RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CYP19A1P11511 503 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-205ENST00000447267 FOSL2P15408 326 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 ALAS2P22557 587 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 INPP5BP32019 993 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 TMEM31Q5JXX7 168 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 ZMIZ1Q9ULJ6 1067 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 ZNRF3Q9ULT6 936 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 EYSQ5T1H1 3165 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 MUC6Q6W4X9 2439 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 PRUNE2Q8WUY3 3088 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 EVC2Q86UK5 1308 aa7.06□□□□□ -1.28
SDCBP-205ENST00000447267 LAMA2P24043 3122 aaKnown RBP7.06□□□□□ -1.28
SDCBP-205ENST00000447267 LOC105371045A0A1W2PR82 267 aa7.06□□□□□ -1.28
SDCBP-205ENST00000447267 IGF2BP3O00425 579 aaKnown RBP eCLIP7.06□□□□□ -1.28
SDCBP-205ENST00000447267 GJA8P48165 433 aa7.06□□□□□ -1.28
SDCBP-205ENST00000447267 CRHR2Q13324 411 aa7.06□□□□□ -1.28
SDCBP-205ENST00000447267 PPM1EQ8WY54 764 aa7.06□□□□□ -1.28
SDCBP-205ENST00000447267 ASB2Q96Q27 587 aa7.06□□□□□ -1.28
SDCBP-205ENST00000447267 SETDB2Q96T68 719 aa7.06□□□□□ -1.28
SDCBP-205ENST00000447267 ZFATQ9P243 1243 aa7.06□□□□□ -1.28
SDCBP-205ENST00000447267 LRFN2Q9ULH4 789 aa7.06□□□□□ -1.28
SDCBP-205ENST00000447267 SLC6A14Q9UN76 642 aa7.06□□□□□ -1.28
SDCBP-205ENST00000447267 COL5A3P25940 1745 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-205ENST00000447267 SNED1Q8TER0 1413 aa7.05□□□□□ -1.28
SDCBP-205ENST00000447267 SPATA31C1P0DKV0 1188 aa7.05□□□□□ -1.28
SDCBP-205ENST00000447267 NFKB1P19838 968 aa7.05□□□□□ -1.28
SDCBP-205ENST00000447267 NHLH1Q02575 133 aa7.05□□□□□ -1.28
SDCBP-205ENST00000447267 PLAURQ03405 335 aa7.05□□□□□ -1.28
SDCBP-205ENST00000447267 PTPN12Q05209 780 aaKnown RBP7.05□□□□□ -1.28
SDCBP-205ENST00000447267 TBC1D8BQ0IIM8 1120 aa7.05□□□□□ -1.28
SDCBP-205ENST00000447267 DOC2BQ14184 412 aa7.05□□□□□ -1.28
SDCBP-205ENST00000447267 FAM26DQ5JW98 314 aa7.05□□□□□ -1.28
SDCBP-205ENST00000447267 GGA3Q9NZ52 723 aa7.05□□□□□ -1.28
SDCBP-205ENST00000447267 BCORQ6W2J9 1755 aa7.05□□□□□ -1.28
SDCBP-205ENST00000447267 KLRG2A4D1S0 409 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-205ENST00000447267 FAM177BA6PVY3 158 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 OPLAHO14841 1288 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 GJB1P08034 283 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 CCL5P13501 91 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 RFX1P22670 979 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 ALDH1B1P30837 517 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 IDH3AP50213 366 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 FKBP1BP68106 108 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 PRKG1Q13976 671 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 KCTD2Q14681 263 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 TMC1Q8TDI8 760 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 ARHGAP39Q9C0H5 1083 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 RNF208Q9H0X6 261 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 TTYH1Q9H313 450 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-205ENST00000447267 IGFLR1Q9H665 355 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 C11orf16Q9NQ32 467 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 DNAJB12Q9NXW2 375 aaKnown RBP7.04□□□□□ -1.28
SDCBP-205ENST00000447267 USP20Q9Y2K6 914 aa7.04□□□□□ -1.28
SDCBP-205ENST00000447267 ZBTB42B2RXF5 422 aa7.03□□□□□ -1.28
SDCBP-205ENST00000447267 FKBP5Q13451 457 aaPredicted RBP7.03□□□□□ -1.28
SDCBP-205ENST00000447267 TNIP1Q15025 636 aa7.03□□□□□ -1.28
SDCBP-205ENST00000447267 GRIK4Q16099 956 aa7.03□□□□□ -1.28
SDCBP-205ENST00000447267 XP32Q5T750 250 aa7.03□□□□□ -1.28
SDCBP-205ENST00000447267 NBPF5PQ86XG9 351 aaPredicted RBP7.03□□□□□ -1.28
SDCBP-205ENST00000447267 U2AF1L4Q8WU68 220 aaKnown RBP7.03□□□□□ -1.28
SDCBP-205ENST00000447267 MYO19Q96H55 970 aa7.03□□□□□ -1.28
SDCBP-205ENST00000447267 COG3Q96JB2 828 aa7.03□□□□□ -1.28
SDCBP-205ENST00000447267 PRIMPOLQ96LW4 560 aa7.03□□□□□ -1.28
SDCBP-205ENST00000447267 SLC12A5Q9H2X9 1139 aa7.03□□□□□ -1.28
SDCBP-205ENST00000447267 NOVA2Q9UNW9 492 aaKnown RBP7.03□□□□□ -1.28
SDCBP-205ENST00000447267 YDJCA8MPS7 323 aa7.02□□□□□ -1.29
SDCBP-205ENST00000447267 CCINQ13939 588 aa7.02□□□□□ -1.29
SDCBP-205ENST00000447267 COL9A2Q14055 689 aaPredicted RBP7.02□□□□□ -1.29
SDCBP-205ENST00000447267 OCLNQ16625 522 aa7.02□□□□□ -1.29
SDCBP-205ENST00000447267 ANGEL2Q5VTE6 544 aaKnown RBP7.02□□□□□ -1.29
SDCBP-205ENST00000447267 CAPN12Q6ZSI9 719 aa7.02□□□□□ -1.29
SDCBP-205ENST00000447267 FAM200AQ8TCP9 573 aa7.02□□□□□ -1.29
SDCBP-205ENST00000447267 STK32AQ8WU08 396 aa7.02□□□□□ -1.29
SDCBP-205ENST00000447267 NUDT8Q8WV74 236 aa7.02□□□□□ -1.29
SDCBP-205ENST00000447267 ATXN2LQ8WWM7 1075 aaKnown RBP7.02□□□□□ -1.29
SDCBP-205ENST00000447267 IFT43Q96FT9 208 aa7.02□□□□□ -1.29
SDCBP-205ENST00000447267 PAWRQ96IZ0 340 aaKnown RBP7.02□□□□□ -1.29
SDCBP-205ENST00000447267 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.02□□□□□ -1.29
SDCBP-205ENST00000447267 TONSLQ96HA7 1378 aa7.02□□□□□ -1.29
SDCBP-205ENST00000447267 CDHR2Q9BYE9 1310 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 PSMD14O00487 310 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 MICAL2O94851 1124 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 TARSP26639 723 aaKnown RBP7.01□□□□□ -1.29
SDCBP-205ENST00000447267 AFF1P51825 1210 aaKnown RBP7.01□□□□□ -1.29
SDCBP-205ENST00000447267 EIF5P55010 431 aaKnown RBP7.01□□□□□ -1.29
SDCBP-205ENST00000447267 SLC39A6Q13433 755 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 TCIRG1Q13488 830 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 NEUROD1Q13562 356 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 GRIK5Q16478 980 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 HIF1AQ16665 826 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 PSAPL1Q6NUJ1 521 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 HDGFL2Q7Z4V5 671 aaPredicted RBP7.01□□□□□ -1.29
SDCBP-205ENST00000447267 DIS3LQ8TF46 1054 aaKnown RBP7.01□□□□□ -1.29
SDCBP-205ENST00000447267 SAP130Q9H0E3 1048 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 FZD1Q9UP38 647 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 KIF7Q2M1P5 1343 aa7.01□□□□□ -1.29
SDCBP-205ENST00000447267 A0A1W2PP64 1363 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 MANSC4A6NHS7 340 aaPredicted RBP7□□□□□ -1.29
SDCBP-205ENST00000447267 SMIM22K7EJ46 135 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 LILRB5O75023 590 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms