RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 FBXL16Q8N461 479 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 NCOA7Q8NI08 942 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 NSUN4Q96CB9 384 aaKnown RBP4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 CRNKL1Q9BZJ0 848 aaKnown RBP4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 KRT23Q9C075 422 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 NAPBQ9H115 298 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 RNF41Q9H4P4 317 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 CNNM2Q9H8M5 875 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 ARMT1Q9H993 441 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 CD209Q9NNX6 404 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 TMPRSS4Q9NRS4 437 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 ATP8A2Q9NTI2 1148 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 POLLQ9UGP5 575 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 PCDHB11Q9Y5F2 797 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 SLC4A4Q9Y6R1 1079 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 CACNA1SQ13698 1873 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 FAM205AQ6ZU69 1335 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 DLEC1Q9Y238 1755 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 SLX4Q8IY92 1834 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 C10orf71Q711Q0 1435 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 USP17L3A6NCW0 530 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 USP17L4A6NCW7 530 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 USP17L5A8MUK1 530 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 GSG1L2A8MUP6 293 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 ERVH48-1M5A8F1 160 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 FOXP2O15409 715 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 ATP9BO43861 1147 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 DHX16O60231 1041 aaKnown RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 AVPP01185 164 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 CHGBP05060 677 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 SLC3A2P08195 630 aaKnown RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 PDCP20941 246 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 KLRK1P26718 216 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 LMOD1P29536 600 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 TDO2P48775 406 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 FKBP1AP62942 108 aaKnown RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 SART3Q15020 963 aaKnown RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 OXLD1Q5BKU9 147 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 PPP1R26Q5T8A7 1209 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 TTLL5Q6EMB2 1281 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 USP17L2Q6R6M4 530 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 MFSD6Q6ZSS7 791 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 Q6ZUG5 572 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 USP17L1Q7RTZ2 530 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 PODNQ7Z5L7 613 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 TXNRD3Q86VQ6 643 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 AMOTL1Q8IY63 956 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 RTKN2Q8IZC4 609 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 TTLL6Q8N841 843 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 MIGA1Q8NAN2 632 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 PLPP7Q8NBV4 271 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 ZNF274Q96GC6 653 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 GBP4Q96PP9 640 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 RIOK1Q9BRS2 568 aaKnown RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 LLPHQ9BRT6 129 aaKnown RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 MTA3Q9BTC8 594 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 ANP32EQ9BTT0 268 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 KLF16Q9BXK1 252 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 RTFDC1Q9BY42 306 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 MTFR1LQ9H019 292 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 VPS33BQ9H267 617 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 ANAPC4Q9UJX5 808 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 SERPINA10Q9UK55 444 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 SMC3Q9UQE7 1217 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 KIF3AQ9Y496 699 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 MAFBQ9Y5Q3 323 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 COL1A1P02452 1464 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 KIF13BQ9NQT8 1826 aa4.67□□□□□ -1.66
HMGB1P37-201ENST00000439613 BAZ2AQ9UIF9 1905 aaKnown RBP4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 GOLGA6L22H0YM25 854 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 PRC1O43663 620 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 PFKFB2O60825 505 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 CPA1P15085 419 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 PRDX5P30044 214 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 CHRNA5P30532 468 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 SCTRP47872 440 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 WDR4P57081 412 aaKnown RBP4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 EVCP57679 992 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 HAND2P61296 217 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 TGFB2P61812 414 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 PPARAQ07869 468 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 NCOA4Q13772 614 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 TOB2Q14106 344 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 RAB3GAP1Q15042 981 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 NFKBIBQ15653 356 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 MAP7D1Q3KQU3 841 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 SBK1Q52WX2 424 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 MFSD14BQ5SR56 506 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 AKNAD1Q5T1N1 836 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 CLEC17AQ6ZS10 378 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 STOX1Q6ZVD7 989 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 NOL8Q76FK4 1167 aaKnown RBP4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 MB21D2Q8IYB1 491 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 TMTC2Q8N394 836 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 LCORLQ8N3X6 602 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 STAG1Q8WVM7 1258 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 C7orf43Q8WVR3 580 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 TMEM87BQ96K49 555 aa4.66□□□□□ -1.66
HMGB1P37-201ENST00000439613 PSMD1Q99460 953 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms