RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 ZNF746Q6NUN9 644 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P6-201ENST00000444896 ARHGAP27Q6ZUM4 889 aa7.06□□□□□ -1.28
HMGB3P6-201ENST00000444896 CKAP2LQ8IYA6 745 aa7.06□□□□□ -1.28
HMGB3P6-201ENST00000444896 FAM181AQ8N9Y4 354 aa7.06□□□□□ -1.28
HMGB3P6-201ENST00000444896 PIM2Q9P1W9 311 aa7.06□□□□□ -1.28
HMGB3P6-201ENST00000444896 PLAGL2Q9UPG8 496 aa7.06□□□□□ -1.28
HMGB3P6-201ENST00000444896 LEMD3Q9Y2U8 911 aa7.06□□□□□ -1.28
HMGB3P6-201ENST00000444896 CYP26A1O43174 497 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 SSTR4P31391 388 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 NKPD1Q17RQ9 610 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 TDRD10Q5VZ19 366 aaKnown RBP7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 PMFBP1Q8TBY8 1022 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 DHRS1Q96LJ7 313 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 ASPNQ9BXN1 380 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 PHAXQ9H814 394 aaKnown RBP7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 MKNK2Q9HBH9 465 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 LRRC4CQ9HCJ2 640 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 ST7Q9NRC1 585 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 PCMTD2Q9NV79 361 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 ZC3H7BQ9UGR2 993 aaKnown RBP7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 RNF112Q9ULX5 631 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 CAPN6Q9Y6Q1 641 aa7.05□□□□□ -1.28
HMGB3P6-201ENST00000444896 B2RBV5 119 aa7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 COBLO75128 1261 aa7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 FOSL1P15407 271 aa7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 KIR3DL1P43629 444 aa7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 TNK2Q07912 1038 aa7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 SERINC3Q13530 473 aa7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 NBPF9Q3BBW0 867 aa7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 AXDND1Q5T1B0 1012 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 NBPF6Q5VWK0 638 aa7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 LARP1BQ659C4 914 aaKnown RBP7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 C6orf15Q6UXA7 325 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 COX4I2Q96KJ9 171 aa7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 NBPF4Q96M43 638 aa7.04□□□□□ -1.28
HMGB3P6-201ENST00000444896 SHOXO15266 292 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 GJB6O95452 261 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 TP53P04637 393 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 SLC7A5Q01650 507 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 FXNQ16595 210 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 DDR2Q16832 855 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 GNPTABQ3T906 1256 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 ANKRD39Q53RE8 183 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 KIAA1211LQ6NV74 962 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 VHLLQ6RSH7 139 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 NBPF11Q86T75 865 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 SPACA3Q8IXA5 215 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 FAM178BQ8IXR5 827 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 PLD6Q8N2A8 252 aaKnown RBP7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 DTWD2Q8NBA8 298 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 LNPKQ9C0E8 428 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 FAM86C1Q9NVL1 165 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 R3HCC1Q9Y3T6 440 aaKnown RBP7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 ST14Q9Y5Y6 855 aa7.03□□□□□ -1.28
HMGB3P6-201ENST00000444896 MED26O95402 600 aa7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 CEACAM5P06731 702 aa7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 RNF4P78317 190 aa7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 SNW1Q13573 536 aaKnown RBP7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 SOGA3Q5TF21 947 aa7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 DCAF15Q66K64 600 aa7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 MRM1Q6IN84 353 aaKnown RBP7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 INTS5Q6P9B9 1019 aaKnown RBP7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 MFSD4AQ8N468 514 aa7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 MKRN2Q9H000 416 aaKnown RBP7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 SUSD2Q9UGT4 822 aa7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 MSRB2Q9Y3D2 182 aa7.02□□□□□ -1.29
HMGB3P6-201ENST00000444896 GNAT3A8MTJ3 354 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 CBFA2T2O43439 604 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 DDAH1O94760 285 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 SRFP11831 508 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 ITIH2P19823 946 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 CHMP4BP1P59074 171 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 AUHQ13825 339 aaKnown RBP7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 LRP8Q14114 963 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 MSMPQ1L6U9 139 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 BBS9Q3SYG4 887 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 CCDC144CPQ8IYA2 1237 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 C7orf61Q8IZ16 206 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 SMARCC1Q92922 1105 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 TRIM55Q9BYV6 548 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 PRDM14Q9GZV8 571 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 DUSP15Q9H1R2 295 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 ZFP64Q9NPA5 681 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 SIRPGQ9P1W8 387 aa7.01□□□□□ -1.29
HMGB3P6-201ENST00000444896 NCAPHQ15003 741 aa7□□□□□ -1.29
HMGB3P6-201ENST00000444896 DPH6Q7L8W6 267 aa7□□□□□ -1.29
HMGB3P6-201ENST00000444896 PIWIL2Q8TC59 973 aaKnown RBP7□□□□□ -1.29
HMGB3P6-201ENST00000444896 NETO1Q8TDF5 533 aa7□□□□□ -1.29
HMGB3P6-201ENST00000444896 GPR62Q9BZJ7 368 aa7□□□□□ -1.29
HMGB3P6-201ENST00000444896 SEMA3GQ9NS98 782 aa7□□□□□ -1.29
HMGB3P6-201ENST00000444896 KCNH3Q9ULD8 1083 aa7□□□□□ -1.29
HMGB3P6-201ENST00000444896 ZNF451Q9Y4E5 1061 aa7□□□□□ -1.29
HMGB3P6-201ENST00000444896 SHISA3A0PJX4 238 aa6.99□□□□□ -1.29
HMGB3P6-201ENST00000444896 WASH4PA8MWX3 477 aa6.99□□□□□ -1.29
HMGB3P6-201ENST00000444896 CD247P20963 164 aa6.99□□□□□ -1.29
HMGB3P6-201ENST00000444896 IFI16Q16666 785 aaKnown RBP6.99□□□□□ -1.29
HMGB3P6-201ENST00000444896 CDKAL1Q5VV42 579 aa6.99□□□□□ -1.29
HMGB3P6-201ENST00000444896 TMC3Q7Z5M5 1100 aa6.99□□□□□ -1.29
HMGB3P6-201ENST00000444896 ZNF513Q8N8E2 541 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P6-201ENST00000444896 HSPA12BQ96MM6 686 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms