RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 ATAD5Q96QE3 1844 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.13□□□□□ -0.95
RBM39-218ENST00000449489 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.13□□□□□ -0.95
RBM39-218ENST00000449489 C19orf81C9J6K1 198 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 F6X3S4 739 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 GLRX3O76003 335 aaKnown RBP9.13□□□□□ -0.95
RBM39-218ENST00000449489 MS4A1P11836 297 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 SLC5A1P13866 664 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 PBX2P40425 430 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 BACE1P56817 501 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 ERVK-24P63145 666 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 CCL14Q16627 93 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 CCDC84Q86UT8 332 aaPredicted RBP9.13□□□□□ -0.95
RBM39-218ENST00000449489 ADAMTS19Q8TE59 1207 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 EDC3Q96F86 508 aaKnown RBP9.13□□□□□ -0.95
RBM39-218ENST00000449489 KCNK17Q96T54 332 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 PHOX2BQ99453 314 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 SRCIN1Q9C0H9 1055 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.13□□□□□ -0.95
RBM39-218ENST00000449489 TXNRD2Q9NNW7 524 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 DDX4Q9NQI0 724 aaKnown RBP9.13□□□□□ -0.95
RBM39-218ENST00000449489 PDLIM7Q9NR12 457 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 FAM217BQ9NTX9 383 aaPredicted RBP9.13□□□□□ -0.95
RBM39-218ENST00000449489 GINM1Q9NU53 330 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 GNL3LQ9NVN8 582 aaKnown RBP9.13□□□□□ -0.95
RBM39-218ENST00000449489 DENND2AQ9ULE3 1009 aa9.13□□□□□ -0.95
RBM39-218ENST00000449489 PDS5AQ29RF7 1337 aaKnown RBP9.12□□□□□ -0.95
RBM39-218ENST00000449489 USP34Q70CQ2 3546 aa9.12□□□□□ -0.95
RBM39-218ENST00000449489 DNAJB2P25686 324 aa9.12□□□□□ -0.95
RBM39-218ENST00000449489 Q3C1V9 767 aa9.12□□□□□ -0.95
RBM39-218ENST00000449489 WWC1Q8IX03 1113 aa9.12□□□□□ -0.95
RBM39-218ENST00000449489 CCAR1Q8IX12 1150 aaKnown RBP9.12□□□□□ -0.95
RBM39-218ENST00000449489 ZNF576Q9H609 170 aa9.12□□□□□ -0.95
RBM39-218ENST00000449489 BICC1Q9H694 974 aaKnown RBP9.12□□□□□ -0.95
RBM39-218ENST00000449489 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.12□□□□□ -0.95
RBM39-218ENST00000449489 HERC5Q9UII4 1024 aaKnown RBP9.12□□□□□ -0.95
RBM39-218ENST00000449489 ATP11BQ9Y2G3 1177 aa9.12□□□□□ -0.95
RBM39-218ENST00000449489 TACC3Q9Y6A5 838 aa9.12□□□□□ -0.95
RBM39-218ENST00000449489 BRWD1Q9NSI6 2320 aa9.12□□□□□ -0.95
RBM39-218ENST00000449489 GPR75-ASB3A0A0A6YYF3 556 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 TRIM43BA6NCK2 446 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 SLC15A5A6NIM6 579 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 NBPF7P0C2Y1 421 aaPredicted RBP9.11□□□□□ -0.95
RBM39-218ENST00000449489 SLURP2P0DP57 97 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 CCNA1P78396 465 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 ANKRD44Q8N8A2 993 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 TATDN2Q93075 761 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 TRIM43Q96BQ3 446 aaPredicted RBP9.11□□□□□ -0.95
RBM39-218ENST00000449489 RNPC3Q96LT9 517 aaKnown RBP9.11□□□□□ -0.95
RBM39-218ENST00000449489 PCMTD1Q96MG8 357 aaPredicted RBP9.11□□□□□ -0.95
RBM39-218ENST00000449489 GAS2L1Q99501 681 aaPredicted RBP9.11□□□□□ -0.95
RBM39-218ENST00000449489 REPIN1Q9BWE0 567 aaKnown RBP9.11□□□□□ -0.95
RBM39-218ENST00000449489 SLC4A5Q9BY07 1137 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 PORCNQ9H237 461 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 TMOD4Q9NZQ9 345 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 RABGAP1Q9Y3P9 1069 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 HCN4Q9Y3Q4 1203 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 TRIOO75962 3097 aa9.11□□□□□ -0.95
RBM39-218ENST00000449489 RCCD1A6NED2 376 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 USP17L10C9JJH3 530 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 KBTBD13C9JR72 458 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 EYA2O00167 538 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 ARHGAP33O14559 1287 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 KIAA0355O15063 1070 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 ASNSP08243 561 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 RHBDL3P58872 404 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 ATP2B2Q01814 1243 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 TRIM60Q495X7 471 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 NUDT18Q6ZVK8 323 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 TIFAQ96CG3 184 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 PRDM5Q9NQX1 630 aaPredicted RBP9.1□□□□□ -0.95
RBM39-218ENST00000449489 FLRT1Q9NZU1 646 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 SMCHD1A6NHR9 2005 aa9.1□□□□□ -0.95
RBM39-218ENST00000449489 TCF20Q9UGU0 1960 aaKnown RBP9.1□□□□□ -0.95
RBM39-218ENST00000449489 CFAP54Q96N23 3096 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 BMP1P13497 986 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 CYBAP13498 195 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 BTDP43251 543 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 SLC4A3P48751 1232 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 MTMR2Q13614 643 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 GRB14Q14449 540 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 RRP1BQ14684 758 aaKnown RBP9.09□□□□□ -0.95
RBM39-218ENST00000449489 GJC2Q5T442 439 aaPredicted RBP9.09□□□□□ -0.95
RBM39-218ENST00000449489 OLFML2BQ68BL8 750 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 SPTY2D1Q68D10 685 aaPredicted RBP9.09□□□□□ -0.95
RBM39-218ENST00000449489 POTEEQ6S8J3 1075 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 LBX2Q6XYB7 198 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 SH3RF1Q7Z6J0 888 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 METTL16Q86W50 562 aaKnown RBP9.09□□□□□ -0.95
RBM39-218ENST00000449489 DZIP1Q86YF9 867 aaKnown RBP9.09□□□□□ -0.95
RBM39-218ENST00000449489 TRPV1Q8NER1 839 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 CXXC1Q9P0U4 656 aaPredicted RBP9.09□□□□□ -0.95
RBM39-218ENST00000449489 ZDBF2Q9HCK1 2354 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 PRRC2BQ5JSZ5 2229 aaKnown RBP9.09□□□□□ -0.95
RBM39-218ENST00000449489 SPTBN4Q9H254 2564 aa9.09□□□□□ -0.95
RBM39-218ENST00000449489 MROH7-TTC4A0A0A0MT08 1334 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 FANCIQ9NVI1 1328 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 SEPT4O43236 478 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 PEX10O60683 326 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 324 ms