RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 LCE2BO14633 110 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 CILPO75339 1184 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 VSIG8P0DPA2 414 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 CDC27P30260 824 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 HOXC9P31274 260 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 ZNF252P-AS1Q0IIN9 211 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 SERINC3Q13530 473 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 MPP2Q14168 576 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 RALBP1Q15311 655 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 HSP90AB2PQ58FF8 381 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 RASIP1Q5U651 963 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 TMED8Q6PL24 325 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-202ENST00000460925 ARHGEF25Q86VW2 580 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 USHBP1Q8N6Y0 703 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 DDX54Q8TDD1 881 aaKnown RBP6.46□□□□□ -1.38
SF3A3-202ENST00000460925 MKL1Q969V6 931 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 LTV1Q96GA3 475 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-202ENST00000460925 ZNF408Q9H9D4 720 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 PRDM11Q9NQV5 511 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 CACNA2D2Q9NY47 1150 aa6.46□□□□□ -1.38
SF3A3-202ENST00000460925 NXF1Q9UBU9 619 aaKnown RBP6.46□□□□□ -1.38
SF3A3-202ENST00000460925 FLT4P35916 1363 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 NWD2Q9ULI1 1742 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 H3BM21 787 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 H3BRJ5 948 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 LMNB1P20700 586 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 AMPHP49418 695 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 ZNF157P51786 506 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-202ENST00000460925 AP3B2Q13367 1082 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 IKBKEQ14164 716 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 GRIK5Q16478 980 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 PSAPL1Q6NUJ1 521 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 LLGL2Q6P1M3 1020 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 BNC2Q6ZN30 1099 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-202ENST00000460925 SLCO4C1Q6ZQN7 724 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 PDZD3Q86UT5 571 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 REXO1Q8N1G1 1221 aaKnown RBP6.45□□□□□ -1.38
SF3A3-202ENST00000460925 GPR161Q8N6U8 529 aaKnown RBP6.45□□□□□ -1.38
SF3A3-202ENST00000460925 GOLGA6L1Q8N7Z2 621 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 STK35Q8TDR2 534 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 WNT8BQ93098 351 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 GAL3ST3Q96A11 431 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 GDF2Q9UK05 429 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-202ENST00000460925 PCDHB5Q9Y5E4 795 aa6.45□□□□□ -1.38
SF3A3-202ENST00000460925 COL5A2P05997 1499 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-202ENST00000460925 VIRMAQ69YN4 1812 aaKnown RBP6.45□□□□□ -1.38
SF3A3-202ENST00000460925 CPDO75976 1380 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 DLG5Q8TDM6 1919 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 TLDC2A0PJX2 215 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 FAM83GA6ND36 823 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 FAM177BA6PVY3 158 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 NEURL1BA8MQ27 555 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 SOX1O00570 391 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-202ENST00000460925 KLF4O43474 513 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 TRIM37O94972 964 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 EPHA1P21709 976 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 ALAS2P22557 587 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 ETFBP38117 255 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 CABP4P57796 275 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 EIF4A2Q14240 407 aaKnown RBP6.44□□□□□ -1.38
SF3A3-202ENST00000460925 CWF19L2Q2TBE0 894 aaKnown RBP6.44□□□□□ -1.38
SF3A3-202ENST00000460925 C20orf204Q6ZNR8 217 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 REC114Q7Z4M0 266 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 KCNH5Q8NCM2 988 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 SHDQ96IW2 340 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 SRRTQ9BXP5 876 aaKnown RBP6.44□□□□□ -1.38
SF3A3-202ENST00000460925 PIF1Q9H611 641 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 ZSWIM4Q9H7M6 989 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 GGA1Q9UJY5 639 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 STARD13Q9Y3M8 1113 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 SHANK3Q9BYB0 1731 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.44□□□□□ -1.38
SF3A3-202ENST00000460925 RTL1A6NKG5 1358 aa6.44□□□□□ -1.38
SF3A3-202ENST00000460925 U2SURPO15042 1029 aaKnown RBP6.43□□□□□ -1.38
SF3A3-202ENST00000460925 RGS9O75916 674 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-202ENST00000460925 EPXP11678 715 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 ZNF165P49910 485 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 NFE2L2Q16236 605 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 SEZ6Q53EL9 994 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 MEX3CQ5U5Q3 659 aaKnown RBP6.43□□□□□ -1.38
SF3A3-202ENST00000460925 KANK3Q6NY19 840 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 FAM9BQ8IZU0 186 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 GRIN3AQ8TCU5 1115 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 IP6K1Q92551 441 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 LACRTQ9GZZ8 138 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 SH2B1Q9NRF2 756 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-202ENST00000460925 BTG4Q9NY30 223 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 SIRPGQ9P1W8 387 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 PRKAG3Q9UGI9 489 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 TMA7Q9Y2S6 64 aaKnown RBP6.43□□□□□ -1.38
SF3A3-202ENST00000460925 SLIT2O94813 1529 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 ABCC6O95255 1503 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 INSRP06213 1382 aa6.43□□□□□ -1.38
SF3A3-202ENST00000460925 BLMP54132 1417 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-202ENST00000460925 GSTP1P09211 210 aaKnown RBP6.42□□□□□ -1.38
SF3A3-202ENST00000460925 HMOX1P09601 288 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 IMPDH2P12268 514 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 BAG6P46379 1132 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 GIPRP48546 466 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 RAB33AQ14088 237 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms