RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 FAM221AA4D161 298 aa8.24□□□□□ -1.09
LINC00458-202ENST00000427299 PRRG2O14669 202 aa8.24□□□□□ -1.09
LINC00458-202ENST00000427299 NUAK1O60285 661 aa8.24□□□□□ -1.09
LINC00458-202ENST00000427299 INHBBP09529 407 aa8.24□□□□□ -1.09
LINC00458-202ENST00000427299 EAPPQ56P03 285 aaPredicted RBP8.24□□□□□ -1.09
LINC00458-202ENST00000427299 BNC2Q6ZN30 1099 aaPredicted RBP8.24□□□□□ -1.09
LINC00458-202ENST00000427299 MCOLN1Q9GZU1 580 aa8.24□□□□□ -1.09
LINC00458-202ENST00000427299 SLC6A17Q9H1V8 727 aa8.24□□□□□ -1.09
LINC00458-202ENST00000427299 DCAF1Q9Y4B6 1507 aa8.24□□□□□ -1.09
LINC00458-202ENST00000427299 TAF1CQ15572 869 aaPredicted RBP8.23□□□□□ -1.09
LINC00458-202ENST00000427299 DHX38Q92620 1227 aaKnown RBP8.23□□□□□ -1.09
LINC00458-202ENST00000427299 CWC22Q9HCG8 908 aaKnown RBP8.23□□□□□ -1.09
LINC00458-202ENST00000427299 YBX2Q9Y2T7 364 aaKnown RBP8.23□□□□□ -1.09
LINC00458-202ENST00000427299 PRR36Q9H6K5 1346 aa8.23□□□□□ -1.09
LINC00458-202ENST00000427299 MYOCOSA0A1B0GUC4 107 aa8.22□□□□□ -1.09
LINC00458-202ENST00000427299 RBM47A0AV96 593 aaKnown RBP8.22□□□□□ -1.09
LINC00458-202ENST00000427299 ANKRD33BA6NCL7 494 aa8.22□□□□□ -1.09
LINC00458-202ENST00000427299 PEX10O60683 326 aa8.22□□□□□ -1.09
LINC00458-202ENST00000427299 CTSHP09668 335 aa8.22□□□□□ -1.09
LINC00458-202ENST00000427299 INTS4Q96HW7 963 aaKnown RBP8.22□□□□□ -1.09
LINC00458-202ENST00000427299 PARP2Q9UGN5 583 aa8.22□□□□□ -1.09
LINC00458-202ENST00000427299 EBF1Q9UH73 591 aa8.22□□□□□ -1.09
LINC00458-202ENST00000427299 SHISA3A0PJX4 238 aa8.21□□□□□ -1.1
LINC00458-202ENST00000427299 SEMA7AO75326 666 aa8.21□□□□□ -1.1
LINC00458-202ENST00000427299 BPNT1O95861 308 aa8.21□□□□□ -1.1
LINC00458-202ENST00000427299 DLG4P78352 724 aa8.21□□□□□ -1.1
LINC00458-202ENST00000427299 DAB2P98082 770 aa8.21□□□□□ -1.1
LINC00458-202ENST00000427299 TEKQ02763 1124 aa8.21□□□□□ -1.1
LINC00458-202ENST00000427299 LMNB2Q03252 620 aa8.21□□□□□ -1.1
LINC00458-202ENST00000427299 GATAD2BQ8WXI9 593 aa8.21□□□□□ -1.1
LINC00458-202ENST00000427299 KREMEN1Q96MU8 473 aa8.21□□□□□ -1.1
LINC00458-202ENST00000427299 ASPNQ9BXN1 380 aa8.21□□□□□ -1.1
LINC00458-202ENST00000427299 ZNF281Q9Y2X9 895 aa8.21□□□□□ -1.1
LINC00458-202ENST00000427299 ZBTB7CA1YPR0 619 aa8.2□□□□□ -1.1
LINC00458-202ENST00000427299 B8ZZF3 427 aa8.2□□□□□ -1.1
LINC00458-202ENST00000427299 F13A1P00488 732 aa8.2□□□□□ -1.1
LINC00458-202ENST00000427299 CAMK2GQ13555 558 aaPredicted RBP8.2□□□□□ -1.1
LINC00458-202ENST00000427299 DIEXFQ68CQ4 756 aaKnown RBP8.2□□□□□ -1.1
LINC00458-202ENST00000427299 ZNF605Q86T29 641 aa8.2□□□□□ -1.1
LINC00458-202ENST00000427299 SHISA4Q96DD7 197 aa8.2□□□□□ -1.1
LINC00458-202ENST00000427299 IRF2BPLQ9H1B7 796 aa8.2□□□□□ -1.1
LINC00458-202ENST00000427299 REV1Q9UBZ9 1251 aa8.2□□□□□ -1.1
LINC00458-202ENST00000427299 USP31Q70CQ4 1352 aa8.2□□□□□ -1.1
LINC00458-202ENST00000427299 F6X3S4 739 aa8.19□□□□□ -1.1
LINC00458-202ENST00000427299 CHRNEQ04844 493 aa8.19□□□□□ -1.1
LINC00458-202ENST00000427299 PSMD2Q13200 908 aa8.19□□□□□ -1.1
LINC00458-202ENST00000427299 SNX17Q15036 470 aa8.19□□□□□ -1.1
LINC00458-202ENST00000427299 SPPL2CQ8IUH8 684 aa8.19□□□□□ -1.1
LINC00458-202ENST00000427299 AEBP1Q8IUX7 1158 aa8.19□□□□□ -1.1
LINC00458-202ENST00000427299 BAHD1Q8TBE0 780 aaPredicted RBP8.19□□□□□ -1.1
LINC00458-202ENST00000427299 LINC01599Q8WXQ3 324 aa8.19□□□□□ -1.1
LINC00458-202ENST00000427299 RHOVQ96L33 236 aa8.19□□□□□ -1.1
LINC00458-202ENST00000427299 ZNF552Q9H707 407 aaPredicted RBP8.19□□□□□ -1.1
LINC00458-202ENST00000427299 PODXL2Q9NZ53 605 aa8.19□□□□□ -1.1
LINC00458-202ENST00000427299 POLR3KQ9Y2Y1 108 aaPredicted RBP8.19□□□□□ -1.1
LINC00458-202ENST00000427299 CHURC1-FNTBB4DL54 471 aa8.18□□□□□ -1.1
LINC00458-202ENST00000427299 PF4P02776 101 aa8.18□□□□□ -1.1
LINC00458-202ENST00000427299 TNNI2P48788 182 aa8.18□□□□□ -1.1
LINC00458-202ENST00000427299 DUSP4Q13115 394 aa8.18□□□□□ -1.1
LINC00458-202ENST00000427299 ANKS4BQ8N8V4 417 aa8.18□□□□□ -1.1
LINC00458-202ENST00000427299 SYTL4Q96C24 671 aaPredicted RBP8.18□□□□□ -1.1
LINC00458-202ENST00000427299 G6PC3Q9BUM1 346 aa8.18□□□□□ -1.1
LINC00458-202ENST00000427299 GCM1Q9NP62 436 aa8.18□□□□□ -1.1
LINC00458-202ENST00000427299 GPR160Q9UJ42 338 aa8.18□□□□□ -1.1
LINC00458-202ENST00000427299 TEX51A0A1B0GUA7 166 aa8.17□□□□□ -1.1
LINC00458-202ENST00000427299 NOTOA8MTQ0 251 aa8.17□□□□□ -1.1
LINC00458-202ENST00000427299 PATL2C9JE40 543 aaKnown RBP8.17□□□□□ -1.1
LINC00458-202ENST00000427299 DNAJA2O60884 412 aa8.17□□□□□ -1.1
LINC00458-202ENST00000427299 HTR3BO95264 441 aa8.17□□□□□ -1.1
LINC00458-202ENST00000427299 BUD31P41223 144 aaPredicted RBP8.17□□□□□ -1.1
LINC00458-202ENST00000427299 TMC4Q7Z404 712 aa8.17□□□□□ -1.1
LINC00458-202ENST00000427299 VWCEQ96DN2 955 aa8.17□□□□□ -1.1
LINC00458-202ENST00000427299 C20orf173Q96LM9 149 aa8.17□□□□□ -1.1
LINC00458-202ENST00000427299 CCDC74BQ96LY2 380 aa8.17□□□□□ -1.1
LINC00458-202ENST00000427299 KRTAP9-3Q9BYQ3 159 aa8.17□□□□□ -1.1
LINC00458-202ENST00000427299 KLHL3Q9UH77 587 aa8.17□□□□□ -1.1
LINC00458-202ENST00000427299 PSPNO60542 156 aa8.16□□□□□ -1.1
LINC00458-202ENST00000427299 EFEMP2O95967 443 aa8.16□□□□□ -1.1
LINC00458-202ENST00000427299 HOXA5P20719 270 aa8.16□□□□□ -1.1
LINC00458-202ENST00000427299 CTSWP56202 376 aa8.16□□□□□ -1.1
LINC00458-202ENST00000427299 PDE6BP35913 854 aa8.15□□□□□ -1.1
LINC00458-202ENST00000427299 CRELD1Q96HD1 420 aa8.15□□□□□ -1.1
LINC00458-202ENST00000427299 FAM161BQ96MY7 647 aa8.15□□□□□ -1.1
LINC00458-202ENST00000427299 TMEM74Q96NL1 305 aa8.15□□□□□ -1.1
LINC00458-202ENST00000427299 GRIN3BO60391 1043 aa8.14□□□□□ -1.11
LINC00458-202ENST00000427299 GALK1P51570 392 aa8.14□□□□□ -1.11
LINC00458-202ENST00000427299 CLEC16AQ2KHT3 1053 aa8.14□□□□□ -1.11
LINC00458-202ENST00000427299 SND1Q7KZF4 910 aaKnown RBP eCLIP8.14□□□□□ -1.11
LINC00458-202ENST00000427299 NLRX1Q86UT6 975 aa8.14□□□□□ -1.11
LINC00458-202ENST00000427299 ENOX1Q8TC92 643 aaKnown RBP8.14□□□□□ -1.11
LINC00458-202ENST00000427299 SGPP1Q9BX95 441 aa8.14□□□□□ -1.11
LINC00458-202ENST00000427299 PARD6AQ9NPB6 346 aa8.14□□□□□ -1.11
LINC00458-202ENST00000427299 NMIQ13287 307 aaPredicted RBP8.13□□□□□ -1.11
LINC00458-202ENST00000427299 RNF111Q6ZNA4 994 aa8.13□□□□□ -1.11
LINC00458-202ENST00000427299 PHACTR4Q8IZ21 702 aa8.13□□□□□ -1.11
LINC00458-202ENST00000427299 SYTL5Q8TDW5 730 aaPredicted RBP8.13□□□□□ -1.11
LINC00458-202ENST00000427299 KIF2CQ99661 725 aa8.13□□□□□ -1.11
LINC00458-202ENST00000427299 RSRP1Q9BUV0 290 aa8.13□□□□□ -1.11
LINC00458-202ENST00000427299 HDAC8Q9BY41 377 aa8.13□□□□□ -1.11
LINC00458-202ENST00000427299 CNOT6Q9ULM6 557 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms