RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 NBPF11Q86T75 865 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 LINC00528Q8N1L1 170 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 DHX38Q92620 1227 aaKnown RBP7.84□□□□□ -1.15
KARSP1-201ENST00000451871 RNF34Q969K3 372 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 PHACTR3Q96KR7 559 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 GRIP2Q9C0E4 1043 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 CAPN10Q9HC96 672 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 POLLQ9UGP5 575 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 ZNF232Q9UNY5 417 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 LRRC37AA6NMS7 1700 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 DDX60Q8IY21 1712 aaKnown RBP7.84□□□□□ -1.15
KARSP1-201ENST00000451871 U2SURPO15042 1029 aaKnown RBP7.84□□□□□ -1.15
KARSP1-201ENST00000451871 SPINT1O43278 529 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 HCLS1P14317 486 aaPredicted RBP7.84□□□□□ -1.15
KARSP1-201ENST00000451871 MYL6BP14649 208 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 CTSOP43234 321 aaPredicted RBP7.84□□□□□ -1.15
KARSP1-201ENST00000451871 CAP1Q01518 475 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 MCM10Q7L590 875 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 ALDH16A1Q8IZ83 802 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 DPF3Q92784 378 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 TSEN34Q9BSV6 310 aaKnown RBP7.84□□□□□ -1.15
KARSP1-201ENST00000451871 MYOZ2Q9NPC6 264 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 CHMP3Q9Y3E7 222 aa7.84□□□□□ -1.15
KARSP1-201ENST00000451871 LAMA2P24043 3122 aaKnown RBP7.84□□□□□ -1.15
KARSP1-201ENST00000451871 PRUNE2Q8WUY3 3088 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 TMEM265A0A087WTH1 108 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 MANSC4A6NHS7 340 aaPredicted RBP7.83□□□□□ -1.16
KARSP1-201ENST00000451871 NF2P35240 595 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 ALKBH2Q6NS38 261 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 TMEM214Q6NUQ4 689 aaKnown RBP7.83□□□□□ -1.16
KARSP1-201ENST00000451871 ARMC9Q7Z3E5 817 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 AGBL3Q8NEM8 1001 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 RTF1Q92541 710 aaKnown RBP7.83□□□□□ -1.16
KARSP1-201ENST00000451871 MYO19Q96H55 970 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 EYA3Q99504 573 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 NIFKQ9BYG3 293 aaKnown RBP7.83□□□□□ -1.16
KARSP1-201ENST00000451871 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.83□□□□□ -1.16
KARSP1-201ENST00000451871 PRKAG2Q9UGJ0 569 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 POLIQ9UNA4 740 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 EYSQ5T1H1 3165 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 PSME4Q14997 1843 aa7.83□□□□□ -1.16
KARSP1-201ENST00000451871 PNMA6FA0A0J9YX94 578 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 WTIPA6NIX2 430 aaPredicted RBP7.82□□□□□ -1.16
KARSP1-201ENST00000451871 IGF2BP3O00425 579 aaKnown RBP eCLIP7.82□□□□□ -1.16
KARSP1-201ENST00000451871 GPC1P35052 558 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 RNF144AP50876 292 aaPredicted RBP7.82□□□□□ -1.16
KARSP1-201ENST00000451871 SP3Q02447 781 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 SLC9C1Q4G0N8 1177 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 RHBDD1Q8TEB9 315 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 MTMR10Q9NXD2 777 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 ZNF609O15014 1411 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 LAMB1P07942 1786 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 ZNF76P36508 570 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 TXLNAP40222 546 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 GPSM2P81274 684 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 ATP2B2Q01814 1243 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 PRKG1Q13976 671 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 DCTN1Q14203 1278 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 TAF7Q15545 349 aaPredicted RBP7.82□□□□□ -1.16
KARSP1-201ENST00000451871 C4orf17Q53FE4 359 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 ALKBH8Q96BT7 664 aaKnown RBP7.82□□□□□ -1.16
KARSP1-201ENST00000451871 GMLQ99445 158 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 PHACTR1Q9C0D0 580 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 ZC3H12CQ9C0D7 883 aaKnown RBP7.82□□□□□ -1.16
KARSP1-201ENST00000451871 TGIF2Q9GZN2 237 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 CCSER2Q9H7U1 834 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 POLMQ9NP87 494 aaPredicted RBP7.82□□□□□ -1.16
KARSP1-201ENST00000451871 MIS18AQ9NYP9 233 aa7.82□□□□□ -1.16
KARSP1-201ENST00000451871 MUC3AQ02505 3323 aa7.81□□□□□ -1.16
KARSP1-201ENST00000451871 SYNGAP1Q96PV0 1343 aa7.81□□□□□ -1.16
KARSP1-201ENST00000451871 DNM1Q05193 864 aaKnown RBP7.81□□□□□ -1.16
KARSP1-201ENST00000451871 CRHR2Q13324 411 aa7.81□□□□□ -1.16
KARSP1-201ENST00000451871 ENOX2Q16206 610 aaKnown RBP7.81□□□□□ -1.16
KARSP1-201ENST00000451871 NBPF9Q3BBW0 867 aa7.81□□□□□ -1.16
KARSP1-201ENST00000451871 TBC1D16Q8TBP0 767 aa7.81□□□□□ -1.16
KARSP1-201ENST00000451871 LNPKQ9C0E8 428 aa7.81□□□□□ -1.16
KARSP1-201ENST00000451871 KLK14Q9P0G3 267 aa7.81□□□□□ -1.16
KARSP1-201ENST00000451871 PTCH2Q9Y6C5 1203 aa7.81□□□□□ -1.16
KARSP1-201ENST00000451871 PRKAR2BP31323 418 aa7.8□□□□□ -1.16
KARSP1-201ENST00000451871 GTF2F1P35269 517 aaKnown RBP eCLIP7.8□□□□□ -1.16
KARSP1-201ENST00000451871 PLA2G4AP47712 749 aa7.8□□□□□ -1.16
KARSP1-201ENST00000451871 C6orf118Q5T5N4 469 aa7.8□□□□□ -1.16
KARSP1-201ENST00000451871 OTUD7BQ6GQQ9 843 aa7.8□□□□□ -1.16
KARSP1-201ENST00000451871 CELF1Q92879 486 aaKnown RBP7.8□□□□□ -1.16
KARSP1-201ENST00000451871 METTL5Q9NRN9 209 aaKnown RBP7.8□□□□□ -1.16
KARSP1-201ENST00000451871 ANGEL1Q9UNK9 670 aaKnown RBP7.8□□□□□ -1.16
KARSP1-201ENST00000451871 ZBTB48P10074 688 aaPredicted RBP7.79□□□□□ -1.16
KARSP1-201ENST00000451871 BMP1P13497 986 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 MAP3K12Q12852 859 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 RTN1Q16799 776 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 NLRP10Q86W26 655 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 ETFBKMTQ8IXQ9 262 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 TRMT112Q9UI30 125 aaKnown RBP7.79□□□□□ -1.16
KARSP1-201ENST00000451871 RPTORQ8N122 1335 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 SH3TC1Q8TE82 1336 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 ZNF646O15015 1829 aaPredicted RBP7.79□□□□□ -1.16
KARSP1-201ENST00000451871 NCOR1O75376 2440 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 FAM187AA6NFU0 413 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 WNT10BO00744 389 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 CTSHP09668 335 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms