RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 GOLGA5Q8TBA6 731 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 RABGGTAQ92696 567 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 DSCC1Q9BVC3 393 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 HSD3B7Q9H2F3 369 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 TYW1Q9NV66 732 aaKnown RBP9.19□□□□□ -0.94
VTI1A-202ENST00000432306 MAP3K20Q9NYL2 800 aaKnown RBP9.19□□□□□ -0.94
VTI1A-202ENST00000432306 PCDHA7Q9UN72 937 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 TOGARAM1Q9Y4F4 1720 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 PALLDQ8WX93 1383 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 MAP3K15Q6ZN16 1313 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 MEGF6O75095 1541 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 CCDC151A5D8V7 595 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 RCCD1A6NED2 376 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 GRM8O00222 908 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 ZSCAN12O43309 604 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 CYP21A2P08686 494 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 VIL1P09327 827 aaKnown RBP9.19□□□□□ -0.94
VTI1A-202ENST00000432306 G3BP1Q13283 466 aaKnown RBP eCLIP9.19□□□□□ -0.94
VTI1A-202ENST00000432306 DIXDC1Q155Q3 683 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 LDLRAD1Q5T700 205 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 ICE2Q659A1 982 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 NUDT18Q6ZVK8 323 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 TMEM139Q8IV31 216 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 FBXO18Q8NFZ0 1043 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 CEP63Q96MT8 703 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 FSD1Q9BTV5 496 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 COPRSQ9NQ92 184 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 CWC15Q9P013 229 aaKnown RBP9.19□□□□□ -0.94
VTI1A-202ENST00000432306 FRMD4BQ9Y2L6 1034 aa9.19□□□□□ -0.94
VTI1A-202ENST00000432306 PTPDC1A2A3K4 754 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 ERICH4A6NGS2 130 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 SASH3O75995 380 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 PDGFRBP09619 1106 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 USP5P45974 858 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 TUBB2AQ13885 445 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 BRD3Q15059 726 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 DPCR1Q3MIW9 517 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 PPP1R18Q6NYC8 613 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 TMC6Q7Z403 805 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 BRAPQ7Z569 592 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 HELBQ8NG08 1087 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-202ENST00000432306 SMARCC1Q92922 1105 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-202ENST00000432306 ASB16Q96NS5 453 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 PAGR1Q9BTK6 254 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 TUBB2BQ9BVA1 445 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 FUT8Q9BYC5 575 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 INO80BQ9C086 356 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-202ENST00000432306 IFNKQ9P0W0 207 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 SFMBT1Q9UHJ3 866 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 MRFAP1Q9Y605 127 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 CARMIL3Q8ND23 1372 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 ADAMTS7Q9UKP4 1686 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 ARFGEF1Q9Y6D6 1849 aa9.18□□□□□ -0.94
VTI1A-202ENST00000432306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.17□□□□□ -0.94
VTI1A-202ENST00000432306 VWA3AA6NCI4 1184 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 ZNF609O15014 1411 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 CD53P19397 219 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 CMA1P23946 247 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 BRCA1P38398 1863 aaKnown RBP9.17□□□□□ -0.94
VTI1A-202ENST00000432306 FANCCQ00597 558 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 POU5F1BQ06416 359 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 FSTL1Q12841 308 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 TBX2Q13207 712 aaPredicted RBP9.17□□□□□ -0.94
VTI1A-202ENST00000432306 SMC1AQ14683 1233 aaKnown RBP9.17□□□□□ -0.94
VTI1A-202ENST00000432306 MCMDC2Q4G0Z9 681 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 VSTM4Q8IW00 320 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 MNS1Q8NEH6 495 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 SMARCE1Q969G3 411 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 RELTQ969Z4 430 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 SUCLG2Q96I99 432 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 TCEANC2Q96MN5 208 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 TSPAN18Q96SJ8 248 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 C9orf78Q9NZ63 289 aaPredicted RBP9.17□□□□□ -0.94
VTI1A-202ENST00000432306 PA2G4Q9UQ80 394 aaKnown RBP9.17□□□□□ -0.94
VTI1A-202ENST00000432306 PKD1L3Q7Z443 1732 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 KIAA1551Q9HCM1 1747 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 ENPP3O14638 875 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 STX10O60499 249 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 TUBBP07437 444 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 OAS2P29728 719 aaKnown RBP9.17□□□□□ -0.94
VTI1A-202ENST00000432306 VAC14Q08AM6 782 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 STK3Q13188 491 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 ZSCAN26Q16670 478 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 EAPPQ56P03 285 aaPredicted RBP9.17□□□□□ -0.94
VTI1A-202ENST00000432306 AXDND1Q5T1B0 1012 aaPredicted RBP9.17□□□□□ -0.94
VTI1A-202ENST00000432306 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 RAPGEF4Q8WZA2 1011 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 TATDN2Q93075 761 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 KIFC2Q96AC6 838 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 DDX11Q96FC9 970 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 ZNF512BQ96KM6 892 aaPredicted RBP9.17□□□□□ -0.94
VTI1A-202ENST00000432306 FRMD6Q96NE9 622 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 HAUS7Q99871 368 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 SDF4Q9BRK5 362 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 RASSF4Q9H2L5 321 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 ARFGAP3Q9NP61 516 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 NMRK2Q9NPI5 230 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 HELLSQ9NRZ9 838 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 RAB21Q9UL25 225 aa9.17□□□□□ -0.94
VTI1A-202ENST00000432306 PNMA3Q9UL41 463 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms