RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 KLRF2D3W0D1 207 aa15.64■□□□□ 0.09
CLK3-203ENST00000454830 LRRC47Q8N1G4 583 aaKnown RBP15.64■□□□□ 0.09
CLK3-203ENST00000454830 CCDC194A0A1B0GVG4 234 aa15.64■□□□□ 0.09
CLK3-203ENST00000454830 KLRG2A4D1S0 409 aaPredicted RBP15.64■□□□□ 0.09
CLK3-203ENST00000454830 PARP1P09874 1014 aaKnown RBP15.64■□□□□ 0.09
CLK3-203ENST00000454830 FUT2Q10981 343 aa15.64■□□□□ 0.09
CLK3-203ENST00000454830 LONRF3Q496Y0 759 aa15.64■□□□□ 0.09
CLK3-203ENST00000454830 TTC38Q5R3I4 469 aa15.64■□□□□ 0.09
CLK3-203ENST00000454830 CEP95Q96GE4 821 aa15.64■□□□□ 0.09
CLK3-203ENST00000454830 PHF20Q9BVI0 1012 aa15.64■□□□□ 0.09
CLK3-203ENST00000454830 HOOK1Q9UJC3 728 aaKnown RBP15.64■□□□□ 0.09
CLK3-203ENST00000454830 VWA3AA6NCI4 1184 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 CAVIN2O95810 425 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 TPM4P67936 248 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 DHX58Q96C10 678 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 UBA5Q9GZZ9 404 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 PPP1R1BQ9UD71 204 aaPredicted RBP15.63■□□□□ 0.09
CLK3-203ENST00000454830 SMC2O95347 1197 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 SLC15A2Q16348 729 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 C17orf53Q8N3J3 647 aaPredicted RBP15.63■□□□□ 0.09
CLK3-203ENST00000454830 FRMPD2Q68DX3 1309 aaPredicted RBP15.63■□□□□ 0.09
CLK3-203ENST00000454830 HLA-DOAP06340 250 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 FILIP1Q7Z7B0 1213 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 KLHL34Q8N239 644 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 CSRNP2Q9H175 543 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 CLIP2Q9UDT6 1046 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 SEC63Q9UGP8 760 aaKnown RBP15.63■□□□□ 0.09
CLK3-203ENST00000454830 FAM205AQ6ZU69 1335 aa15.63■□□□□ 0.09
CLK3-203ENST00000454830 FAM196BA6NMK8 535 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 SLURP2P0DP57 97 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 AFMP43652 599 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 AOC3Q16853 763 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 RESP18Q5W5W9 173 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 C21orf2O43822 256 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 PTGS1P23219 599 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 NAPAP54920 295 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 PFKFB3Q16875 520 aaPredicted RBP15.62■□□□□ 0.09
CLK3-203ENST00000454830 C16orf86Q6ZW13 317 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 USP49Q70CQ1 688 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 CCDC186Q7Z3E2 898 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 SHISA4Q96DD7 197 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 GPCPD1Q9NPB8 672 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 SERTAD1Q9UHV2 236 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 HSP90AA4PQ58FG1 418 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 POTEAQ6S8J7 498 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 GRAMD1CQ8IYS0 662 aa15.62■□□□□ 0.09
CLK3-203ENST00000454830 FOXN1O15353 648 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 CCDC96Q2M329 555 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 SOGA3Q5TF21 947 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 DEFB132Q7Z7B7 95 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 CCDC34Q96HJ3 373 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 DDX4Q9NQI0 724 aaKnown RBP15.61■□□□□ 0.09
CLK3-203ENST00000454830 NID2Q14112 1375 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 ECE2O60344 883 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 PTPREP23469 700 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 CALML3P27482 149 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 ZNF75DP51815 510 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 PTGDRQ13258 359 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 KRBA2Q6ZNG9 492 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 CNKSR1Q969H4 720 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.61■□□□□ 0.09
CLK3-203ENST00000454830 SERPINB13Q9UIV8 391 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 PCDHAC2Q9Y5I4 1007 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 PPIP5K2O43314 1243 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 CRKP46108 304 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 GRM4Q14833 912 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 BLIDQ8IZY5 108 aa15.61■□□□□ 0.09
CLK3-203ENST00000454830 PDGFDQ9GZP0 370 aaPredicted RBP15.61■□□□□ 0.09
CLK3-203ENST00000454830 FBXO2Q9UK22 296 aaPredicted RBP15.61■□□□□ 0.09
CLK3-203ENST00000454830 LMOD1P29536 600 aaPredicted RBP15.6■□□□□ 0.09
CLK3-203ENST00000454830 NFIAQ12857 509 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 NEDD1Q8NHV4 660 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 EPSTI1Q96J88 318 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 NRBP1Q9UHY1 535 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 AKR1B1P15121 316 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 CDC42EP5Q6NZY7 148 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 PODNQ7Z5L7 613 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 STAMQ92783 540 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 FAM163AQ96GL9 167 aaPredicted RBP15.6■□□□□ 0.09
CLK3-203ENST00000454830 GAKO14976 1311 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 TOP1P11387 765 aaKnown RBP15.6■□□□□ 0.09
CLK3-203ENST00000454830 NLRP12P59046 1061 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 MAD2L2Q9UI95 211 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 PCDHA5Q9Y5H7 936 aa15.6■□□□□ 0.09
CLK3-203ENST00000454830 USP17L5A8MUK1 530 aa15.59■□□□□ 0.09
CLK3-203ENST00000454830 IQCB1Q15051 598 aa15.59■□□□□ 0.09
CLK3-203ENST00000454830 RRP36Q96EU6 259 aaKnown RBP15.59■□□□□ 0.09
CLK3-203ENST00000454830 WNT7AO00755 349 aa15.59■□□□□ 0.09
CLK3-203ENST00000454830 CCDC148Q8NFR7 591 aa15.59■□□□□ 0.09
CLK3-203ENST00000454830 R3HCC1Q9Y3T6 440 aaKnown RBP15.59■□□□□ 0.09
CLK3-203ENST00000454830 SRPRBQ9Y5M8 271 aaKnown RBP15.59■□□□□ 0.09
CLK3-203ENST00000454830 IGSF3O75054 1194 aa15.59■□□□□ 0.09
CLK3-203ENST00000454830 RGS22Q8NE09 1264 aa15.59■□□□□ 0.09
CLK3-203ENST00000454830 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.59■□□□□ 0.09
CLK3-203ENST00000454830 INF2Q27J81 1249 aa15.58■□□□□ 0.09
CLK3-203ENST00000454830 WWC2Q6AWC2 1192 aa15.58■□□□□ 0.09
CLK3-203ENST00000454830 SMARCE1Q969G3 411 aa15.58■□□□□ 0.09
CLK3-203ENST00000454830 MYH6P13533 1939 aa15.58■□□□□ 0.09
CLK3-203ENST00000454830 SYMPKQ92797 1274 aaKnown RBP15.58■□□□□ 0.08
CLK3-203ENST00000454830 ADAMTS3O15072 1205 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms