RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 SLAIN1Q8ND83 568 aa10.86□□□□□ -0.67
RFX3-207ENST00000449190 TMOD4Q9NZQ9 345 aa10.86□□□□□ -0.67
RFX3-207ENST00000449190 CPA4Q9UI42 421 aa10.86□□□□□ -0.67
RFX3-207ENST00000449190 ZBTB21Q9ULJ3 1066 aa10.86□□□□□ -0.67
RFX3-207ENST00000449190 GH2P01242 217 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 CYP2C8P10632 490 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 OSBPP22059 807 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 HOXD10P28358 340 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 HOXA7P31268 230 aaPredicted RBP10.85□□□□□ -0.67
RFX3-207ENST00000449190 SHMT1P34896 483 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 NT5C2P49902 561 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 HMGCS2P54868 508 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 LACTBP83111 547 aaPredicted RBP10.85□□□□□ -0.67
RFX3-207ENST00000449190 MMRN1Q13201 1228 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 RRP12Q5JTH9 1297 aaKnown RBP10.85□□□□□ -0.67
RFX3-207ENST00000449190 AKNAD1Q5T1N1 836 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 CNNM2Q9H8M5 875 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 UPF2Q9HAU5 1272 aaKnown RBP10.85□□□□□ -0.67
RFX3-207ENST00000449190 PNMA3Q9UL41 463 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 HPS5Q9UPZ3 1129 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 PTPN22Q9Y2R2 807 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 MYH7P12883 1935 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 LAMB1P07942 1786 aa10.85□□□□□ -0.67
RFX3-207ENST00000449190 ADGRA2Q96PE1 1338 aa10.84□□□□□ -0.67
RFX3-207ENST00000449190 RANBP6O60518 1105 aaKnown RBP10.84□□□□□ -0.67
RFX3-207ENST00000449190 BCRP11274 1271 aa10.84□□□□□ -0.67
RFX3-207ENST00000449190 PRMT2P55345 433 aa10.84□□□□□ -0.67
RFX3-207ENST00000449190 PPP4R3BQ5MIZ7 849 aa10.84□□□□□ -0.67
RFX3-207ENST00000449190 TREML2Q5T2D2 321 aa10.84□□□□□ -0.67
RFX3-207ENST00000449190 CREB3L3Q68CJ9 461 aa10.84□□□□□ -0.67
RFX3-207ENST00000449190 USP17L2Q6R6M4 530 aa10.84□□□□□ -0.67
RFX3-207ENST00000449190 STAG1Q8WVM7 1258 aa10.84□□□□□ -0.67
RFX3-207ENST00000449190 KRT23Q9C075 422 aa10.84□□□□□ -0.67
RFX3-207ENST00000449190 ROBO3Q96MS0 1386 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 TSPY2A6NKD2 308 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 SLC27A2O14975 620 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 ORC4O43929 436 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 PRDM1O75626 825 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 TSPY3P0CV98 308 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 TSPY8P0CW00 308 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 GUCY1A2P33402 732 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 PSMC4P43686 418 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 GCLCP48506 637 aaPredicted RBP10.83□□□□□ -0.68
RFX3-207ENST00000449190 USP14P54578 494 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 CAP1Q01518 475 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 TFAP4Q01664 338 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 MTMR2Q13614 643 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 KRT32Q14532 448 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 RAB3GAP1Q15042 981 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 NECTIN1Q15223 517 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 SHROOM1Q2M3G4 852 aaPredicted RBP10.83□□□□□ -0.68
RFX3-207ENST00000449190 TMEM179Q6ZVK1 233 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 RALYLQ86SE5 291 aaKnown RBP10.83□□□□□ -0.68
RFX3-207ENST00000449190 SLC44A5Q8NCS7 719 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 ESR2Q92731 530 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 C12orf42Q96LP6 360 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 USP26Q9BXU7 913 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 KIAA1683Q9H0B3 1180 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 EMILIN3Q9NT22 766 aa10.83□□□□□ -0.68
RFX3-207ENST00000449190 E7EWF7 191 aa10.82□□□□□ -0.68
RFX3-207ENST00000449190 FMNL1O95466 1100 aaPredicted RBP10.82□□□□□ -0.68
RFX3-207ENST00000449190 CYP21A2P08686 494 aa10.82□□□□□ -0.68
RFX3-207ENST00000449190 RASA1P20936 1047 aa10.82□□□□□ -0.68
RFX3-207ENST00000449190 RGS19P49795 217 aa10.82□□□□□ -0.68
RFX3-207ENST00000449190 SEPT2Q15019 361 aa10.82□□□□□ -0.68
RFX3-207ENST00000449190 C8orf34Q49A92 452 aa10.82□□□□□ -0.68
RFX3-207ENST00000449190 CCDC178Q5BJE1 867 aa10.82□□□□□ -0.68
RFX3-207ENST00000449190 SPNS2Q8IVW8 549 aa10.82□□□□□ -0.68
RFX3-207ENST00000449190 NCOA7Q8NI08 942 aa10.82□□□□□ -0.68
RFX3-207ENST00000449190 SMCR8Q8TEV9 937 aaPredicted RBP10.82□□□□□ -0.68
RFX3-207ENST00000449190 ASCC2Q9H1I8 757 aaPredicted RBP10.82□□□□□ -0.68
RFX3-207ENST00000449190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.82□□□□□ -0.68
RFX3-207ENST00000449190 PCNTO95613 3336 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 DOCK1Q14185 1865 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 SMIM22K7EJ46 135 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 FGRP09769 529 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 AKR1B1P15121 316 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 PSMA5P28066 241 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 HSPA4P34932 840 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 FCGRTP55899 365 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 IRX3P78415 501 aaPredicted RBP10.81□□□□□ -0.68
RFX3-207ENST00000449190 ATP2B2Q01814 1243 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 FAM47AQ5JRC9 791 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 IQCA1Q86XH1 822 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 TBC1D10CQ8IV04 446 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 NEDD1Q8NHV4 660 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 ACER1Q8TDN7 264 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 P2RX7Q99572 595 aaKnown RBP10.81□□□□□ -0.68
RFX3-207ENST00000449190 ARHGAP39Q9C0H5 1083 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 SH2D4AQ9H788 454 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 KANSL2Q9H9L4 492 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 INCENPQ9NQS7 918 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 SRRDQ9UH36 339 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 MYH1P12882 1939 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 FOCADQ5VW36 1801 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 CDK5RAP2Q96SN8 1893 aa10.81□□□□□ -0.68
RFX3-207ENST00000449190 SIPA1L1O43166 1804 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 ERICH2A1L162 156 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 B4E1Z4 1266 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 USP17L15C9J2P7 530 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms