RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 OLFML2BQ68BL8 750 aa16.05■□□□□ 0.16
SRRT-206ENST00000460194 FAM109BQ6ICB4 259 aaPredicted RBP16.05■□□□□ 0.16
SRRT-206ENST00000460194 RHPN1Q8TCX5 695 aa16.05■□□□□ 0.16
SRRT-206ENST00000460194 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
SRRT-206ENST00000460194 DCP1AQ9NPI6 582 aaPredicted RBP16.05■□□□□ 0.16
SRRT-206ENST00000460194 GREB1LQ9C091 1923 aaPredicted RBP16.04■□□□□ 0.16
SRRT-206ENST00000460194 STRNO43815 780 aa16.04■□□□□ 0.16
SRRT-206ENST00000460194 COBLO75128 1261 aa16.04■□□□□ 0.16
SRRT-206ENST00000460194 ADORA2AP29274 412 aa16.04■□□□□ 0.16
SRRT-206ENST00000460194 ATP2B2Q01814 1243 aa16.04■□□□□ 0.16
SRRT-206ENST00000460194 SNX17Q15036 470 aa16.04■□□□□ 0.16
SRRT-206ENST00000460194 SLC9C2Q5TAH2 1124 aa16.04■□□□□ 0.16
SRRT-206ENST00000460194 ERC1Q8IUD2 1116 aa16.04■□□□□ 0.16
SRRT-206ENST00000460194 SHCBP1Q8NEM2 672 aa16.04■□□□□ 0.16
SRRT-206ENST00000460194 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.04■□□□□ 0.16
SRRT-206ENST00000460194 GUCD1Q96NT3 240 aa16.04■□□□□ 0.16
SRRT-206ENST00000460194 SPATC1LQ9H0A9 340 aa16.04■□□□□ 0.16
SRRT-206ENST00000460194 CDH23Q9H251 3354 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 ZNF532Q9HCE3 1301 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 SMIM22K7EJ46 135 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 CYP2D6P10635 497 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 DSG3P32926 999 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 WDR78Q5VTH9 848 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 SIRT2Q8IXJ6 389 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 FTSJ3Q8IY81 847 aaKnown RBP16.03■□□□□ 0.16
SRRT-206ENST00000460194 LCORLQ8N3X6 602 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 SLC44A5Q8NCS7 719 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 SDR42E1Q8WUS8 393 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 IL1RAPL2Q9NP60 686 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 MCM9Q9NXL9 1143 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 HOXC10Q9NYD6 342 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 ADAMTS5Q9UNA0 930 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 IVNS1ABPQ9Y6Y0 642 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 PRUNE2Q8WUY3 3088 aa16.03■□□□□ 0.16
SRRT-206ENST00000460194 POLR3DP05423 398 aaPredicted RBP16.02■□□□□ 0.16
SRRT-206ENST00000460194 ERCC3P19447 782 aa16.02■□□□□ 0.16
SRRT-206ENST00000460194 TTF1Q15361 905 aaPredicted RBP16.02■□□□□ 0.16
SRRT-206ENST00000460194 ABRAQ8N0Z2 381 aa16.02■□□□□ 0.16
SRRT-206ENST00000460194 VCANP13611 3396 aa16.02■□□□□ 0.15
SRRT-206ENST00000460194 CNGA1P29973 690 aa16.01■□□□□ 0.15
SRRT-206ENST00000460194 ATN1P54259 1190 aaPredicted RBP16.01■□□□□ 0.15
SRRT-206ENST00000460194 RTP1P59025 263 aa16.01■□□□□ 0.15
SRRT-206ENST00000460194 SLFNL1Q499Z3 407 aa16.01■□□□□ 0.15
SRRT-206ENST00000460194 GJC2Q5T442 439 aaPredicted RBP16.01■□□□□ 0.15
SRRT-206ENST00000460194 C1orf53Q5VUE5 145 aa16.01■□□□□ 0.15
SRRT-206ENST00000460194 SLC39A5Q6ZMH5 540 aa16.01■□□□□ 0.15
SRRT-206ENST00000460194 TMEM179Q6ZVK1 233 aa16.01■□□□□ 0.15
SRRT-206ENST00000460194 CLEC10AQ8IUN9 316 aa16.01■□□□□ 0.15
SRRT-206ENST00000460194 PANK1Q8TE04 598 aa16.01■□□□□ 0.15
SRRT-206ENST00000460194 DYNLL2Q96FJ2 89 aa16.01■□□□□ 0.15
SRRT-206ENST00000460194 CRNKL1Q9BZJ0 848 aaKnown RBP16.01■□□□□ 0.15
SRRT-206ENST00000460194 CWC22Q9HCG8 908 aaKnown RBP16.01■□□□□ 0.15
SRRT-206ENST00000460194 TMX2Q9Y320 296 aa16.01■□□□□ 0.15
SRRT-206ENST00000460194 SEPT4O43236 478 aa16■□□□□ 0.15
SRRT-206ENST00000460194 PRKAB2O43741 272 aa16■□□□□ 0.15
SRRT-206ENST00000460194 AKR1B1P15121 316 aa16■□□□□ 0.15
SRRT-206ENST00000460194 DPP9Q86TI2 863 aa16■□□□□ 0.15
SRRT-206ENST00000460194 MB21D1Q8N884 522 aa16■□□□□ 0.15
SRRT-206ENST00000460194 MAML3Q96JK9 1138 aa16■□□□□ 0.15
SRRT-206ENST00000460194 GOLIM4O00461 696 aa15.99■□□□□ 0.15
SRRT-206ENST00000460194 CHGBP05060 677 aa15.99■□□□□ 0.15
SRRT-206ENST00000460194 ADD2P35612 726 aa15.99■□□□□ 0.15
SRRT-206ENST00000460194 PRAMEF19Q5SWL8 479 aa15.99■□□□□ 0.15
SRRT-206ENST00000460194 ARRDC4Q8NCT1 418 aa15.99■□□□□ 0.15
SRRT-206ENST00000460194 ATG4CQ96DT6 458 aa15.99■□□□□ 0.15
SRRT-206ENST00000460194 MROH8Q9H579 483 aa15.99■□□□□ 0.15
SRRT-206ENST00000460194 VCPKMTQ9H867 229 aa15.99■□□□□ 0.15
SRRT-206ENST00000460194 SWAP70Q9UH65 585 aa15.99■□□□□ 0.15
SRRT-206ENST00000460194 SPTBN5Q9NRC6 3674 aaKnown RBP15.99■□□□□ 0.15
SRRT-206ENST00000460194 ZBED9Q6R2W3 1325 aa15.98■□□□□ 0.15
SRRT-206ENST00000460194 MPHOSPH10O00566 681 aaKnown RBP15.98■□□□□ 0.15
SRRT-206ENST00000460194 TMEM132BQ14DG7 1078 aa15.98■□□□□ 0.15
SRRT-206ENST00000460194 LRRC41Q15345 812 aa15.98■□□□□ 0.15
SRRT-206ENST00000460194 SHHQ15465 462 aa15.98■□□□□ 0.15
SRRT-206ENST00000460194 HSP90AB4PQ58FF6 505 aa15.98■□□□□ 0.15
SRRT-206ENST00000460194 C12orf60Q5U649 245 aa15.98■□□□□ 0.15
SRRT-206ENST00000460194 ANO1Q5XXA6 986 aa15.98■□□□□ 0.15
SRRT-206ENST00000460194 KIF1BPQ96EK5 621 aa15.98■□□□□ 0.15
SRRT-206ENST00000460194 TANGO6Q9C0B7 1094 aa15.98■□□□□ 0.15
SRRT-206ENST00000460194 ARMT1Q9H993 441 aa15.98■□□□□ 0.15
SRRT-206ENST00000460194 CYP2D7A0A087X1C5 515 aa15.97■□□□□ 0.15
SRRT-206ENST00000460194 TRIM43BA6NCK2 446 aa15.97■□□□□ 0.15
SRRT-206ENST00000460194 FAM47AQ5JRC9 791 aa15.97■□□□□ 0.15
SRRT-206ENST00000460194 C9orf50Q5SZB4 431 aa15.97■□□□□ 0.15
SRRT-206ENST00000460194 SH3RF1Q7Z6J0 888 aa15.97■□□□□ 0.15
SRRT-206ENST00000460194 RPAP2Q8IXW5 612 aaPredicted RBP15.97■□□□□ 0.15
SRRT-206ENST00000460194 SPICE1Q8N0Z3 855 aa15.97■□□□□ 0.15
SRRT-206ENST00000460194 CLASRPQ8N2M8 674 aaKnown RBP15.97■□□□□ 0.15
SRRT-206ENST00000460194 REPS2Q8NFH8 660 aa15.97■□□□□ 0.15
SRRT-206ENST00000460194 TRIM43Q96BQ3 446 aaPredicted RBP15.97■□□□□ 0.15
SRRT-206ENST00000460194 LBHD1Q9BQE6 289 aaPredicted RBP15.97■□□□□ 0.15
SRRT-206ENST00000460194 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.97■□□□□ 0.15
SRRT-206ENST00000460194 COL25A1Q9BXS0 654 aaPredicted RBP15.97■□□□□ 0.15
SRRT-206ENST00000460194 PDLIM7Q9NR12 457 aa15.97■□□□□ 0.15
SRRT-206ENST00000460194 ATP8A2Q9NTI2 1148 aa15.97■□□□□ 0.15
SRRT-206ENST00000460194 ZBTB40Q9NUA8 1239 aa15.97■□□□□ 0.15
SRRT-206ENST00000460194 FLOT1O75955 427 aa15.96■□□□□ 0.15
SRRT-206ENST00000460194 ITGB8P26012 769 aa15.96■□□□□ 0.15
SRRT-206ENST00000460194 CDK8P49336 464 aa15.96■□□□□ 0.15
SRRT-206ENST00000460194 HNRNPUQ00839 825 aaKnown RBP eCLIP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms