RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 KBTBD3Q8NAB2 608 aa22.29■■□□□ 1.16
UBE2D4-208ENST00000454350 STRBPQ96SI9 672 aaKnown RBP22.29■■□□□ 1.16
UBE2D4-208ENST00000454350 PRO3102Q9H379 93 aa22.29■■□□□ 1.16
UBE2D4-208ENST00000454350 SLC4A4Q9Y6R1 1079 aa22.29■■□□□ 1.16
UBE2D4-208ENST00000454350 RGS2P41220 211 aa22.28■■□□□ 1.16
UBE2D4-208ENST00000454350 CACNB2Q08289 660 aaPredicted RBP22.28■■□□□ 1.16
UBE2D4-208ENST00000454350 MAP2K5Q13163 448 aa22.28■■□□□ 1.16
UBE2D4-208ENST00000454350 ZSCAN25Q6NSZ9 544 aa22.28■■□□□ 1.16
UBE2D4-208ENST00000454350 ANKLE1Q8NAG6 615 aa22.28■■□□□ 1.16
UBE2D4-208ENST00000454350 OSBP2Q969R2 916 aa22.28■■□□□ 1.16
UBE2D4-208ENST00000454350 APBA2Q99767 749 aa22.28■■□□□ 1.16
UBE2D4-208ENST00000454350 OGDHLQ9ULD0 1010 aa22.28■■□□□ 1.16
UBE2D4-208ENST00000454350 TMX2Q9Y320 296 aa22.28■■□□□ 1.16
UBE2D4-208ENST00000454350 IGHA2P01877 340 aa22.27■■□□□ 1.16
UBE2D4-208ENST00000454350 PTPREP23469 700 aa22.27■■□□□ 1.16
UBE2D4-208ENST00000454350 COG2Q14746 738 aa22.27■■□□□ 1.16
UBE2D4-208ENST00000454350 TRMT44Q8IYL2 757 aaKnown RBP22.27■■□□□ 1.16
UBE2D4-208ENST00000454350 CCDC17Q96LX7 622 aa22.27■■□□□ 1.16
UBE2D4-208ENST00000454350 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.27■■□□□ 1.16
UBE2D4-208ENST00000454350 FLRT1Q9NZU1 646 aa22.27■■□□□ 1.16
UBE2D4-208ENST00000454350 MYH4Q9Y623 1939 aa22.27■■□□□ 1.16
UBE2D4-208ENST00000454350 GSG1L2A8MUP6 293 aa22.26■■□□□ 1.15
UBE2D4-208ENST00000454350 ZKSCAN1P17029 563 aaPredicted RBP22.26■■□□□ 1.15
UBE2D4-208ENST00000454350 CCNA1P78396 465 aa22.26■■□□□ 1.15
UBE2D4-208ENST00000454350 GRB14Q14449 540 aa22.26■■□□□ 1.15
UBE2D4-208ENST00000454350 CCAR1Q8IX12 1150 aaKnown RBP22.26■■□□□ 1.15
UBE2D4-208ENST00000454350 PCDH10Q9P2E7 1040 aa22.26■■□□□ 1.15
UBE2D4-208ENST00000454350 SLC15A5A6NIM6 579 aa22.25■■□□□ 1.15
UBE2D4-208ENST00000454350 HOXC6P09630 235 aa22.25■■□□□ 1.15
UBE2D4-208ENST00000454350 CCND3P30281 292 aaPredicted RBP22.25■■□□□ 1.15
UBE2D4-208ENST00000454350 ICA1Q05084 483 aa22.25■■□□□ 1.15
UBE2D4-208ENST00000454350 LHX8Q68G74 356 aa22.25■■□□□ 1.15
UBE2D4-208ENST00000454350 CHRDL2Q6WN34 429 aa22.25■■□□□ 1.15
UBE2D4-208ENST00000454350 NECAB2Q7Z6G3 386 aa22.25■■□□□ 1.15
UBE2D4-208ENST00000454350 OTUD7AQ8TE49 926 aaPredicted RBP22.25■■□□□ 1.15
UBE2D4-208ENST00000454350 LPAR1Q92633 364 aa22.25■■□□□ 1.15
UBE2D4-208ENST00000454350 VCPKMTQ9H867 229 aa22.25■■□□□ 1.15
UBE2D4-208ENST00000454350 HOXC10Q9NYD6 342 aa22.25■■□□□ 1.15
UBE2D4-208ENST00000454350 SBK1Q52WX2 424 aa22.24■■□□□ 1.15
UBE2D4-208ENST00000454350 NPLOC4Q8TAT6 608 aa22.24■■□□□ 1.15
UBE2D4-208ENST00000454350 PI4K2BQ8TCG2 481 aa22.24■■□□□ 1.15
UBE2D4-208ENST00000454350 APPBP2Q92624 585 aa22.24■■□□□ 1.15
UBE2D4-208ENST00000454350 MOV10L1Q9BXT6 1211 aaKnown RBP22.24■■□□□ 1.15
UBE2D4-208ENST00000454350 TANGO6Q9C0B7 1094 aa22.24■■□□□ 1.15
UBE2D4-208ENST00000454350 RBM27Q9P2N5 1060 aaKnown RBP22.24■■□□□ 1.15
UBE2D4-208ENST00000454350 RNF113AO15541 343 aaKnown RBP22.23■■□□□ 1.15
UBE2D4-208ENST00000454350 EEF2P13639 858 aaKnown RBP22.23■■□□□ 1.15
UBE2D4-208ENST00000454350 DSG3P32926 999 aa22.23■■□□□ 1.15
UBE2D4-208ENST00000454350 SPICE1Q8N0Z3 855 aa22.23■■□□□ 1.15
UBE2D4-208ENST00000454350 ARHGEF10LQ9HCE6 1279 aa22.23■■□□□ 1.15
UBE2D4-208ENST00000454350 EPB41L4AQ9HCS5 686 aaPredicted RBP22.23■■□□□ 1.15
UBE2D4-208ENST00000454350 ARPP21Q9UBL0 812 aaPredicted RBP22.23■■□□□ 1.15
UBE2D4-208ENST00000454350 NR2E3Q9Y5X4 410 aa22.23■■□□□ 1.15
UBE2D4-208ENST00000454350 PLXNA1Q9UIW2 1896 aa22.23■■□□□ 1.15
UBE2D4-208ENST00000454350 LAMA3Q16787 3333 aa22.23■■□□□ 1.15
UBE2D4-208ENST00000454350 ROBO3Q96MS0 1386 aa22.23■■□□□ 1.15
UBE2D4-208ENST00000454350 GLRX3O76003 335 aaKnown RBP22.22■■□□□ 1.15
UBE2D4-208ENST00000454350 RRP1P56182 461 aaKnown RBP22.22■■□□□ 1.15
UBE2D4-208ENST00000454350 GIMAP6Q6P9H5 292 aa22.22■■□□□ 1.15
UBE2D4-208ENST00000454350 AMOTL1Q8IY63 956 aa22.22■■□□□ 1.15
UBE2D4-208ENST00000454350 DDRGK1Q96HY6 314 aa22.22■■□□□ 1.15
UBE2D4-208ENST00000454350 GPATCH3Q96I76 525 aa22.22■■□□□ 1.15
UBE2D4-208ENST00000454350 SPATC1LQ9H0A9 340 aa22.22■■□□□ 1.15
UBE2D4-208ENST00000454350 ADAMTS5Q9UNA0 930 aa22.22■■□□□ 1.15
UBE2D4-208ENST00000454350 SMCHD1A6NHR9 2005 aa22.22■■□□□ 1.15
UBE2D4-208ENST00000454350 SALL3Q9BXA9 1300 aa22.22■■□□□ 1.15
UBE2D4-208ENST00000454350 M0R2C6 588 aa22.21■■□□□ 1.15
UBE2D4-208ENST00000454350 EVI5O60447 810 aa22.21■■□□□ 1.15
UBE2D4-208ENST00000454350 COL6A1P12109 1028 aa22.21■■□□□ 1.15
UBE2D4-208ENST00000454350 RASA1P20936 1047 aa22.21■■□□□ 1.15
UBE2D4-208ENST00000454350 WDR78Q5VTH9 848 aa22.21■■□□□ 1.15
UBE2D4-208ENST00000454350 SHCBP1Q8NEM2 672 aa22.21■■□□□ 1.15
UBE2D4-208ENST00000454350 ATG4CQ96DT6 458 aa22.21■■□□□ 1.15
UBE2D4-208ENST00000454350 NBPF3Q9H094 633 aa22.21■■□□□ 1.15
UBE2D4-208ENST00000454350 KANSL2Q9H9L4 492 aa22.21■■□□□ 1.15
UBE2D4-208ENST00000454350 PFASO15067 1338 aa22.21■■□□□ 1.15
UBE2D4-208ENST00000454350 TTC41PQ6P2S7 1318 aa22.21■■□□□ 1.15
UBE2D4-208ENST00000454350 WDR46O15213 610 aaKnown RBP22.2■■□□□ 1.14
UBE2D4-208ENST00000454350 GPAA1O43292 621 aa22.2■■□□□ 1.14
UBE2D4-208ENST00000454350 ZFYP08048 801 aaPredicted RBP22.2■■□□□ 1.14
UBE2D4-208ENST00000454350 MB21D1Q8N884 522 aa22.2■■□□□ 1.14
UBE2D4-208ENST00000454350 SH2D4AQ9H788 454 aa22.2■■□□□ 1.14
UBE2D4-208ENST00000454350 DNAH12Q6ZR08 3092 aa22.2■■□□□ 1.14
UBE2D4-208ENST00000454350 FLOT1O75955 427 aa22.19■■□□□ 1.14
UBE2D4-208ENST00000454350 ERCC3P19447 782 aa22.19■■□□□ 1.14
UBE2D4-208ENST00000454350 TRPV1Q8NER1 839 aa22.19■■□□□ 1.14
UBE2D4-208ENST00000454350 CWC22Q9HCG8 908 aaKnown RBP22.19■■□□□ 1.14
UBE2D4-208ENST00000454350 FBXO28Q9NVF7 368 aa22.19■■□□□ 1.14
UBE2D4-208ENST00000454350 IVNS1ABPQ9Y6Y0 642 aa22.19■■□□□ 1.14
UBE2D4-208ENST00000454350 COBLO75128 1261 aa22.18■■□□□ 1.14
UBE2D4-208ENST00000454350 ADORA2AP29274 412 aa22.18■■□□□ 1.14
UBE2D4-208ENST00000454350 TMEM132BQ14DG7 1078 aa22.18■■□□□ 1.14
UBE2D4-208ENST00000454350 SEC62Q99442 399 aaKnown RBP22.18■■□□□ 1.14
UBE2D4-208ENST00000454350 C11orf49Q9H6J7 331 aa22.18■■□□□ 1.14
UBE2D4-208ENST00000454350 STRNO43815 780 aa22.17■■□□□ 1.14
UBE2D4-208ENST00000454350 CYP2C19P33261 490 aa22.17■■□□□ 1.14
UBE2D4-208ENST00000454350 MFSD14CQ5VZR4 134 aa22.17■■□□□ 1.14
UBE2D4-208ENST00000454350 CRBNQ96SW2 442 aa22.17■■□□□ 1.14
UBE2D4-208ENST00000454350 IGKV6D-41A0A0C4DH26 115 aa22.16■■□□□ 1.14
UBE2D4-208ENST00000454350 MINDY4BA8MYZ0 360 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms