RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SLC39A14Q15043 492 aa14.28□□□□□ -0.12
COL4A6-204ENST00000461897 SF3A1Q15459 793 aaKnown RBP14.28□□□□□ -0.12
COL4A6-204ENST00000461897 DPCR1Q3MIW9 517 aa14.28□□□□□ -0.12
COL4A6-204ENST00000461897 CCDC93Q567U6 631 aa14.28□□□□□ -0.12
COL4A6-204ENST00000461897 SYNE3Q6ZMZ3 975 aa14.28□□□□□ -0.12
COL4A6-204ENST00000461897 SLC44A5Q8NCS7 719 aa14.28□□□□□ -0.12
COL4A6-204ENST00000461897 SUPT20HQ8NEM7 779 aa14.28□□□□□ -0.12
COL4A6-204ENST00000461897 PHKBQ93100 1093 aa14.28□□□□□ -0.12
COL4A6-204ENST00000461897 YDJCA8MPS7 323 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 KIF28PB7ZC32 967 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 PPIP5K2O43314 1243 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 ZNF202O95125 648 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 POLR3DP05423 398 aaPredicted RBP14.27□□□□□ -0.12
COL4A6-204ENST00000461897 NCAPHQ15003 741 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 RTN1Q16799 776 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 IFIT1BQ5T764 474 aaKnown RBP14.27□□□□□ -0.12
COL4A6-204ENST00000461897 HHIPL2Q6UWX4 724 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 AMOTL1Q8IY63 956 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 TEKT1Q969V4 418 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 AIFM3Q96NN9 605 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 MTFR1LQ9H019 292 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 OGFRQ9NZT2 677 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 TUBE1Q9UJT0 475 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 HPSEQ9Y251 543 aa14.27□□□□□ -0.12
COL4A6-204ENST00000461897 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.12
COL4A6-204ENST00000461897 PSDA5PKW4 1024 aaPredicted RBP14.27□□□□□ -0.13
COL4A6-204ENST00000461897 USP17L3A6NCW0 530 aa14.27□□□□□ -0.13
COL4A6-204ENST00000461897 USP17L4A6NCW7 530 aa14.27□□□□□ -0.13
COL4A6-204ENST00000461897 TSPY2A6NKD2 308 aa14.27□□□□□ -0.13
COL4A6-204ENST00000461897 PPP6R2O75170 966 aa14.27□□□□□ -0.13
COL4A6-204ENST00000461897 WDHD1O75717 1129 aaPredicted RBP14.27□□□□□ -0.13
COL4A6-204ENST00000461897 GRIPAP1Q4V328 841 aa14.27□□□□□ -0.13
COL4A6-204ENST00000461897 OTUD7BQ6GQQ9 843 aa14.27□□□□□ -0.13
COL4A6-204ENST00000461897 APOBEC3HQ6NTF7 200 aaKnown RBP14.27□□□□□ -0.13
COL4A6-204ENST00000461897 CPLX2Q6PUV4 134 aaKnown RBP14.27□□□□□ -0.13
COL4A6-204ENST00000461897 USP17L1Q7RTZ2 530 aa14.27□□□□□ -0.13
COL4A6-204ENST00000461897 FILIP1Q7Z7B0 1213 aa14.27□□□□□ -0.13
COL4A6-204ENST00000461897 PSMD1Q99460 953 aa14.27□□□□□ -0.13
COL4A6-204ENST00000461897 ARID3AQ99856 593 aa14.27□□□□□ -0.13
COL4A6-204ENST00000461897 GJB4Q9NTQ9 266 aa14.27□□□□□ -0.13
COL4A6-204ENST00000461897 A0A087WWV3 80 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 UBE2Q2LH0YL09 131 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 MYO1BO43795 1136 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 IFNAR1P17181 557 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 CRKP46108 304 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 CBX1P83916 185 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 RCSD1Q6JBY9 416 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 KIAA0825Q8IV33 1275 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 ELOA2Q8IYF1 753 aaPredicted RBP14.26□□□□□ -0.13
COL4A6-204ENST00000461897 RTKN2Q8IZC4 609 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 FANCBQ8NB91 859 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 NUP133Q8WUM0 1156 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 DDX4Q9NQI0 724 aaKnown RBP14.26□□□□□ -0.13
COL4A6-204ENST00000461897 STK36Q9NRP7 1315 aa14.26□□□□□ -0.13
COL4A6-204ENST00000461897 PFKFB1P16118 471 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 U2AF2P26368 475 aaKnown RBP eCLIP14.25□□□□□ -0.13
COL4A6-204ENST00000461897 NT5C2P49902 561 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 TPM4P67936 248 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 TFAP4Q01664 338 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 TROAPQ12815 778 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 R3HDM1Q15032 1099 aaKnown RBP14.25□□□□□ -0.13
COL4A6-204ENST00000461897 ZRSR1Q15695 479 aaKnown RBP14.25□□□□□ -0.13
COL4A6-204ENST00000461897 CDC42EP5Q6NZY7 148 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 C16orf86Q6ZW13 317 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 ERO1AQ96HE7 468 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 L2HGDHQ9H9P8 463 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 IL17RBQ9NRM6 502 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 DDX41Q9UJV9 622 aaKnown RBP14.25□□□□□ -0.13
COL4A6-204ENST00000461897 PCDHAC2Q9Y5I4 1007 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 FMNL1O95466 1100 aaPredicted RBP14.25□□□□□ -0.13
COL4A6-204ENST00000461897 RASA1P20936 1047 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 IARSP41252 1262 aaKnown RBP14.25□□□□□ -0.13
COL4A6-204ENST00000461897 TGFB2P61812 414 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 PICALMQ13492 652 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 PTPAQ15257 358 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 JMYQ8N9B5 988 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 KIF18AQ8NI77 898 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 ZDHHC15Q96MV8 337 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 ALG1Q9BT22 464 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 SLC26A6Q9BXS9 759 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 XPO4Q9C0E2 1151 aaKnown RBP14.25□□□□□ -0.13
COL4A6-204ENST00000461897 MKNK2Q9HBH9 465 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.25□□□□□ -0.13
COL4A6-204ENST00000461897 USP40Q9NVE5 1235 aa14.25□□□□□ -0.13
COL4A6-204ENST00000461897 DDAH1O94760 285 aa14.24□□□□□ -0.13
COL4A6-204ENST00000461897 POLD1P28340 1107 aa14.24□□□□□ -0.13
COL4A6-204ENST00000461897 E4F1Q66K89 784 aaPredicted RBP14.24□□□□□ -0.13
COL4A6-204ENST00000461897 ARMCX5Q6P1M9 558 aa14.24□□□□□ -0.13
COL4A6-204ENST00000461897 CATIPQ7Z7H3 387 aa14.24□□□□□ -0.13
COL4A6-204ENST00000461897 CMTR1Q8N1G2 835 aaKnown RBP14.24□□□□□ -0.13
COL4A6-204ENST00000461897 ERCC4Q92889 916 aaPredicted RBP14.24□□□□□ -0.13
COL4A6-204ENST00000461897 MRIQ9BWK5 157 aa14.24□□□□□ -0.13
COL4A6-204ENST00000461897 HSD3B7Q9H2F3 369 aa14.24□□□□□ -0.13
COL4A6-204ENST00000461897 MYH6P13533 1939 aa14.24□□□□□ -0.13
COL4A6-204ENST00000461897 CCDC196A0A1B0GTZ2 297 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 CDK8P49336 464 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 HDLBPQ00341 1268 aaKnown RBP14.23□□□□□ -0.13
COL4A6-204ENST00000461897 SSRP1Q08945 709 aaKnown RBP14.23□□□□□ -0.13
COL4A6-204ENST00000461897 ZNF397Q8NF99 534 aaPredicted RBP14.23□□□□□ -0.13
COL4A6-204ENST00000461897 MAP3K14Q99558 947 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms