9NY61 560 aaKnown RBP eCLIP13.57□□□□□ -0.24
SSR3-202ENST00000463503 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
SSR3-202ENST00000463503 USP17L15C9J2P7 530 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 USP17L13C9JLJ4 530 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 USP17L11C9JVI0 530 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 USP17L18D6R9N7 530 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 USP17L22D6RA61 530 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 USP17L17D6RBQ6 530 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 USP17L19D6RCP7 530 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 USP17L20D6RJB6 530 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 KIAA0355O15063 1070 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 GH2P01242 217 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 CLTBP09497 229 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 MCAMP43121 646 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 USP17L24Q0WX57 530 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 TFCP2Q12800 502 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 MAP3K12Q12852 859 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 ZYXQ15942 572 aaKnown RBP13.56□□□□□ -0.24
SSR3-202ENST00000463503 CATSPERGQ6ZRH7 1159 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 MAPKAPK5Q8IW41 473 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 FERMT2Q96AC1 680 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 ASB2Q96Q27 587 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 ZNF576Q9H609 170 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 RAI14Q9P0K7 980 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 THEGQ9P2T0 379 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 PALD1Q9ULE6 856 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 IVNS1ABPQ9Y6Y0 642 aa13.56□□□□□ -0.24
SSR3-202ENST00000463503 MUC6Q6W4X9 2439 aa13.55□□□□□ -0.24
SSR3-202ENST00000463503 ADORA2AP29274 412 aa13.55□□□□□ -0.24
SSR3-202ENST00000463503 FOXP4Q8IVH2 680 aaPredicted RBP13.55□□□□□ -0.24
SSR3-202ENST00000463503 CRACR2BQ8N4Y2 399 aaPredicted RBP13.55□□□□□ -0.24
SSR3-202ENST00000463503 TGFBRAP1Q8WUH2 860 aa13.55□□□□□ -0.24
SSR3-202ENST00000463503 TIFAQ96CG3 184 aa13.55□□□□□ -0.24
SSR3-202ENST00000463503 PHF24Q9UPV7 400 aa13.55□□□□□ -0.24
SSR3-202ENST00000463503 WDFY4Q6ZS81 3184 aa13.55□□□□□ -0.24
SSR3-202ENST00000463503 COBLO75128 1261 aa13.54□□□□□ -0.24
SSR3-202ENST00000463503 PPP4CP60510 307 aa13.54□□□□□ -0.24
SSR3-202ENST00000463503 FPGSQ05932 587 aa13.54□□□□□ -0.24
SSR3-202ENST00000463503 HSP90AB4PQ58FF6 505 aa13.54□□□□□ -0.24
SSR3-202ENST00000463503 AKNAD1Q5T1N1 836 aa13.54□□□□□ -0.24
SSR3-202ENST00000463503 UHRF1Q96T88 793 aaPredicted RBP13.54□□□□□ -0.24
SSR3-202ENST00000463503 FEZ1Q99689 392 aa13.54□□□□□ -0.24
SSR3-202ENST00000463503 MOV10L1Q9BXT6 1211 aaKnown RBP13.54□□□□□ -0.24
SSR3-202ENST00000463503 KIAA1683Q9H0B3 1180 aa13.54□□□□□ -0.24
SSR3-202ENST00000463503 DCTPP1Q9H773 170 aa13.54□□□□□ -0.24
SSR3-202ENST00000463503 TACC3Q9Y6A5 838 aa13.54□□□□□ -0.24
SSR3-202ENST00000463503 BAZ2AQ9UIF9 1905 aaKnown RBP13.53□□□□□ -0.24
SSR3-202ENST00000463503 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.53□□□□□ -0.24
SSR3-202ENST00000463503 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.53□□□□□ -0.24
SSR3-202ENST00000463503 PBX2P40425 430 aa13.53□□□□□ -0.24
SSR3-202ENST00000463503 ADGRE1Q14246 886 aa13.53□□□□□ -0.24
SSR3-202ENST00000463503 TATDN1Q6P1N9 297 aa13.53□□□□□ -0.24
SSR3-202ENST00000463503 ACER1Q8TDN7 264 aa13.53□□□□□ -0.24
SSR3-202ENST00000463503 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
SSR3-202ENST00000463503 SAP30BPQ9UHR5 308 aaKnown RBP13.53□□□□□ -0.24
SSR3-202ENST00000463503 AKAP2Q9Y2D5 859 aa13.53□□□□□ -0.24
SSR3-202ENST00000463503 COL4A4P53420 1690 aaPredicted RBP13.53□□□□□ -0.24
SSR3-202ENST00000463503 PRRC2BQ5JSZ5 2229 aaKnown RBP13.52□□□□□ -0.24
SSR3-202ENST00000463503 BRWD1Q9NSI6 2320 aa13.52□□□□□ -0.24
SSR3-202ENST00000463503 A0A1W2PQ45 241 aaPredicted RBP13.52□□□□□ -0.25
SSR3-202ENST00000463503 A0A1W2PQY0 241 aa13.52□□□□□ -0.25
SSR3-202ENST00000463503 PQBP1O60828 265 aaKnown RBP13.52□□□□□ -0.25
SSR3-202ENST00000463503 RAB11FIP3O75154 756 aa13.52□□□□□ -0.25
SSR3-202ENST00000463503 MYCNP04198 464 aaPredicted RBP13.52□□□□□ -0.25
SSR3-202ENST00000463503 RAG1P15918 1043 aa13.52□□□□□ -0.25
SSR3-202ENST00000463503 PLCG2P16885 1265 aa13.52□□□□□ -0.25
SSR3-202ENST00000463503 USP14P54578 494 aa13.52□□□□□ -0.25
SSR3-202ENST00000463503 PRAMEF19Q5SWL8 479 aa13.52□□□□□ -0.25
SSR3-202ENST00000463503 RASIP1Q5U651 963 aa13.52□□□□□ -0.25
SSR3-202ENST00000463503 NAA16Q6N069 864 aaPredicted RBP13.52□□□□□ -0.25
SSR3-202ENST00000463503 DPP9Q86TI2 863 aa13.52□□□□□ -0.25
SSR3-202ENST00000463503 TRIM34Q9BYJ4 488 aa13.52□□□□□ -0.25
SSR3-202ENST00000463503 PBX4Q9BYU1 374 aa13.52□□□□□ -0.25
SSR3-202ENST00000463503 RPAP3Q9H6T3 665 aaPredicted RBP13.52□□□□□ -0.25
SSR3-202ENST00000463503 SYNGAP1Q96PV0 1343 aa13.52□□□□□ -0.25
SSR3-202ENST00000463503 BAG3O95817 575 aa13.51□□□□□ -0.25
SSR3-202ENST00000463503 FAAP100Q0VG06 881 aa13.51□□□□□ -0.25
SSR3-202ENST00000463503 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
SSR3-202ENST00000463503 SHCBP1Q8NEM2 672 aa13.51□□□□□ -0.25
SSR3-202ENST00000463503 PPM1EQ8WY54 764 aa13.51□□□□□ -0.25
SSR3-202ENST00000463503 MAML3Q96JK9 1138 aa13.51□□□□□ -0.25
SSR3-202ENST00000463503 NEUROD6Q96NK8 337 aa13.51□□□□□ -0.25
SSR3-202ENST00000463503 GAS2L1Q99501 681 aaPredicted RBP13.51□□□□□ -0.25
SSR3-202ENST00000463503 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.51□□□□□ -0.254e-7■□□□□ 9.2
SSR3-202ENST00000463503 NOL10Q9BSC4 688 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms