RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 SUDS3Q9H7L9 328 aaPredicted RBP9.01□□□□□ -0.97
BRCC3-208ENST00000453705 LRP5O75197 1615 aa9.01□□□□□ -0.97
BRCC3-208ENST00000453705 FMNL1O95466 1100 aaPredicted RBP9□□□□□ -0.97
BRCC3-208ENST00000453705 RENBPP51606 427 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 TAF3Q5VWG9 929 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 LLGL2Q6P1M3 1020 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9□□□□□ -0.97
BRCC3-208ENST00000453705 FAM174AQ8TBP5 190 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 FAM200AQ8TCP9 573 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 ZSWIM6Q9HCJ5 1215 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 GTF2A1LQ9UNN4 478 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 BCL9O00512 1426 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 NUP98P52948 1817 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 ADAMTS2O95450 1211 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 IL33O95760 270 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 DSG2Q14126 1118 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 LARP1Q6PKG0 1096 aaKnown RBP9□□□□□ -0.97
BRCC3-208ENST00000453705 CATIPQ7Z7H3 387 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 IQCF2Q8IXL9 164 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 STON2Q8WXE9 905 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 APPBP2Q92624 585 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 CCDC8Q9H0W5 538 aaPredicted RBP9□□□□□ -0.97
BRCC3-208ENST00000453705 FAM50BQ9Y247 325 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 NHSQ6T4R5 1651 aa9□□□□□ -0.97
BRCC3-208ENST00000453705 F6X3S4 739 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 BAIAP3O94812 1187 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 UBTFL1P0CB47 393 aaPredicted RBP8.99□□□□□ -0.97
BRCC3-208ENST00000453705 GYS1P13807 737 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 EPHB1P54762 984 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 PAK2Q13177 524 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 PNMA8AQ86V59 439 aaPredicted RBP8.99□□□□□ -0.97
BRCC3-208ENST00000453705 REM2Q8IYK8 340 aaPredicted RBP8.99□□□□□ -0.97
BRCC3-208ENST00000453705 STK11IPQ8N1F8 1099 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 KCT2Q8NC54 265 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 LSM14AQ8ND56 463 aaKnown RBP8.99□□□□□ -0.97
BRCC3-208ENST00000453705 RELTQ969Z4 430 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 PHAXQ9H814 394 aaKnown RBP8.99□□□□□ -0.97
BRCC3-208ENST00000453705 RFX7Q2KHR2 1363 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 HSPA1LP34931 641 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 HYIQ5T013 277 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 MAP3K14Q99558 947 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 METTL22Q9BUU2 404 aaPredicted RBP8.99□□□□□ -0.97
BRCC3-208ENST00000453705 TEX13AQ9BXU3 409 aaPredicted RBP8.99□□□□□ -0.97
BRCC3-208ENST00000453705 SUN2Q9UH99 717 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 PPP1R9AQ9ULJ8 1098 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 CD2APQ9Y5K6 639 aa8.99□□□□□ -0.97
BRCC3-208ENST00000453705 FAM196BA6NMK8 535 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 USP17L5A8MUK1 530 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 GSPT1P15170 499 aaKnown RBP8.98□□□□□ -0.97
BRCC3-208ENST00000453705 DAB2P98082 770 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 DPYDQ12882 1025 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 TRIM29Q14134 588 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 GPATCH4Q5T3I0 446 aaKnown RBP8.98□□□□□ -0.97
BRCC3-208ENST00000453705 AGAP9Q5VTM2 703 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 ANKS3Q6ZW76 656 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 TTC14Q96N46 770 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 PURBQ96QR8 312 aaKnown RBP8.98□□□□□ -0.97
BRCC3-208ENST00000453705 AP1M1Q9BXS5 423 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 YY1AP1Q9H869 796 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 CEP72Q9P209 647 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 SNX5Q9Y5X3 404 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 RASSF10A6NK89 507 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 SEC24BO95487 1268 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 ENPP1P22413 925 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 MZF1P28698 734 aaPredicted RBP8.98□□□□□ -0.97
BRCC3-208ENST00000453705 CCDC15Q0P6D6 951 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 SFSWAPQ12872 951 aaKnown RBP8.98□□□□□ -0.97
BRCC3-208ENST00000453705 BECN1Q14457 450 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 RABL6Q3YEC7 729 aaPredicted RBP8.98□□□□□ -0.97
BRCC3-208ENST00000453705 RTL10Q7L3V2 364 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 ERC1Q8IUD2 1116 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 SMAP1Q8IYB5 467 aaPredicted RBP8.98□□□□□ -0.97
BRCC3-208ENST00000453705 PLPP7Q8NBV4 271 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 ASPSCR1Q9BZE9 553 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 COMMD8Q9NX08 183 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 RRP15Q9Y3B9 282 aaKnown RBP8.98□□□□□ -0.97
BRCC3-208ENST00000453705 TTC41PQ6P2S7 1318 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 GTPBP10A4D1E9 387 aaKnown RBP8.98□□□□□ -0.97
BRCC3-208ENST00000453705 PI4KAP2A4QPH2 592 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 TRPC1P48995 793 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 FOXK1P85037 733 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 OCLNQ16625 522 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 WDR45BQ5MNZ6 344 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 DZIP3Q86Y13 1208 aaKnown RBP8.98□□□□□ -0.97
BRCC3-208ENST00000453705 PI4KAP1Q8N8J0 262 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 SMARCC1Q92922 1105 aaPredicted RBP8.98□□□□□ -0.97
BRCC3-208ENST00000453705 FEZ1Q99689 392 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 LRRCC1Q9C099 1032 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 DCAF16Q9NXF7 216 aa8.98□□□□□ -0.97
BRCC3-208ENST00000453705 CASZ1Q86V15 1759 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 LY75O60449 1722 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 SCN7AQ01118 1682 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 VSTM5A8MXK1 200 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 ABCD1P33897 745 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 TCIRG1Q13488 830 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 IFNL1Q8IU54 200 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 GIMAP8Q8ND71 665 aaPredicted RBP8.97□□□□□ -0.97
BRCC3-208ENST00000453705 MGARPQ8TDB4 240 aa8.97□□□□□ -0.97
BRCC3-208ENST00000453705 OSBPL5Q9H0X9 879 aaPredicted RBP8.97□□□□□ -0.97
BRCC3-208ENST00000453705 LRRFIP2Q9Y608 721 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms