RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 TANGO6Q9C0B7 1094 aa14.81□□□□□ -0.04
SMIM12-203ENST00000426886 IGKV6D-41A0A0C4DH26 115 aa14.8□□□□□ -0.04
SMIM12-203ENST00000426886 OSBPP22059 807 aa14.8□□□□□ -0.04
SMIM12-203ENST00000426886 ANKRD13CQ8N6S4 541 aa14.8□□□□□ -0.04
SMIM12-203ENST00000426886 ESR2Q92731 530 aa14.8□□□□□ -0.04
SMIM12-203ENST00000426886 SH2D4AQ9H788 454 aa14.8□□□□□ -0.04
SMIM12-203ENST00000426886 VCPKMTQ9H867 229 aa14.8□□□□□ -0.04
SMIM12-203ENST00000426886 CASP8AP2Q9UKL3 1982 aa14.8□□□□□ -0.04
SMIM12-203ENST00000426886 PABPC4Q13310 644 aaKnown RBP eCLIP14.8□□□□□ -0.043e-6■□□□□ 9.9
SMIM12-203ENST00000426886 NYAP2Q9P242 653 aa14.8□□□□□ -0.04
SMIM12-203ENST00000426886 MYH8P13535 1937 aa14.8□□□□□ -0.04
SMIM12-203ENST00000426886 F5H6K3 240 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 FKTNO75072 461 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 SP3Q02447 781 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 KLRC3Q07444 240 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 CHST3Q7LGC8 479 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 ZCCHC17Q9NP64 241 aaKnown RBP14.79□□□□□ -0.04
SMIM12-203ENST00000426886 ZSWIM5Q9P217 1185 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 PNMA3Q9UL41 463 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 LAMB1P07942 1786 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 CD99L2Q8TCZ2 262 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 CFHR5Q9BXR6 569 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 GOPCQ9HD26 462 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 USP17L15C9J2P7 530 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 USP17L13C9JLJ4 530 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 USP17L11C9JVI0 530 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 USP17L18D6R9N7 530 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 USP17L22D6RA61 530 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 USP17L17D6RBQ6 530 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 USP17L19D6RCP7 530 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 USP17L20D6RJB6 530 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 E7EWF7 191 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 USP17L24Q0WX57 530 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 TRDNQ13061 729 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 FAM83BQ5T0W9 1011 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 STOX1Q6ZVD7 989 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 C12orf42Q96LP6 360 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 PAGR1Q9BTK6 254 aa14.79□□□□□ -0.04
SMIM12-203ENST00000426886 HTTP42858 3142 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 HOXA7P31268 230 aaPredicted RBP14.78□□□□□ -0.04
SMIM12-203ENST00000426886 CAP1Q01518 475 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 C17orf99Q6UX52 265 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 CATSPERGQ6ZRH7 1159 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 RASGRP2Q7LDG7 609 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 ARHGAP39Q9C0H5 1083 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 PRDM10Q9NQV6 1147 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 SLC45A1Q9Y2W3 748 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 BRCA2P51587 3418 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 PTPRFP10586 1907 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 SLC27A2O14975 620 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 FLOT1O75955 427 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 NDUFB10O96000 172 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 PCP11498 1178 aaKnown RBP14.78□□□□□ -0.04
SMIM12-203ENST00000426886 MCCP23508 829 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 HERVK_113P62684 666 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 CREB3L3Q68CJ9 461 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 KRT23Q9C075 422 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 FBXO28Q9NVF7 368 aa14.78□□□□□ -0.04
SMIM12-203ENST00000426886 NECTIN1Q15223 517 aa14.77□□□□□ -0.04
SMIM12-203ENST00000426886 RALYLQ86SE5 291 aaKnown RBP14.77□□□□□ -0.04
SMIM12-203ENST00000426886 IQCA1Q86XH1 822 aa14.77□□□□□ -0.04
SMIM12-203ENST00000426886 COL9A3Q14050 684 aaPredicted RBP14.77□□□□□ -0.05
SMIM12-203ENST00000426886 SLFN13Q68D06 897 aa14.77□□□□□ -0.05
SMIM12-203ENST00000426886 CYB5R4Q7L1T6 521 aa14.77□□□□□ -0.05
SMIM12-203ENST00000426886 LPAR1Q92633 364 aa14.77□□□□□ -0.05
SMIM12-203ENST00000426886 MKL1Q969V6 931 aa14.77□□□□□ -0.05
SMIM12-203ENST00000426886 CNNM2Q9H8M5 875 aa14.77□□□□□ -0.05
SMIM12-203ENST00000426886 TXNRD2Q9NNW7 524 aa14.77□□□□□ -0.05
SMIM12-203ENST00000426886 TMEM47Q9BQJ4 181 aa14.76□□□□□ -0.05
SMIM12-203ENST00000426886 PLIN4Q96Q06 1357 aa14.76□□□□□ -0.05
SMIM12-203ENST00000426886 POTEEQ6S8J3 1075 aa14.76□□□□□ -0.05
SMIM12-203ENST00000426886 ZSCAN10Q96SZ4 725 aaPredicted RBP14.76□□□□□ -0.05
SMIM12-203ENST00000426886 UBAC1Q9BSL1 405 aa14.76□□□□□ -0.05
SMIM12-203ENST00000426886 TRIM17Q9Y577 477 aa14.76□□□□□ -0.05
SMIM12-203ENST00000426886 WDR46O15213 610 aaKnown RBP14.75□□□□□ -0.05
SMIM12-203ENST00000426886 BCRP11274 1271 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 LACTBP83111 547 aaPredicted RBP14.75□□□□□ -0.05
SMIM12-203ENST00000426886 COG2Q14746 738 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 Q3C1V9 767 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 KCTD1Q719H9 257 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 NCOA7Q8NI08 942 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 RBPJLQ9UBG7 517 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 FMNL1O95466 1100 aaPredicted RBP14.75□□□□□ -0.05
SMIM12-203ENST00000426886 CTGFP29279 349 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 SLC1A4P43007 532 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 PSMC4P43686 418 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 IKQ13123 557 aaPredicted RBP14.75□□□□□ -0.05
SMIM12-203ENST00000426886 RCSD1Q6JBY9 416 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 ATG4CQ96DT6 458 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 TCP11L1Q9NUJ3 509 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 TNKSO95271 1327 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 ADGRA2Q96PE1 1338 aa14.75□□□□□ -0.05
SMIM12-203ENST00000426886 SPDYE16A6NNV3 312 aaPredicted RBP14.74□□□□□ -0.05
SMIM12-203ENST00000426886 REC8O95072 547 aa14.74□□□□□ -0.05
SMIM12-203ENST00000426886 ENAHQ8N8S7 591 aaPredicted RBP14.74□□□□□ -0.05
SMIM12-203ENST00000426886 HOXC10Q9NYD6 342 aa14.74□□□□□ -0.05
SMIM12-203ENST00000426886 TOP1P11387 765 aaKnown RBP14.74□□□□□ -0.05
SMIM12-203ENST00000426886 GCLCP48506 637 aaPredicted RBP14.74□□□□□ -0.05
SMIM12-203ENST00000426886 SLC4A3P48751 1232 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms