RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 PANX2Q96RD6 677 aa18.92■□□□□ 0.62
PMS1-213ENST00000441310 PIH1D3Q9NQM4 214 aaKnown RBP18.92■□□□□ 0.62
PMS1-213ENST00000441310 ERVV-1B6SEH8 477 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 AGPSO00116 658 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 ENC1O14682 589 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 USP14P54578 494 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 CCDC102BQ68D86 513 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 DENND2AQ9ULE3 1009 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 EIF3HO15372 352 aaKnown RBP eCLIP18.91■□□□□ 0.62
PMS1-213ENST00000441310 FOXP2O15409 715 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 NEBLO76041 1014 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 EXOSC10Q01780 885 aaKnown RBP18.91■□□□□ 0.62
PMS1-213ENST00000441310 PPFIA1Q13136 1202 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 SLC39A14Q15043 492 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 BRAPQ7Z569 592 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 CCDC24Q8N4L8 307 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 MIEF2Q96C03 454 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 CAPZA3Q96KX2 299 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 HDAC6Q9UBN7 1215 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 WTIPA6NIX2 430 aaPredicted RBP18.91■□□□□ 0.62
PMS1-213ENST00000441310 GPAA1O43292 621 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 NF2P35240 595 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 EGFL6Q8IUX8 553 aa18.91■□□□□ 0.62
PMS1-213ENST00000441310 SPATA31A5Q5VU36 1347 aa18.9■□□□□ 0.62
PMS1-213ENST00000441310 SPATA31A7Q8IWB4 1347 aa18.9■□□□□ 0.62
PMS1-213ENST00000441310 NDUFAB1O14561 156 aa18.9■□□□□ 0.62
PMS1-213ENST00000441310 MYBL2P10244 700 aa18.9■□□□□ 0.62
PMS1-213ENST00000441310 ZNF18P17022 549 aa18.9■□□□□ 0.62
PMS1-213ENST00000441310 RASGRP2Q7LDG7 609 aa18.9■□□□□ 0.62
PMS1-213ENST00000441310 GOLGA6BA6NDN3 693 aa18.9■□□□□ 0.62
PMS1-213ENST00000441310 NR1I3Q14994 352 aa18.9■□□□□ 0.62
PMS1-213ENST00000441310 STK11IPQ8N1F8 1099 aa18.9■□□□□ 0.62
PMS1-213ENST00000441310 SELENOOQ9BVL4 669 aa18.9■□□□□ 0.62
PMS1-213ENST00000441310 HPSEQ9Y251 543 aa18.9■□□□□ 0.62
PMS1-213ENST00000441310 RFX7Q2KHR2 1363 aa18.89■□□□□ 0.62
PMS1-213ENST00000441310 PAX7P23759 505 aa18.89■□□□□ 0.62
PMS1-213ENST00000441310 CASP14P31944 242 aa18.89■□□□□ 0.62
PMS1-213ENST00000441310 ACTN3Q08043 901 aaPredicted RBP18.89■□□□□ 0.62
PMS1-213ENST00000441310 VGLL2Q8N8G2 317 aa18.89■□□□□ 0.62
PMS1-213ENST00000441310 ZNF274Q96GC6 653 aaPredicted RBP18.89■□□□□ 0.62
PMS1-213ENST00000441310 VEZTQ9HBM0 779 aa18.89■□□□□ 0.62
PMS1-213ENST00000441310 FBXO3Q9UK99 471 aa18.89■□□□□ 0.62
PMS1-213ENST00000441310 WWC3Q9ULE0 1092 aa18.89■□□□□ 0.62
PMS1-213ENST00000441310 GRIN2DO15399 1336 aa18.89■□□□□ 0.61
PMS1-213ENST00000441310 SRGAP2O75044 1071 aa18.89■□□□□ 0.61
PMS1-213ENST00000441310 CAMTA2O94983 1202 aa18.89■□□□□ 0.61
PMS1-213ENST00000441310 KIF23Q02241 960 aaPredicted RBP18.89■□□□□ 0.61
PMS1-213ENST00000441310 POLD4Q9HCU8 107 aa18.89■□□□□ 0.61
PMS1-213ENST00000441310 MAN1B1Q9UKM7 699 aa18.89■□□□□ 0.61
PMS1-213ENST00000441310 FNTAP49354 379 aa18.89■□□□□ 0.61
PMS1-213ENST00000441310 TRDNQ13061 729 aa18.89■□□□□ 0.61
PMS1-213ENST00000441310 APPBP2Q92624 585 aa18.89■□□□□ 0.61
PMS1-213ENST00000441310 MMS19Q96T76 1030 aa18.89■□□□□ 0.61
PMS1-213ENST00000441310 CDCA7Q9BWT1 371 aaPredicted RBP18.89■□□□□ 0.61
PMS1-213ENST00000441310 CPLX1O14810 134 aa18.88■□□□□ 0.61
PMS1-213ENST00000441310 C21orf2O43822 256 aa18.88■□□□□ 0.61
PMS1-213ENST00000441310 MCM8Q9UJA3 840 aa18.88■□□□□ 0.61
PMS1-213ENST00000441310 ODF2LQ9ULJ1 636 aa18.88■□□□□ 0.61
PMS1-213ENST00000441310 GUCA1BQ9UMX6 200 aa18.88■□□□□ 0.61
PMS1-213ENST00000441310 TTF2Q9UNY4 1162 aaKnown RBP18.88■□□□□ 0.61
PMS1-213ENST00000441310 UBAP1LF5GYI3 381 aa18.88■□□□□ 0.61
PMS1-213ENST00000441310 CHUKO15111 745 aa18.88■□□□□ 0.61
PMS1-213ENST00000441310 STAG1Q8WVM7 1258 aa18.88■□□□□ 0.61
PMS1-213ENST00000441310 AIFM3Q96NN9 605 aa18.88■□□□□ 0.61
PMS1-213ENST00000441310 TRIM10Q9UDY6 481 aa18.88■□□□□ 0.61
PMS1-213ENST00000441310 KCNH3Q9ULD8 1083 aa18.88■□□□□ 0.61
PMS1-213ENST00000441310 FRMD3A2A2Y4 597 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 PPP1R12AO14974 1030 aaPredicted RBP18.87■□□□□ 0.61
PMS1-213ENST00000441310 GRAMD1CQ8IYS0 662 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 SLF1Q9BQI6 1058 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 NAA15Q9BXJ9 866 aaKnown RBP18.87■□□□□ 0.61
PMS1-213ENST00000441310 NBPF3Q9H094 633 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 A1CFQ9NQ94 594 aaKnown RBP18.87■□□□□ 0.61
PMS1-213ENST00000441310 INCENPQ9NQS7 918 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.87■□□□□ 0.61
PMS1-213ENST00000441310 STX17P56962 302 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 AMPD2Q01433 879 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 PDCLQ13371 301 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 RNF187Q5TA31 235 aaPredicted RBP18.87■□□□□ 0.61
PMS1-213ENST00000441310 KLHL10Q6JEL2 608 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 MED15Q96RN5 788 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 BCCIPQ9P287 314 aaKnown RBP eCLIP18.87■□□□□ 0.61
PMS1-213ENST00000441310 BCAMP50895 628 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 IMMTQ16891 758 aaKnown RBP18.87■□□□□ 0.61
PMS1-213ENST00000441310 NKX2-3Q8TAU0 364 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.87■□□□□ 0.61
PMS1-213ENST00000441310 AGXT2Q9BYV1 514 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 ZNF532Q9HCE3 1301 aa18.87■□□□□ 0.61
PMS1-213ENST00000441310 NUP98P52948 1817 aa18.86■□□□□ 0.61
PMS1-213ENST00000441310 DOT1LQ8TEK3 1739 aa18.86■□□□□ 0.61
PMS1-213ENST00000441310 MFAP3LO75121 409 aa18.86■□□□□ 0.61
PMS1-213ENST00000441310 DDR1Q08345 913 aa18.86■□□□□ 0.61
PMS1-213ENST00000441310 ANKRD18AQ8IVF6 992 aa18.86■□□□□ 0.61
PMS1-213ENST00000441310 SGSM3Q96HU1 749 aa18.86■□□□□ 0.61
PMS1-213ENST00000441310 GOLGA8BA8MQT2 603 aa18.86■□□□□ 0.61
PMS1-213ENST00000441310 TOM1O60784 492 aa18.86■□□□□ 0.61
PMS1-213ENST00000441310 FXR1P51114 621 aaKnown RBP eCLIP18.86■□□□□ 0.61
PMS1-213ENST00000441310 NAIF1Q69YI7 327 aaPredicted RBP18.86■□□□□ 0.61
PMS1-213ENST00000441310 CEP57Q86XR8 500 aa18.86■□□□□ 0.61
PMS1-213ENST00000441310 JMYQ8N9B5 988 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms